Array 1 1283485-1283693 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050253.1 Zophobihabitans entericus strain IPMB12 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1283485 28 100.0 32 ............................ TCCTCCAAGAGAGGAGAGGACAGGGTTTAAAC 1283545 28 100.0 32 ............................ AAATTAACAAGGGGAATGTTACAGCAGCTATC 1283605 28 100.0 32 ............................ TATAAAAAAAATATTAATTTCGGAATTTAATA 1283665 28 82.1 0 .............C......C...T.TC | A [1283685] ========== ====== ====== ====== ============================ ================================ ================== 4 28 95.5 32 GTTCACTGCTGCATAAGCAGTTTAGAAA # Left flank : ACTTAATGAAGAGCGTTTAGCCTGGGATAAAGTATTAACTATTCTATATCGTTATGCACAGACCACTCAGGAACATCTGGAAAATAAACCTTTCTATCACTCATCTCGTATTAAGCAATGGCTTACTTATTTAAAAGTTGAATATCCGCAAGCAGTGACGTTATTGCAAGAAATCAGAACACTAAAAGCCCAACAAGAGATGATTGATGCTCTGGCTAAAAGAGTAGAACTATAATTATTTTTATTCGGATATCTTATTACTGAAAATTATATTTGTTGCTGTGATGTAAGAATAAATATCCCCTTGATTCTTTGCTACTAACGATTAGTCCAAATATATTCTGCTAATAAGAGCAATAACCCTCTTCAAACCCTTTTTATTTTTAATTTTGTAATTATTTGATTTTATTGAATATAATTAAGATATGGAAAAAAGGGTTATTTAATGGGAAGATATATCCGTTCTTTAAAAATCAGTCCTTAGAGAAAATTAAGCTCTA # Right flank : CACCAAATAAAAAAGCGCTGATTAACCAGCGCTTTTCTATTAACTATTACTTGGGAATCGTTATGGTTCCGTCACTTACTTGAATAAGATTCGCTGGTCTTGGTGATTGCAGAATTGGAGTGAAATTCTTTTCTGTGGCTGCTGGTGCAAATCCTGGTCTTAGCCCACCTCTTGGAACTGTATGCACCACCTGGCTGTCAGGCAAAGATGTCCCTTTAGTCAAGTTACTCCATAACCAGTCGGCAGCAGATTCACCATAATAATCAATCGAAAGTAGCGTATCATCAAATGGAATTTTAGCTTCAAAATAGCTGCTGTTGGTAATTTCAAAATAGCGTAATTTACTTGCTGAACCTTCAACATAGCTATTTAACGCCACATAAGGACGAGCAGAGTAATTTGGCAGTACCTGAGAATTATCACGACCATGAACAATAAAAGTTGTAATATGATTTAAATAACCGGAAGACAGAACCTGATTTAAACCTTCCTGTACGCGT # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCTGCATAAGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //