Array 1 141325-140015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQZR010000003.1 Leucobacter sp. NC76-1 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 141324 29 100.0 32 ............................. GGCTCATCCCCGCGATGGCGGGGCACAGTGCA 141263 29 100.0 32 ............................. TTCTACCCGGTATACGGTTCGTGGCTGTTTGT 141202 29 100.0 32 ............................. TGGCAGCGCACAGGATGATCGACCCAATCACT 141141 29 100.0 32 ............................. CGGTTCGTGTGCGTCGCTCAGGGCGACGACGA 141080 29 100.0 32 ............................. CCTGAATGGCGGGAGGTGCTTCATGTGGGTCA 141019 29 100.0 32 ............................. GTGGCGCCCATGGCAAGCAAGGTCGTGCGGTT 140958 29 100.0 33 ............................. CCTGAGTACCCTGATATTGAGATACACGAGCTT 140896 29 100.0 32 ............................. GCAGTCACAAGCATCGGTAGACCGACGCGTGA 140835 29 93.1 32 ..........................G.A ACTCTGCGCCGTTATCAAGAGAACCTCGCGGA 140774 29 100.0 32 ............................. GTGACCTTCTGGGTCGAACGGCATCACTTTGT 140713 29 100.0 32 ............................. CCTAGATGTGTTGCTCCCGCTGGAATTTTCAG 140652 29 100.0 32 ............................. GCGGCCTACAAAAGCTATGTCGCAATTCAAGC 140591 29 100.0 32 ............................. GCCGCATCCGCAGCCATACGCAGACCCTTCTC 140530 29 96.6 32 ............T................ TACTGCTCTCACTGGTGACAGGACTCATCGAA 140469 29 100.0 32 ............................. CCGCATCGAGTATCTCCCGACTGCGGCACCCC 140408 29 100.0 32 ............................. ACCTCGTTAAAGCCGGGCCAGATCGTCACCTC 140347 29 100.0 32 ............................. CGCTCAAACTTGGCGGTCAACCCGATCCCTTT 140286 29 96.6 32 ...C......................... GGCCGCTCTTGCTGGGAAGGATCGATGTACCG 140225 29 100.0 31 ............................. TTTACCTTCCGAGGTACAGATACTGACCCCC 140165 29 100.0 32 ............................. TACTGGATCATGAATAACGGAACGGTCATTCC 140104 29 89.7 32 ...........G.....G......G.... CGGGGAGCCAGATGATTCGTCACCGGTTAGAA 140043 29 82.8 0 ...........G.AT...A..G....... | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.1 32 GAGTGCCCTGCACGCGCAGGGATGAGCCC # Left flank : GTGAATACATTGCTTTTGCTACACGAAGCCGAGATCTTGTGGTCGAGACAAGTCGTGCCTGCGCTTCAAGCAGTTTTGAAGATTTTGCGAGTGACCGACCATGGCAGTAATACCGTACGCCCTGTTCACCTACCCAAACGACCGTTGAGCCTGATTCTGCAATAAGTACCATTGCTTGTTGCGTGACTGTTGTCCCTGGGCCGAGGAGGAGGGCGCCGAGTGAAGCGGCAGGTATGTGCACAGTGCCGCGTTCATCAGTGGCGGTAATCGCATTAGCATCTCGACTCACGATTGACCGTTCAAGGTAAATAAACGTTAATCGGTCGCGTGCGCGAACGAGCTCTGGAAGTTCAGGTGGACGTATGCCAGGAATTTGCGACATTGCACTCCCCTTGATGGAGATAACCGGTTTGTAAGAAGATACCCTAGTCAGGCGACCGAGTGTTGAAACTAAAGATTTTTGAGCTAGCGTCACTCTTGCCGCCCGCTAAAGTTCAAGT # Right flank : CGGATACGCTGCTCTCGGGGTAGCGCGTTTGTGAGTGCCCTGCAAGTGCAGGGAGTTGCACGCGCTCGCTTGATGGCTGGCGGCTCGCAGTTGTCGACTGACGGTTTTCGGCTGCCGCTCGCCGCGTTCTTGCCTGCGTTTTTTCCGTTTACTTGACGAAAAGCAGGGTGTTCAGCCAGAAACACCCTGCTTTTCGTCAAGTAGACCGCGTTCGGGCCCCGCGCTGGCAATCGACCGCCCGGCCCCGACCCGGGACCCTGGAATCGCTCACGGCGTCTTCCGTGGCCGCTACACTCAGCAAGAACGCCCCTCGCCCTGCGCGCAGAAAGGAGCCCACAGTGCCCAGCTCGGGAAAACGGCGCAAAGCCGAGATTGTGGATCATCGCGCCAGAGAGGCGGGTCCCGCGCTGGTCGGCGCGAGCGTTGAGCCCGTACCCCGACGCAGGCGAACCGTCACCGAGTACATCGATTATTCGATACGGTGGTCAGCGGCATTCAAC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTGCCCTGCACGCGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 152237-150988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQZR010000003.1 Leucobacter sp. NC76-1 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 152236 29 100.0 32 ............................. ACGGGTCGAACGCGCTGAAAGGCGTATGCGGA 152175 29 100.0 32 ............................. GCACCCCACCCATCAGGCCGGACCGTCACTGC 152114 29 100.0 32 ............................. CCTGCTGGGCGGCGTCCACGTTGACCCGGCGA 152053 29 100.0 32 ............................. CCGGCGACTGTCACTGAAAACCCTGACGGGGT 151992 29 100.0 32 ............................. AAGGAAGAAGGAAAGACATGGAAGAAATCATC 151931 29 100.0 32 ............................. CATTCACCGTGACCTGCGACCCACCATGGATC 151870 29 100.0 32 ............................. GAAATCTGTTGATTCTTTGCCCTCGATGAGTG 151809 29 100.0 32 ............................. TAACGGCGACTTCACTTTCAAGCTCGAAACCT 151748 29 100.0 32 ............................. CGCAAGCTCAAAGAATCACTGCACACCCACCG 151687 29 100.0 32 ............................. GCCGAGCAGCGCCCCACCAAGCACGAGCAGCG 151626 29 100.0 32 ............................. CTGAGGAGAATAGACCGGCTTAGTCTGAATTC 151565 29 100.0 32 ............................. AGTCCGTCAGATGTGATGCCGTAGATTTTCGC 151504 29 100.0 32 ............................. GGCAAGACGTACGAGATTGACTGGCCGAACGA 151443 29 100.0 32 ............................. TCCGTCGTCATCGCTCACCACCTCAGCATCTT 151382 29 100.0 32 ............................. AGCTGCGGAACGTCATCGGAGTAGACAGTTCT 151321 29 100.0 32 ............................. ATTTACCGGCGCTGCATGGAATCAGGATCGTG 151260 29 100.0 32 ............................. GACCGAATCCGTTCGGTTGACGGTGGAGACGA 151199 29 96.6 32 ................T............ GCGTTGTTGACATTGTTTTGCGGGCAGACTCG 151138 29 100.0 32 ............................. TCGTTCACCGAGGCGACTAACCCCCGCCGCGA 151077 29 96.6 32 ..........G.................. GACGAAGATTCGTGAGGTGTCAAGCAAATGCA 151016 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GAGTGCCCCGCACATGCGGGGATGAGCCC # Left flank : GCCCCGGCCCCGACTCCGGTGAGGGCCCCAATGGTGGTGGCCATGCTCCCTCCGGGGCAGGGGAAAACGGAGTGCCGGGAGCAGGCTCTGCGAACCACAACACCGGCCAGGGCCACCTTGCTCAAACCGGTGGGGTAGCTTACGAAGCGTTGCTGTTGGCGGCGATGATGCTTCTGACTGGAGCTTCGTTGCTGGTGATGCGGCGCAGTCGGCAGACGCGCGTGCGTCGCTAGCTGACGAAGACCGGGGCGATGATCCGCTGATTGCCTCAGGGAGCCATCATTTCTGATCCACTTGACGAAAAGCAGGGTGTTTCTGGCAGAACACCCTGCTTTTCGTCAAGTAAACGCGATCGAGGCTAGTGTGAGCCGCGATACAGCTTTGCTGCCTGATAGGGAGGAGTGGGAAGTGACATCCCTATGAAATTATTACTTCAGAGTAAGTGTCGAAACTCAATTTTTTAATGGATTATTTTGCTCGAACGCTAGTGTTTCTTATGT # Right flank : AGCTGCGCGAGTCTAAGACTTAGACAGTCCATGGGTGCCGGGCAATATGGGTGCGGGCCTGGGGATACTACTGGTTTCCTTAACTTCGAAGGGTGCGCTGGCATGAACTCCTAATGTGCATGAAACTCTAGAACGGAATATCAAAGGAACCATGCCTGCCGGCATAAATCGTATTTAGGGTTTGCGAAGGGTAAGCATGCCGTAACCATATGACTTTGCTCTCCCGATTCCTCCCACCAAGGCGCGGCGTAGAGCAAGATCATCAGTGACGATGAGCCGCCCCTCAAAAACGGCCTTTCGAAGTGTGACCTTTTGGCTCGGTGCACCTTCGCGGTGCTTATAAGCAACCTGCTCTCTATTCTCCACGACTCTTAGATCGGTGATAGGTGCGTTGAGACCGGGAAAGTCAGTAACCTCATGAAGCTTGAAACCCCACTGCTCTGTACGCTGTTGAAACCATGTGATCTGTTGTTCTTCAGTCACCAAGGGAATGATGGTTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTGCCCCGCACATGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //