Array 1 29401-28929 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHLDU010000029.1 Clostridium sp. DSM 17811 contig00029, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	============================	======================================	==================
     29400	    28	  75.0	    35	....C...A.AG...A..GA........	TTCATTATTGCTACATTCCAAAGAAATTAAAGCAG   	
     29337	    28	 100.0	    35	............................	GCTATTACTGTCACAGAACAAATAAGTTAATTCAA   	
     29274	    28	 100.0	    35	............................	TTTATTATTGCTACATACCAACTGAATTAAAGCAG   	
     29211	    28	 100.0	    35	............................	TTTACTACTACTACATTCAAAATAAGTTAATGCCA   	
     29148	    28	  89.3	    35	C...C.......C...............	TTCATCACCGCTACAGTCAAACTCACTTAATGCAC   	
     29085	    28	  89.3	    38	.G..........C..............C	TGAATAATTACCGCTACAGTATAAAGAAGTTAATGCAG	
     29019	    28	  92.9	    35	............C........C......	GTTATTTGAGAAACACTCTAAACTAGTTAATGCCA   	
     28956	    28	  85.7	     0	C...C.......C......C........	|                                     	
==========	======	======	======	============================	======================================	==================
         8	    28	  91.5	    36	TATTTTTACTTAAATCTAATGTTGTTAA	                                      	       

# Left flank :   AAACTTGGGTTTAGATTTCATAACATGATAACTCAATATCAAGAAAATACAATGAATTTGGAATAGCTCGTCTTGAAGATAAAAGTGGTAAAACCTCATCACCTATGTGAAGTCATCCCCAAAAACATTATGATTTTTCTGAAGAAGAATCAAAAGATGATGTGCAAGTTATTAAATGTATTGAAATGCTTTTTATATAAAGAATTATAGGAGATATGGTATAGGGAGAATTTTATGGGTTTGTTTATTAATGAAGCGAAAGTGCTGCCTCCCATCGACTACTTTATCAAAGTAGTCGATGGGAAGTTAATTTACATTACGGTGTTTGTTCCATCGCTTACAATTAAAATCTCCTTTCTATAATTTTTGCATTAAAAAAGACACTATTTCTAGTGTCCTAATTTTATAATTCTAATTTTTAATCGTTATAACTAAATTATCGGTGGTAGTTTTTTTATTTGAATCTGTGAACTGAGGTTTATAATTTGAATTATCCCAAG
# Right flank :  GTTATTTGAGTAACAATTTAAACTAGTTAATGATATAAAATACTCAATACCACTTAAACTACTTATATTTTTATCAGATACATCTAGTGTTTCTAAGTTTTTCACATCAGAATAAAGTATTGGTTCTGAACTAGTTTTTCCTATGAGAGTATATACTGCATTTCTAAAGTTTTCACCAGTAAACTTACTTGTTATATCTGTATTATCACTAATATTACTGGAAACATTTAATGTAGCTGATACAGTTATATTATTTGTATTCATTACTCCATATGGCATTGTTAATGTACCTGTAAATGTATATGTTCCAGCAACTGTTGTACTTGCTACCTTATTCCATGTTACATCTAAACTCTTAGTTGTTCCATCTGATAACGTTGCTGTTGCTGTTGTAGGTAATGTATAAGTATCACCTATATTCGTTGTTGTAGTAATTGCACTTACAGAACTAACTGTTAAATTTGCAACTGTCGGATTTGTTATAACTAAACTATCTGTAG

# Questionable array : NO	 Score: 2.52
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TATTTTTACTTAAATCTAATGTTGTTAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:85.71%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [9-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.41   Confidence: LOW] 

# Array family : NA
//