Array 1 1157716-1154580 **** Predicted by CRISPRDetect 2.4 *** >NC_013515.1 Streptobacillus moniliformis DSM 12112, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1157715 36 100.0 30 .................................... AGATGACAATAAACGGGACTATGACGCAGA 1157649 36 100.0 30 .................................... GTAAAGGTATGTTTGTGACGTTAACATATA 1157583 36 100.0 30 .................................... AAAAATCGAAGGAAAAACAATAAAAATTAA 1157517 36 100.0 30 .................................... TACCTGGTTGCGCTGTCGCGCCGCCTAAAC 1157451 36 100.0 30 .................................... AATGGTCTTTGAGGCTGGAGCATGAGCTGA 1157385 36 100.0 30 .................................... AGATGACAATAAACGGGACTATGACACAAA 1157319 36 100.0 30 .................................... ATTTTTTTTCGAACTCATATTTTTTTAATT 1157253 36 100.0 30 .................................... AATGTTCAATTAAACGAAAGTTTCATAACG 1157187 36 100.0 30 .................................... AAAAGGAAAGAGATAAACACGACACTACTT 1157121 36 100.0 30 .................................... AAAAAGAGCGGGATTTGTATGAAACCGAAT 1157055 36 100.0 30 .................................... CAGAAATTTGGGGAAAAGGATTGATCGATT 1156989 36 100.0 30 .................................... TATCAAAAGATTTAATTCATGTTAATTCAT 1156923 36 100.0 30 .................................... ATGTACCAATTTATAAATATGAGTTAAATT 1156857 36 100.0 30 .................................... TTCCTTGTTGCGCCGTCGCCCCCGCGAGAC 1156791 36 100.0 30 .................................... AAAGAAGAATTTATTAATATCTTTTTACGA 1156725 36 100.0 30 .................................... ATTTATAAACAATTTGTTGCACGACTTTAA 1156659 36 100.0 30 .................................... TTGATAAAGAGGGAAACATCTTAAAGAAAG 1156593 36 100.0 30 .................................... TCAAAAAGCATAAATTGGGACACGGAAGAA 1156527 36 100.0 30 .................................... TTGATAAAGAGGGAAATGGATTAAAAAAAG 1156461 36 100.0 30 .................................... TTTAAAAATAATAATTAAATCCTAGTTTTA 1156395 36 100.0 30 .................................... ATAATGATAATATAAAAAAACTTGAGTTGA 1156329 36 100.0 30 .................................... TGTTTATGAACTGAATTATGAAAAGGAAAA 1156263 36 100.0 30 .................................... TACAAAATAACATGGAAAGAATTAAACAAT 1156197 36 100.0 30 .................................... TTTTTCTAATGCTTCTTGTTTCTTTTTAAT 1156131 36 100.0 30 .................................... CAGTTAAAAGATATGGTGGGTCTTTAAGAT 1156065 36 100.0 30 .................................... TTGATAAAGAAGGCAATGAACTAAAGAAGG 1155999 36 100.0 30 .................................... TCAAAAAGTATAAACTGGGATACAGAAGAA 1155933 36 100.0 30 .................................... GGGATAATAAAGAATTAGTATTGTTAGAAG 1155867 36 100.0 30 .................................... CAAACATCTTAAATAATAAAATGATAAAAA 1155801 36 100.0 30 .................................... CAACTCCATAGAATACCTTTCCAATCATAT 1155735 36 100.0 30 .................................... TCAAAAAATGAAGATTTTATTGTTAGAAAG 1155669 36 100.0 30 .................................... CACTAAATAAACTTAAAAATTTAAAATTAA 1155603 36 100.0 30 .................................... ATACAACGCCGATAACACAAACAGCCCCTA 1155537 36 100.0 30 .................................... AAAGTGAAAGCAAAAGTGAACATGACACAT 1155471 36 100.0 30 .................................... CATATCTTAAAATTTTAGCATTTTCTAAAC 1155405 36 100.0 30 .................................... AATTTGGAAAAGAAACAGGTTTATTGGTAA 1155339 36 100.0 30 .................................... TTTTAATACGGCTAGAATAATGCAACTCAG 1155273 36 97.2 30 ....A............................... TTAAATTTTGAAAATCCATTTGTTTTGTGA 1155207 36 100.0 30 .................................... TAAAAATGAGATTTGGAGTTTCACCGAACG 1155141 36 100.0 30 .................................... CGCTTTTCTGTCATATTCGTTTAAGTTATT 1155075 36 100.0 30 .................................... TACAAAATAACATGGAAAGAATTAAACAAT 1155009 36 100.0 30 .................................... TAGTGTCTGAAAATATTTTAAGAGATAAGA 1154943 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1154877 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1154811 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1154745 36 100.0 30 .................................... TACTAACAACCTTTTATGAAGGTGACAGTG 1154679 36 100.0 28 .................................... TTTTTTAAAAAAAGGCTTAAAAATCTGA 1154615 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 48 36 99.5 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACCAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //