Array 1 2292128-2292969 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073683.1 Paenibacillus sp. S25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2292128 32 100.0 36 ................................ ATCTTCAGCTTTTTTAAAATCATCTACACTGTCGTA 2292196 32 100.0 33 ................................ TTGGCTGTAATATACAACGCCTTCACCGTCTAC 2292261 32 100.0 35 ................................ GTCCAAACCCAAAAACTCTTAGCAGTTACCATGTC 2292328 32 100.0 36 ................................ CCACTGCATGACGACAATAGGGTACAGTGCAAAACC 2292396 32 100.0 35 ................................ ATTTGTTGCACTTAGGAAGTTTTCTGGAGGATTGC 2292463 32 100.0 36 ................................ GATCTGGTTGTCCTCGACATCCGCGGTGGATATAGA 2292531 32 100.0 36 ................................ ATAACGGGTAACGATGGGGACGCTTTGCAAATTTTC 2292599 32 100.0 36 ................................ TATACCTGTTGCCTTTTCTCTTGGCTGGAAACTTAA 2292667 32 100.0 35 ................................ AAAAATAAAACATTTGGATCTTTTGATGTATCGGA 2292734 32 100.0 34 ................................ TTCGAAAAAATCAATATCGAGCGGACGTGCTATT 2292800 32 100.0 38 ................................ AAGTTCATTACAATTTGTAGTCCGTCCATACCATAAAG 2292870 32 100.0 36 ................................ GACTATTCAGGCAAAGCTGTCGGAAAATTCGACTAC 2292938 32 87.5 0 .............C....AT..........G. | ========== ====== ====== ====== ================================ ====================================== ================== 13 32 99.0 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GTTTCGTATTCGTGTGAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTGCCATCCCCGTCAAGTTTCCCGAAGGAGGACAACCATTGGCAGATGGACCGGGTCAACCCGAGCAGGTAGCTGATTTGGTGACATTTTTGGCCTCAGATCATTCGCGTCACATTACTGGCGCACAAATTGTCATTGATGGAGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATTCTCTGGGATGGAGAAATGTTTTGTGGTATCCTGAGTGTATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTGGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTAGCATCGTTTTTTTTCGAAAATGTATGGAATTGATATTATTAGGGTATTAATTCCTTCATTTTCGCA # Right flank : TATCTATAGTGTTCGCAACCTTGCATAACAACTCTCAGCAGAATTTACATGATTGGAGCCAATATATAATTTGTTTTATGAACTTTAAGATTATTAGTTTGGTTCTCTCTAAAAATACTATTTCCACATGACTATAAATAATATTTGTTTACATAACGAGAATAGATCTAATATGATTAGTAAGTAGAAGAGAATCTAGTATTTTAAGCGGAATACAAGTCTCTTCACAATAACCACCTAAAAGTCATAAAATGAATATAGAGCTATGGGTGTGAAACCGAAATCCTTGAATTAAGTAGATAAGAGAGGAAAGGAAGAGAAATTACAACGCGAGGACAATTATATTAGCATTATCTATGAATTCACTTAACAACGGGAAATATCCAAGTGGGGATTGTAGATGCTGTCGCTATTTACCTTAAGGCACGATTATACAGATTAAGTATTTGCTTAAAGGAGGAAAATAGATGAATTTATTATTCATTCCTGGTCTATATTTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2302089-2303360 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073683.1 Paenibacillus sp. S25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2302089 33 100.0 34 ................................. ATCTATCCATGTGGTCGTGTAGCTCCAAGCCTTG 2302156 33 100.0 36 ................................. CCTCCTTATACTGCGTTTATAAACTCCGTGACTCCG 2302225 33 100.0 35 ................................. TGCTTCAAATAGATATCGACTTTCTTATTAACAAT 2302293 33 100.0 37 ................................. CTTATGCTCCGGTATAATAATGCGCGAGCTTTCCCAT 2302363 33 100.0 35 ................................. TTCTAACATCTCCGCCTCGTACCCGCTGACCTCTC 2302431 33 100.0 36 ................................. AGCCAATATTGGAGCAGACATCTCCCTCGGGAGACA 2302500 33 100.0 36 ................................. AGGCCCACTTTCTGCTTGTACTCTGCAATTCTCGTA 2302569 33 100.0 35 ................................. CGATCTCTCAGTTCATCATCATCTACAATAACCAA 2302637 33 100.0 34 ................................. GAGCGTTCAAGCGCTCCAGTCGTTCCCGAATGTG 2302704 33 100.0 38 ................................. TGGCAATAGGCAAGGTATGAAGCTTCACTGTTTTTACC 2302775 33 100.0 36 ................................. TTGTGTCGTAGAGGAGTTTTGCGATACGTAGTGATC 2302844 33 100.0 34 ................................. ATTCGGAGTACGAACCAGTACCGAAGTCGGCTCG 2302911 33 100.0 37 ................................. AATCCAAACAAATGAAAATTTGCCCCATGAACTGCCC 2302981 33 93.9 37 ..................A......G....... ATGTTTATTGGCATCAATGGTCCTGATGAACCGGCAC 2303051 33 100.0 37 ................................. CTCTATCCCCTCTCCTTGGGTAGCTATTAGAGCTGCT 2303121 33 97.0 37 .....................A........... GTAAAGAAAATGCTTCGTGCAGAAAATACACGCTATG 2303191 32 87.9 37 .........CA.G.-.................. AGGTAACAGAGATGAACCAGTATAGTGTACCGAAGGA 2303260 33 93.9 36 ............G.........C.......... TTGCTAGGACTTGAAGAATTAACAGTAGAAGCTAAA 2303329 32 90.9 0 ......T...A.....-................ | ========== ====== ====== ====== ================================= ====================================== ================== 19 33 98.1 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAGCATATAGGGGCAAAGGAAGCTTACGATATGGAAAGCCCACTAATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAATCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGCATTAGAATGCTGTCTATGAGAAAAAGTCAATAGTTGATACAAGCCTTTTTGACATCAGTTTTTGCGATAATGTGTGGAATTGATATCATTAGGGTATGAATTCCTGCATTTTCGCT # Right flank : TTTGAAGATACTGGTGAAAAGGGACAGCCTCGTACGTCGCACTCCATGTGAGTGCGTATTGGAGAGGTAGCATATTTCATAAGGAGGTTTTGTATTGGCTCCGGCGCATTATCGCTACTTTTTGGAGTAAGGAAGAAGACAATGACGCTTTTGAGGCAGGTGTTCAATCTCTTCTAATGAAAATCTCAGAACAATACAAACTAACGTATGGCGAAAAAACACAGCTGCTTGCTTCAATGATACTAGAGTATTCGAAATACGTAATAAGATGGGAACGTCACAGTACAATGGATGAAGAAGGAATGTGGGAGTAATTGAGACAAATGCGGCACTGGAGTTGAACGAACTGGACTTGATAGAGGAGAGATTGAAATCTTCTGTATGGCTACATAATTATACTCAATTCACAGCCCTAGGACCTATTAGCACATTTGTCTGAAAAGGCACATATAAGTTATTACCTGCCAGTCATTATTTATATTTTTCTAATACACTTTTCT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 2308065-2308903 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073683.1 Paenibacillus sp. S25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2308065 32 100.0 37 ................................ TCAAACGGATTTCCCGATTTTATTAGCCTGGATTCAG 2308134 32 100.0 34 ................................ TACCTGTAAGAACTATTATACAGTACAAAAGGCC 2308200 32 100.0 36 ................................ ACATCCACACCGATGATAGTGCCTTGGAGCTGGAAC 2308268 32 100.0 34 ................................ ACATCCACACCGATGATAGTGCCTTGGAGCTGGA 2308334 32 100.0 34 ................................ CCCTGCCCAGGCGCGAAGTCCAATCAAAGCCGTA 2308400 32 100.0 37 ................................ CCTCCTTATACTGCGTTTATAAACTCCGTGACTCCGG 2308469 32 100.0 35 ................................ TGTGCCAGAGCGTAAAGGACGTAGCAACTACGCCA 2308536 32 100.0 35 ................................ TGTGATTTCATTTATTTTTTGCTTTTGTTGGTCGA 2308603 32 100.0 35 ................................ GACAACGGAGACGTGAATATCAGAACACTTTTTGA 2308670 32 100.0 33 ................................ ACGTCATAGTCAAATGACTTCGGCTGCTGGGAA 2308735 32 100.0 36 ................................ TAATTCCTTTTGCAAAGCGGCTATACCATTGCTTTG 2308803 32 100.0 37 ................................ GACAAATGATTAACGGTAGCTGCACCGATTTTATTGG 2308872 32 96.9 0 ........T....................... | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GTCCTGATTTTGATTAACAAGAAAATGATTAGATAAAGGATTTTACAAAAAAAGAAAATGGGATGTCATGATGAAACGATGATATAAGGAAAATCGTAATGAAGGCATGGTACAATGAAACAGGATAGGATTATGTATCTCTATTTGAATGTATTTTGGATTTGACCCAATTTAGACGTTTAAAGTATGAACTAGAAGAATTAATAGACGAAAGAGAACTTAGCCTGCATTTCTACAATTTGGGTGATAGCTATAAAAAGAAGAAGAGCATATAGGGGCTAAGGAAGCTTCCAATGTGGAAAGCTCACTGATTTTATAAGGTGCGAATGTGAAGCTCACATGAAAACCCCGGGTCCTTCGCACCTCGGAATTTGTCGAAAAGTATAGAAAATGCTATCAGTGAGAAAAAGTCAATGGTTAATTTAAGCCTTTTAGACATTGCTTTTTTCGAAAATGCATGGAAATGATATCATTAGATAATCAATTACTGCATTTTCGCT # Right flank : TATGATGAATGGAGGACGTCCTCAAGAAAGAAATAGGCGCACTCCATGTGACAATTGACGATGCGGCAGGATTCACGGTCAGTCGTTACGGCATATGGTTTTGTTTGACTGGTATGCTTTGCATAGTTCTCAGGGCTTCAGCTGCAGAAGGAAGAAAATAAAATCGAAGTGAAACGATCTTTGTGATATGTACAATGCTGGCGATGGGCGCGATGAGAGGCAATGATGCGGGGGAATGAGGCAAGAATATGAGGGCGTACAGGGGATAAAATGCGGAAGAACCACCGAAGGATGAAAAATCCAGTGCGGTGGTTCTTTTTTTTCACTCGTCTTGTATGCCATCATTATAGGGGGAGGGGATGAAGGATGTTCCAGGATTTCAAGCTCGTCAGTGACCGCCCGTTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTGCCTTCCACACGAGAAATGAGCGTTCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2313387-2314364 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073683.1 Paenibacillus sp. S25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2313387 32 100.0 37 ................................ TCATTAAAAACTATTGACTTTTTGAAATAATCTGTTA 2313456 32 100.0 35 ................................ TTCGGCCTCCGGTATGGTCTCGGCGGTCTGATTGA 2313523 32 100.0 35 ................................ GAATTCTTCATCCTCTTTGATATCCAGTAAATAGC 2313590 32 100.0 36 ................................ TATAAAGGAGCGACAAGATGGGGGCGATAGAGCAAA 2313658 32 100.0 36 ................................ AATCTGCTGACCAAGCTGCTGCTGACAAATTCGATG 2313726 32 100.0 34 ................................ AGTGGCAGTCGTCAAGGCTGTGCAGGACTATATA 2313792 32 100.0 35 ................................ TGACTGGTATACTGATTGCAACATCGACAGCCTCT 2313859 32 100.0 38 ................................ TCTCACGACAGTAACGCCCGTCACGATCCAAAGATTAC 2313929 32 100.0 34 ................................ CTATCTGACGGTAAGCATCATTGTCTGTCCCAGC 2313995 32 100.0 33 ................................ TAACTAACCGAGCACAAAAGGCAGTAGATAGAA 2314060 32 100.0 37 ................................ CTCCTGCTCTTTTACGTACTCAATAATATCGTTTGGC 2314129 32 96.9 35 ..........G..................... CTTCATTGGAGCAAGAAATTCAAAGTGCTGTTCCG 2314197 32 100.0 36 ................................ CTCCTGCTCTTTTACGTACTCAATAATATCGTTTGG 2314266 32 96.9 34 ..........G..................... CGACCTCATTGTAGGCTATGGCCTCAGATTCAAC 2314333 32 96.9 0 ..........G..................... | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 99.4 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ATTCGCTGCTCATATGCAGCCTCGCTCGTCGATTTGGAGAAGTCGCTGGAACGGATGGGAAGGTTTATGCAGGTAATGCAGCCGGTATGATGAACAGGGTTAATAACTCAACTTTTGCCGAACGTCTTCATAAAATATTTTACAATACCTTTATGATTTTCGAAGACATAAAGGTATTTTTCTGATCAATGTAGTGGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGAGTTAACTGGCAGAACTGGCAGAGGTGAAATAAGTTCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTATATCGAATGTGAACAAATTTTAAACGATCGCAAGAGGATGAGGTAATATTAGATGCGTTTTTGCCAAAATAACGTTAGAATGTTACTTAAATAGGGGGCATTTGACCCATTTTCGCT # Right flank : ATTAAAGCGCTATGCAGTGATTTTGTTGGGCTACGCAATAGGTATAGGGTTATTTTACGCTTTGGGTTATAAGATGAGCGCTATGGGAATCTATGCAATTTTGACAGGAATTGTGACTGGAGAAATAATCAACTTCGTATTATCAAAGCGAGAGAAATGAACCTAGGTATCCCCTGATTGCATCAACATCAGGGGATTTTTCATGTAATTAAAAGGTACAACAGAGTTTCTGCATGGGACCTCTATATCATTACTGGTGAGAATCCACATGGGGAAATGAATTAGTCATGTCAACTCTGTGAAACCTTTTACTTGGATCAACCCAATCATTTCAGGATGCCACTCGTCCATCATGTCCCAATATGTGTAAGTTATGCTGAATTTTCGCTATAAACATTAGTTGCATAATATATTGACAGATGGTTAATTATGGAGAAGAATAGAGGGTGATTTTTAAAATAATGGAATTTTTATGTGAAGGGTGGTTATGACTTGAAGCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTGTATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //