Array 1 9926-10491 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMIN01000028.1 Enterococcus faecium strain UCN73 UCN73_contig_29, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      9926	    36	 100.0	    30	....................................	TTTACCGATTGCCAACACTTCTAATCCAAA	
      9992	    36	 100.0	    30	....................................	AACTTTTCCATCTCTACCACCCTCTGGGAA	
     10058	    36	 100.0	    30	....................................	ACAAGACTATGTTAGTGCTGCTTAGAGCTG	
     10124	    36	 100.0	    30	....................................	CTTATATGACAGCTTATAAAGTGTTATGTA	
     10190	    36	 100.0	    30	....................................	ATGCCTCGAGTGCTGTCGTGTGTGTGCTGT	
     10256	    36	 100.0	    30	....................................	CTTTTCCTAATAATTTACAATCATCAATAT	
     10322	    36	 100.0	    30	....................................	TTTAATAGTTAACGGAAATCACGATCGCGG	
     10388	    36	 100.0	    29	....................................	TTGATTTGTGTCCTCGATTTGCACTTTTA 	
     10453	    36	  91.7	     0	.........................A....T....A	|                             	AC,G [10481,10487]
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.1	    30	GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC	                              	       

# Left flank :   GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATCGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAAATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG
# Right flank :  AACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//