Array 1 148730-147561 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSR01000003.1 Acinetobacter wuhouensis strain WCHAW060023 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 148729 28 100.0 32 ............................ AAATGTGAAGACGCCAAGCAAATGCGTTGACG 148669 28 100.0 32 ............................ AGTTTATCGAACTGGGCACGGCTATATTTTGT 148609 28 100.0 32 ............................ TGATAGCCCTGATTCTTCCGATGATCCAGACG 148549 28 100.0 32 ............................ AGATAAAACCAATTCTTCACAACCTTTGATTT 148489 28 100.0 32 ............................ AAAGGCAAATAGCGGTCGGATGATTTAAGCTC 148429 28 100.0 32 ............................ GACTCATCCCATTTACGGTCATTAGTCTTATC 148369 28 100.0 32 ............................ TGTATGTTCAAAGCCCATCTTCTTATAAAAGT 148309 28 100.0 32 ............................ GCAACTCATTATCTAAAAATAAAAAGACAGTT 148249 28 100.0 32 ............................ AAGTGAATCTAAAGCTTGACCCGCAGGGCATT 148189 28 100.0 32 ............................ CCGTGGACAGGGATTAGAACAACAGACTGTAT 148129 28 100.0 32 ............................ AGCTATGCCAATTGCAATGGTTATTGATGCAA 148069 28 100.0 32 ............................ AGATAAAGAAAAGAAATTCAAGAAGATTGATG 148009 28 100.0 32 ............................ TGAAGACGATAGCGAGCAGTATGGCGACCAAA 147949 28 100.0 32 ............................ ACTCAACAAACAGCGGCGTCCACCGCAAAGTT 147889 28 100.0 33 ............................ AAACGATGTTTTAAGTGGAAGGGATGAAGAAAA 147828 28 100.0 32 ............................ ATGCTTGCTAATTCAGAATCATTGCCCAATCG 147768 28 100.0 32 ............................ ACGTACCGATGATGATGTCGAAAATGCGATTG 147708 28 100.0 32 ............................ GTATTTAAAAGGAATCTGTAATCTTGTCGAAA 147648 28 96.4 32 ...........................G ATACGTAGACTGTAGCGGACGGAGCACCCCAT 147588 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AAGTGGTTAGAGCGTTATTTGGACTATGTGCATATTAGTTCAATTAAAGTTGTTCCTGATGACAAAGTAACGGGTTATGCAATATATAAGCGCAAACAGGTGAAAAGCAGTGCAGAACGCTTAGCACGTGCAGAAGCTCAAAAAGGGCGCTACGATTATGAAAATGCTTTAGCGCATTATCGAAAATTTGTGAAAAGTACCAATTTACCTTTTATTCAAATGTTGAGTGACAGTACAGCGCCTAATTTAGAATTAAAGGATAAAAATTACTTTAAATTGTTTATCGAAAAGCAAACGGCCCCAAAATCTGAAACTCAGGTTTTCAGCACTTATGGTCTAAGTTCAGTGTCGACTGTACCTGAATTTTAACCCAATATTTTTTCACTCTTTAACAGTTTAATAAAATCAATAAGTTATAAATGTGGGTTAAAACTTGGGTCTTTTATGGGTTTTAAGGTTTAACTCAAAGTTATAACTTTATTTTTTGCTATAAAACTACT # Right flank : AACCATTACAAATTAAGCATCCAGAAAAAAAGAAAGACAAAAGCTGCCATATGTAAAATTTGAATCGGAGCAAAAACTAAAGCAAAACGTGTTCCACCTGTAAGGAGAGCATTGACCGATTTTGCAATTGCGTGTGCGCCCAAACCAAGTCCAAATGCCCAAGCTAAAACTGAATTACTAGGCTCGCCTTGAATCACAATTGTTGAAAGCGCGCCATGAATTTCAAACAAAGATGCCAAAAGCGTTCCCGCAATTAGCCCAGCATCACCAAGAACAACATTCAGCCCATAGACACCCGCTTGAATCACCGTTAATGAAACAACAATAATCGCAGCCTCTTTTAAACTAAACATCCGACTGTCTGACTGTTGAACACTTTCTAAAGTTTGAGAACTACGCATGAACCATACCGAGAAAATGATCAAAATCAACATGGCAATAAGGCTTGGAAGAAGAATGACTTTAAACCACGACAAACTTATCCCAATGACAATAATCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9420-8312 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSR01000036.1 Acinetobacter wuhouensis strain WCHAW060023 36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9419 28 100.0 32 ............................ GTTGGATCGTAAGACCATTCATGACAAACAAA 9359 28 100.0 32 ............................ GTCCGACGGACGCGTGTCTGCATTGCGAAGCA 9299 28 100.0 32 ............................ ACGTGATGATCAATGTCCTGCGGGTCAATCAA 9239 28 100.0 32 ............................ ATAATAGAAATTCTGTGAAGTGGGGTAATTAT 9179 28 100.0 32 ............................ CAGTGCTTGCAATCTTCACTGCCAAATTTGTT 9119 28 100.0 32 ............................ ATTGGAATTTAGATATGTTTTAACATATGTCC 9059 28 100.0 32 ............................ AACCAATGACGCTAAATCACCTACAATCATAA 8999 28 100.0 32 ............................ ATTTAGACGGGGATAATCAACAACTTGTATTT 8939 28 100.0 33 ............................ ATTCACAGAAATTCGGTAATTGAAATTTGCTGT 8878 28 100.0 32 ............................ AGTTTGATTTCCTGTTTCAGGATCAGTTTTTG 8818 28 100.0 32 ............................ ATTGAAAAGAGATTTATACTGGTAATTAGAGT 8758 28 100.0 32 ............................ TTGCGGTGAATCTTATTTAGTAGATCATAAGT 8698 28 100.0 32 ............................ ATTTGAATTTTGCTTTGTTTCTGATGATTTTC 8638 28 100.0 32 ............................ TGAAGAGTATTTAAGACAGTGCCAAGCTGATG 8578 28 100.0 32 ............................ AGCAGAAAATGTCATTTTTTTTACTGTAAGAT 8518 28 100.0 32 ............................ GCCTGCAATGTTACCCATTATTTTTTCCTCAA 8458 28 96.4 32 ............C............... TCTTCATATTCTGAACGTGAAGATGCATTAGA 8398 28 100.0 32 ............................ AATATCAAAAGCATCTTGAGAAAAATGCTAAG 8338 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.6 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTTAGTGATTGGTGCTTTTGTGGAAGCACGTTCGTGTGAGCGTTTTTATGCTTTAGCACCGATTGTGGATGAAGAGTTAGGGCGTTATTATCGTTATTTGTTGAAGTCTGAATCTCGTCATTATGAAGATTATTTGACTTTGGCTTTGGATGTTGCCAAAACTGCGAAGTTGAAAGATCCTGAAGAGGATATTCAACAACGGATTGAATTGATTCGTGAAGTGGAAAAAGAATTAATTTTAAGTCCAGATAAGTTATTCCGCTTTCATAGTGGCGTACCGATGAAAGCTGTTGCTTGATGTTTTAAATGTTTAAAGAGAGGGAAGTGGTGACACTTCCTTTTTTTGTTTTGACAAAGCCAAGTTTTTACCCCAATATTTTAAGTACTCTTTAACAGCTTATATAAATCAATAACTTGCAAGTTAAATAAAAAACTTGGGTATTTTGCATATTTTTGCAATAACTCTATGTTTTTATTTTGTTTGTGGTTAGAATTTTACT # Right flank : TATTGATATAAAAAAAGCCCACTTCATAATGAGTAGGCTTTTTAGTATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGAATGCGATTATAAGGAGATTTAAAAAGGGGTCAAGCCTTAATTGTCATGTTGGCTTCATTTTTTAGTTATATGCTTTTAATTTGAACAAAAAAATGAAAACTTTCAGAAAAAATAATTGAAAAGCTTGCAACAGCTAAATTTGCTTGTTAGATTAAATTCATAAAGTGAGTTTAAGCAATGCTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGAATGAATACGCTTACGATTTCTCAAATTTTTGAAAACCTCTCTTTTTATCAAGACAATTATTTGTCTATTCTGAAAAATCCTGAACAATATTATCTGGAAGTTGAGCATGCTCATCTCGATGTTTGGCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //