Array 1 94898-98719 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMKY01000012.1 Alcanivorax dieselolei strain CGMCC 1.3690 sequence12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================= ================== 94898 28 100.0 32 ............................ ACCGAAGCCATTGGATGGATGAATGATCCAGA 94958 28 100.0 32 ............................ AGGTAGATGGACTGCATGCCCGGCTCTTTGTT 95018 28 100.0 32 ............................ ACACCGGCAGCGTGACTCGCGCCTACGCTGAG 95078 28 100.0 32 ............................ TACGAGGTTTCCACCCTGCACCTGGAATGGAG 95138 28 100.0 32 ............................ AAGGCGATCCGGGAAACGGATCTGGAAGAGTC 95198 28 100.0 32 ............................ CTGCCCGGTGATCTCAATCCGGTCGCCTGGAT 95258 28 100.0 32 ............................ GGTCGTCGCCCAGTGCCATCCAAAGCCCGCCA 95318 28 100.0 32 ............................ ATTCAGTGCGTCCAGATTCAGCGTGCATTCCT 95378 28 100.0 32 ............................ GTTGGCTACCTTTGGGAATGTACGCCGATCAA 95438 28 100.0 32 ............................ TTGCCCCCGGCGCCCAGTACAGGGCAGGGCAT 95498 28 100.0 32 ............................ GACAAGGTCGGCCGACAGGCGACGGGATGGAA 95558 28 100.0 32 ............................ TGGTTGGATTCGCCGACCCGTTGCACGGTGAA 95618 28 100.0 32 ............................ AGAGCAATTACAGTTCCACGCGCTCAGGCCTG 95678 28 100.0 32 ............................ AGTTGGTTATCAATCATGTGAAGCACCCGCCA 95738 28 75.0 45 ....................NCCGCGC. GGCAGCTAAGAAACAATCCGCCGGCCACACCTGCGCACCGGCAGT 95811 28 100.0 32 ............................ AAACATGCGTCGTGGCCTTCGGGCGTATCGTG 95871 28 100.0 32 ............................ ACTGAGGATGCTGGCGACCCGGTCGTGCTGAA 95931 28 100.0 32 ............................ ACCAGACGCATGCCACGGAACTCGCGGGCCCC 95991 28 100.0 32 ............................ AGCATCTGGACCCGCTGCCCCGTGCAGATGAT 96051 28 100.0 32 ............................ AGATTCGACGGTGAGAAAATCAGCAACGGCAA 96111 28 100.0 32 ............................ ATAACGTCGTCCAGCAGTCCGGCTTTGTGGAG 96171 28 100.0 32 ............................ AACGACAATGAGCCGCCGCCATCGGGCGACTA 96231 28 100.0 32 ............................ AAATCACATCGGACTCAGTCTGCGCAGCAGCA 96291 28 100.0 32 ............................ TCTAGGGGATCGTTCCTTGAATCTATCCTTGT 96351 28 100.0 32 ............................ AGAATTCTATCGCCAGGTACTGGCGTAGCCCT 96411 28 100.0 32 ............................ AAGGAAATGCGCGACCGCCTGCAGCATCACGC 96471 28 100.0 32 ............................ ATCCTGCCCCGTGGGCGGCACGTAGATGCCCA 96531 28 100.0 32 ............................ ATGGCCGAACGCTCGCCTGAGGTGCCATCCGA 96591 28 100.0 32 ............................ ACTGACGACGGATTCTGGAGCGTCATCGAGGG 96651 28 100.0 32 ............................ TGGAACACCTGGTCGAACTGGTTCTCGTCCAG 96711 28 100.0 32 ............................ GTACAGCAGGCGCGGTTTCGGGAGCGACTTCT 96771 28 100.0 32 ............................ CACCACCGATCCAGTAGGACCGACCAAGGCCC 96831 28 100.0 32 ............................ AGGAGCCGACGGACGATGTGCACCATGATCGT 96891 28 100.0 32 ............................ ACCTTGCGGCCCGCCAGCGCGGACCAGTCGGC 96951 28 100.0 32 ............................ CACAACGCACTTCACCGTCTCCGACCTATGCC 97011 28 100.0 32 ............................ TGGAAGGGGCCTACCTGGAAGGGGCCGACCTG 97071 28 100.0 32 ............................ AGGATATCCGTGCGCGGGTTGCGCGGCACATA 97131 28 100.0 32 ............................ TCATTGGGCTCTTGTTCTGCGCCGTGCAGGTC 97191 28 100.0 32 ............................ TGAACGATGCCAGCTCCAAATTCTGACCAGGA 97251 28 100.0 32 ............................ TGTTCCCGCGACAAAGAAGGGATCTCCTTCAA 97311 28 100.0 32 ............................ GTCGAGCCATGAACCGACGCTCGCACCCCATA 97371 28 100.0 32 ............................ AATGGCGGGCACGCATGGGGCTGAGCCAACGG 97431 28 100.0 32 ............................ GATACAGGAGAGTAAAGTCATCGCCTGTTCCC 97491 28 100.0 32 ............................ ACCCGCCCCGGCGGAACCGGGATTCCGAAAGG 97551 28 100.0 33 ............................ CCGCGACGGTGGCTTTCGTGCTGGTCGCCGGCT 97612 28 100.0 32 ............................ ACGGGTACAGGCCCTCTGGCGAAGGGACTTGG 97672 28 100.0 32 ............................ TTAAGGTAGACCGAAAGCAGGAAAAGCCCTCT 97732 28 100.0 32 ............................ CACTGGTGGAATGGGGTAAGCTGATCGGGGTC 97792 28 100.0 32 ............................ GCCTACTGGCCCGGCACCGTCCGGGCTTTTTT 97852 28 100.0 32 ............................ ACTACGTGTCCGGTGTATGGGACGGGCAGGGG 97912 28 100.0 32 ............................ TTCTTGATAAAGAGTTTCGGCGGCAACGATAA 97972 28 100.0 32 ............................ AGAGCAAGGCGGCATCTATGCCGGCCTCATGC 98032 28 100.0 32 ............................ TCGGGGAGAGTCGGCGTTCCCACCCCTATAAG 98092 28 100.0 32 ............................ TATCAGCCGATTGTGTTGCTGCGGCGGTCCAC 98152 28 100.0 32 ............................ AGCATGTGACGCTCCAGCGCCATCGCTTCAAT 98212 28 100.0 32 ............................ AGAAGCCGGACGCACGGCGCGAATTTTTACCT 98272 28 100.0 32 ............................ ATCGGCGCCAAGTCGGCGCAAAAGTCCCGTAT 98332 28 100.0 32 ............................ TCACAGCGCTGACACCAAAGGCCGCCAACAAG 98392 28 100.0 32 ............................ ACGCAGGATGACGGTGTCACCCTGGTGGATAT 98452 28 100.0 32 ............................ ACTCGCTTCGGCCAAGACGCCACCACCAAGTA 98512 28 100.0 32 ............................ AGGGGCCGAGACGATGTTGCAGGCCGTTTTCG 98572 28 100.0 32 ............................ ATGTCCGCGCGGCGCGACTTGACGTTCGGCGC 98632 28 100.0 32 ............................ CAGCGGTTGATGATCCCGCGCACCGTGTACAG 98692 28 89.3 0 .............T.......C..A... | ========== ====== ====== ====== ============================ ============================================= ================== 64 28 99.4 32 GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Left flank : CGGCTCTGGATCATTTAATGAGTCAAGATTGTCTGGCCGGCATGCGTGACCATATCCAAATGACAGGGTTGGCTCCGGTGCCAGGCAATGCCAAGCATCGTGTGGTCCGGCGCCGCCAATTCAAGACCAATGCGGAACGTCTCCGGCGTCGCCGGGCGCGGCGTCACGAGGAAACTCTGGAACAGGCTCGGGAGCGAATCCCAGACACGGTGGAGCGCAAGGTTGATTTACCCTACGTGACGCTGCGTAGCCAGAGCACGGGTCAGGACTTCTGCCTGTTTATAGAGCACGGTGACCTGCAGGCACATCCGGTTACGGGCCGCTTCAGCCGCTATGGCCTCAGCCCTACCGCAACGATACCGTGGTTCTGACCCTTTTTTTGATTCCAATTAATACTTTCCGAAAATCAATAACTTACGTCACGCTCCAAAATTTGGGGTGTGGCGCTTCTTTTTAGCCTTGTTCTTTAAAAATCAGGGAGTTAGATTCGTTTGGTTCTA # Right flank : ATACTGGATCGAGGGTCGCTTCTGGCATGCCCTTCGCCGCTGAGGCGACCTCCCTCAGCGGCTCGTGGTGCCTTAGCTAACGATACCGCGCCAGTTCCAGCCGTCCTATCTGGTTGCGGTGCACTTCGTCGGGGCCGTCGGCCAGGCGCAGCATGCGGGCGTTGGCGTAGGCTTTGGCGAGGCCGAAGTCGTTGGTGACGCCGCCGCCGCCGTGGGCCTGGATGGCCCAGTCAATGACACGGGCGGCCATGTTGGGGGCGGCCACTTTGATCATGGCGATTTCCTTGCGCGCCACTTTGTTGCCGACGGTGTCCATCATATGGGCGGCGTTGAGCACCAGCAGCCGGGTCTGATCGATGAGGATGCGGGATTCGGCGATGCGTTCCAGGGTCACGGTTTGTTCCGCCACCGGTTTGCCGAAGGCGACCCGCTCCTGGGTGCGTTTGCACATTTTCTCCAGCGCCCGTTCCGCCAGGCCGATCAGACGCATGCAGTGGTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //