Array 1 58177-59347 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOG01000002.1 Lactobacillus helveticus strain FAM22157 FAM22157_scf0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 58177 32 100.0 35 ................................ TAAAAGTAATACTGTATCGTTGCCAAATGTTAGTT 58244 32 100.0 34 ................................ TTTATGCTGTAACCACTGCGATTACCCCAGAATA 58310 32 100.0 34 ................................ GTTATCGAGTTTAGGCCAAAGAGGTGGCTGGCTT 58376 32 100.0 35 ................................ TTAAAAGCCTTAACGTAACGATTGGAATTAATGCT 58443 32 100.0 34 ................................ TTCTTAAACCAATTAATTGTATCAGAAACACCTT 58509 32 100.0 36 ................................ GTCAAGACCACCTTCTAAGAAGTGAAACCACTAGTT 58577 32 100.0 36 ................................ ACCTGGTCAAGAAGAATTATTAAAAGAAAATCGCGA 58645 32 100.0 35 ................................ AATTATGTTTGGGATGATAAAAAAGAAGCCCCGAT 58712 32 100.0 36 ................................ AGTGTAAGGAATGGTAGTCCAGCCATTATGATATTC 58780 32 100.0 34 ................................ ATAAGTGGGTAGATGGCTTAGTTAAGGGCTTTAA 58846 32 100.0 36 ................................ CAATGGCTCATATTGGGAGCAGGATAATCAGGGATT 58914 32 100.0 35 ................................ AACCTGATTCAAACGGAAATATTAAAACTGATCAC 58981 32 100.0 35 ................................ TTCTAATTTCTTTAGTGGTGATCCTGATGGTGGTA 59048 32 100.0 35 ................................ TTACGATTAGAGTAAAGCTCCAGAATCATAAGAAA 59115 32 100.0 34 ................................ TAAATATTGACTGAAAAAAACACTATAAATTTTG 59181 32 100.0 36 ................................ TACGCTCTTGTTCGTTGATTTTGATTGAGAACTACC 59249 32 100.0 35 ................................ TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 59316 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //