Array 1 9270-8245 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDSP01000003.1 Staphylococcus epidermidis strain DE0426 NODE_3_length_162059_cov_71.545279, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9269 36 100.0 30 .................................... CAGTTGGTCGTAAAGATACAGTTGTACTTA 9203 36 100.0 30 .................................... CCTACGACTATTACAAGTTTAGTAACGGGC 9137 36 100.0 30 .................................... CATCTTACCTTGCTATTATGACGGTAAACA 9071 36 100.0 30 .................................... TATCTTTTATGTTGGAACCAAATTCAACTG 9005 36 100.0 30 .................................... TTGTAAAAGCTAAAAATGAGGAAGAACTGT 8939 36 100.0 30 .................................... CAACCGAAATAGAACAAGCTATAAAAAATA 8873 36 100.0 30 .................................... GATAAGACGTTTACTCATAACAGAAACAGC 8807 36 100.0 30 .................................... TCTTGCCTCTTTGAACAGACCAGAATACAC 8741 36 100.0 30 .................................... TGTTTATTCAGTTTTGTGATTTATATAATA 8675 36 100.0 30 .................................... AAATCGCTCATGCGCATCACTACACAGAGG 8609 36 100.0 30 .................................... TTAAAGGACTTACAGATACATTTAGTATGA 8543 36 100.0 30 .................................... TTATCTTCATCATTTGGACAAGCCCACATG 8477 36 100.0 30 .................................... ATAAACCAGTCATACCTCTTGCCCAGTATA 8411 36 100.0 30 .................................... AAAAAAAGAAGATGAAAATGCATTTGATAA 8345 36 100.0 30 .................................... CTCGATTGAAGTTATAAAATAATTTAACTG 8279 35 94.4 0 ................-..................C | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.7 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Left flank : ATTATCAAGCAAAAGAAAAATCATTTGTAATCTATTTATATCCAGAAGCTGGTCTTAGCATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCCCGTTTTTTATCTGAAAGTATTAAGGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACGGATTAAAGAGAGGTTTGAGTATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATCTCTAACTACTTGCTTGCGGATATTATTGTTTTTAATGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATAATTCAAGGTTATAATTGTGCTAGAG # Right flank : CCTTTCTTGAATGTCATTTCTAAGTTGTTTGCAACAGTTTATGGTTATTTAGAGAGCATAGTAATGAAAAATGGGATTTAGTACCAAAAGCAGGACGCTCACCATATGATAAATATAATGACGAGGAAACTTTTTATGCGTGGAAACGACAGGCTATGATATTTCTGAAAGAATCATACAATGATTGGGATATGTTAACGATTGCACAATATCATGGGTTAGCGACGAGGCTATTAGATTGGAGTTTCAATCCATTAGTAGCAGCTTATTTCGCTGTGAAAGACTTTGAGGATTGTGATGCTGTTATTTATGCTTATTTGAAAAAATCAGATATTAATGTCAAGGAAGTACATCCAATTGAGAGTAAGGGAATAAAGAAAGTGAAACCAAATGGACTAGCAACAAGAGTAGTAAGACAAAGTGGTATTTTCACAATTCATGAACAACCAACTGCGTCTATTGAAGATAACTTATCGAAAAAAGAAAAATTAAATAAAATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //