Array 1 2061388-2063426 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028833.1 Trueperella pyogenes strain Arash114 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2061388 29 96.6 31 ............................G CTGCGCGTTGACGGGCGTGTCGCGATCCGGT 2061448 29 100.0 32 ............................. CCCGGTCCGTCAGGCTTAAGCACCAAAGCGTG 2061509 29 100.0 31 ............................. AAGCCTTCAAGTTAGTGAGCGTCTCGTGCTT 2061569 29 96.6 32 ............................G CAATCACGCCCCGGCGCGGGCGACAAGATTCC 2061630 29 96.6 32 ............................G CTCGAAACCGCTAGGGATCGCGCAGCCTCCAC 2061691 29 96.6 33 ............................G TCAGGCACCGCCGTCGATATAGCTGCCGGCGGG 2061753 29 100.0 32 ............................. GCCGCTACGTGCGGTCAACGATTGGCGCACGG 2061814 29 96.6 31 ............................G CCCGTCGACAGGTTCATGATTCCAGGCGTCT 2061874 29 96.6 32 ............................G CTAACACCTCGCGCGATGACAGTGCCTGATTA 2061935 29 96.6 32 ............................G CTCCCGCAAGGAGGGTTCCCAGGAGCGCATCG 2061996 29 100.0 32 ............................. CCCCACACCGTCGCGCAAGACCATGAAGGTCA 2062057 29 100.0 32 ............................. TGCTCCTAGCAAATGATGGACTAGGCCAGGAT 2062118 29 100.0 30 ............................. AGCCAGAACACAACAGAACGCCAGAAAAAC 2062177 29 100.0 32 ............................. GACAGCGCCGAGCTCAAACACACACACTCCGG 2062238 29 100.0 33 ............................. TGATGAAGGCGTTCCGCAGGGCCGTACGACAAC 2062300 29 96.6 32 ............................G CCGCACCGAAGTCGATAAAGCCCAGCGGCGAG 2062361 29 100.0 32 ............................. AGCTGCGCACCACGTGTAGCCGTATGGAGCAG 2062422 29 100.0 34 ............................. TCCTCACGGCGCAAAAACTGAACGACGCACTGCC 2062485 29 100.0 32 ............................. TGACGCCCTCGTTCACGGGGCAAATGGTGACA 2062546 29 96.6 32 ............................G GTACGCAAGAGCCCAAAAGACGCACAAGAGAG 2062607 29 96.6 30 ............................G GAATTTCGGCCCACCCATCGAAGATGTAAG 2062666 29 100.0 32 ............................. GTGCGCACACCAGCCCTCCCTCAATGGGCACG 2062727 29 96.6 32 ............................G CGTACGCCACGGTGGAGGGCGACGCCTGCTTC 2062788 29 96.6 32 ............................T CGTGTGCTTGATAAGAAGCAGTTATCTGAGGA 2062849 29 100.0 32 ............................. AGCTTCCGCGGTCGTGATCGTGTTAATAAAGC 2062910 29 100.0 32 ............................. GAGTTACAGGAGGAGCGGGAGAAAGCGAACGC 2062971 29 100.0 32 ............................. AGCTGCCGCGGACGTGAGCGCCATAATGATGC 2063032 29 100.0 32 ............................. GAGTGACAGGAGGAGCGGGCGAAAGCGAACCC 2063093 29 100.0 32 ............................. CTGGAAGACGCCGACCTGTGGGGTGCTGACCT 2063154 29 100.0 31 ............................. AACCACTGGTGCTGCGAGCCTGGCCAAGCCT 2063214 29 100.0 32 ............................. CTGGAAGACGCCGACCTGTGGGGTGCTGACCT 2063275 29 100.0 32 ............................. CGCCACTGCTGCCGCGAGCCTGGCCACGCCTC 2063336 29 96.6 32 ............................G TTTTGAGGTGGCCGGAGGCTTTGGCCTCCAGC 2063397 29 93.1 0 ..........................T.A | C [2063422] ========== ====== ====== ====== ============================= ================================== ================== 34 29 98.5 32 GTGGTCCCCGCGCAGGCGGGGATGAGCCC # Left flank : CCGCGGTACCTGCAGGTCTGCGGGGCGACCTCACGAAATGGCTTATGGAGATCGCACCAGGAGTGTTTGTGGGGACTCCAAGCGCGCGGATACGGGAGCAGATCTGGGCACGCACCGTCGCACTTTGTAAAGACGGCCGGGCAATCATGGTTTGCTCCGCGGATAACGAGCAGGGAATGACGTTTCGAACCCATCGACACGATTGGGAACCCGCAGACTTTGATGGTTTGACCTTAATGATTCGGCCAGGTGGTGGACAGAATTCTCAGAACAATCAGCGAAGAACGGGATGGTCGGACGCTAGGCATCTACGCAAAAAGTATTGATAACGATTGAACTGTTTGGGTGTCCAGATTTTTGATAGTTCGAGAATTGTAGATTACACGCGATGGTAGTGGATAGAGTGGATCCTGAGATATCCATTGGGCCATCCTCAGGTAGGGCGCAATAAGTTAAATGTATAATCGAAGTGCTGGCGGCAGAAATGCTGGTCAGCAAGT # Right flank : AGTGACGGTTGGAAAGTAGCCCAGTAGTTGCGTCGTTGATTTTGAGAATCACGCGCAAAATGCGAAACTGCACTTCTTCTAAAACCTGCAAACTCGTACACGGCATCGCGTCCTCCTCGGGTGCCCTCACAATCGCCAGGCGCCAAATCAAGTAGGCCATTGTCAGCTACTAGGAATCTGACAAACGAGAATCAACATCCATATGACGCTGGAGAATTCGTACGACTACCACGGCGTCGTCTTCGCACCGATAGAAGATAACGTGTTGACTGCCTGTCAGGCTGCGGCACGCTGATTCAAGTTCTTTGCGGAGGCGGTCGCGCACAGGAAAATCTGTCAAGCTCTCTAAGCTAGTCTGGAGTTCTCGCAGATACAGCTCCGCCTGGCGGGGTCCCCATTTTTCTTCCGTATGATCCCTGATATTTGACAGGTCAACCTTGGCTAGTGGTGAGAAAGCGAGTTTCACTGGTGCTGCTTTTCTATGATGAATTGGTCAAAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCAGGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //