Array 1 8750-11491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUD010000042.1 Limosilactobacillus reuteri strain O_Ruby_8_1 scaffold42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 8750 36 100.0 30 .................................... TGTACGAAACGAATAAAAGAAAGCCTAGCC 8816 36 100.0 30 .................................... TTAGTGGACGGCGCTTGGCCTATGGTTATT 8882 36 100.0 30 .................................... TATTCTCGTACTCAGGGGGGTCCAAATATA 8948 36 100.0 31 .................................... ATGGAAAGAATGCCCAACACAGTAAGCTTCA 9015 36 100.0 30 .................................... CAACCGCAAAAAGCCTGAAAAACAACGGCT 9081 36 100.0 30 .................................... CTACTAAGAGTTCTAAGACTATGCGTCACT 9147 36 100.0 30 .................................... CACTTTGTAAGTCAACCTTCGTCATATTGT 9213 36 100.0 30 .................................... AAGACTTTGGAAAGATTGGACGAAGCATAG 9279 36 100.0 30 .................................... ATGCAAGACTTTCTAAGTGAAGTTGAGCGA 9345 36 100.0 30 .................................... TACACTTAAATACTGATTTATTAATGACTT 9411 36 100.0 30 .................................... TAAAGCTGAGGGAAATACGGCAGAAGCTCA 9477 36 100.0 30 .................................... GAAAGCGAGGATGATTAAACATGGCTCAAT 9543 36 100.0 30 .................................... GAAGTAACAATGTTATTATAATAATGTAAG 9609 36 100.0 30 .................................... TAAACACGGGTTGCCCATCATTGCTGACGG 9675 36 100.0 30 .................................... AGCCATTGCCACCCAGCTCCTTTACGTTTT 9741 36 100.0 30 .................................... CTGTCATAAGAAGACTTGTCTGGGTCAAAG 9807 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 9873 36 100.0 31 .................................... TTTAACCTAACAGTTACCACACCAAGTGACG 9940 36 100.0 30 .................................... TGATAATATTATCATAATCAAATTCTTGCA 10006 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 10072 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 10138 36 100.0 30 .................................... TACGCTCATGGCTAACCCCTGCTTATATTC 10204 36 100.0 30 .................................... ACTAAAGTGTTTCCAAGCTTGGCTACAGGA 10270 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 10336 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 10402 36 100.0 30 .................................... ATGGTGTGCTGTTTCAATTTGGTAATAAGA 10468 36 100.0 30 .................................... AAACACACCAATGAATATCTGTTAGAGCGG 10534 36 100.0 30 .................................... TTATTTTGACTTTTTACTAGCTTGCAGTCG 10600 36 100.0 30 .................................... TAAAGAGTGGTAACGCTATGCAGTCTGCTA 10666 36 100.0 28 .................................... AACGCGCGCAAAACCGTAGTAACGCAGA 10730 36 100.0 30 .................................... TGCTACTATGAAGAAAATTCGGAACTTGGC 10796 36 100.0 30 .................................... TGCTGTTAATCCCGTGGATGGGGATGCTAG 10862 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 10928 36 100.0 30 .................................... TCTACCGGCGGATGACGATTGTTGAGCCTT 10994 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 11060 36 100.0 30 .................................... GATCAAATTAACAATGCAGTACGTTCTATT 11126 36 100.0 30 .................................... TCTCGATGACAGTGGTTAATTCCCTCGTTA 11192 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 11258 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 11324 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 11390 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 11456 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 42 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //