Array 1 1692-66 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL872450.1 Streptococcus sanguinis SK160 strain CCUG 59321 SCAFFOLD4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 1691 29 93.1 43 .......G......G.............. TCACGGACAGCGTCCCTAGGGTATTTCACCGATGTGTAAGAAA 1619 29 89.7 43 .......CT......G............. TGGCAAGCTCTCTTTACTAAACAAGTAATCTTGAGGTAAGAGC 1547 29 82.8 43 T....T.C......GG............. GTTGGGTTTTCAGGAAGAATGAATGTTACTTTTTCAGTAAGCC 1475 29 82.8 43 .....T.C.......G.......AA.... TGTCATTTGGTGACCTCCTTGCTTGTGCTTGGCTTGGTAATAC 1403 29 79.3 44 ...T.A.C......CG....T........ TCTTTCCTGTAATTGATAAGAGCAACCCAATGGATGGTAATAAC 1330 29 89.7 45 ........T.....C.....T........ GGACTCGCACTGGTTCCGATGGCTGGAGTCGGACTAAGTTAGAAA 1256 29 96.6 46 .......C..................... TCAATAAAATCATTCATCAATGCTTTCTTGACTACCGGGTAGGAAC 1181 29 100.0 47 ............................. CATTATAACGGCTGGCATGGTGATTGAGATGAGTAATCAGTAGGAAC 1105 29 100.0 42 ............................. TCAGACCAGATTCAATTCCAGGTCGCCCATCTTGGTAAGACC 1034 29 86.2 42 .....T.C.......G............T TAACCATGACTATCCTGTAAAATTCTGGCCGATAGGTAAGAC 963 29 86.2 43 .....T.CT......G............. ACAACGTGGTAGTTCCAACCTAAAACGGTTTTTTCGTAAGACC 891 29 89.7 43 .......C......GG............. ACAGAGCGAGAATCAGCTTGAAAGTTTTCTAGTGTGTAAGAAA 819 29 86.2 44 .......C....T..T....T........ CATACCGCACAACAAGTTCTCTTAATCCAGTTTTCAGTAAGAAC 746 29 82.8 43 .....T.C.......G..T..G....... GCCGTAGTTCGACTGATAAGTTGTACATTATTCAGTTAAGAAC 674 28 75.9 44 .....T.CG.....CG....T...-.... CCCCATTCTGGCATTTTGAGTGAAAATCATATCATTGTAAGAAC 602 29 86.2 42 ..T....C......GG............. GAGATAGTAGGTAGTAGATTGCTCATTGGTATACGTTAGAAA 531 29 89.7 42 .......C...C...G............. TCTTATTTTCGTCTTATAAGAGGCCTTTCATTTAGTAAGACA 460 29 86.2 44 .......G......GG....T........ ATAAAATAATAATTGTAAAATTAAAATGTTTTACAAGTAAGACA 387 29 89.7 45 .......C......CG............. ACAAAAAGGGGGAATGATAAGCAGAATAAAAAATACTGTAAGAAG 313 29 82.8 42 ....G..C.....A.G....T........ GTTTGCTTGTTAGTCTCTACGTTAAGCAGGTTTCGTAAGAAC 242 29 82.8 45 .....T.C......CT....T........ CCAATCAAGCCATTATTGGTAGTATTTGTTCCATCTGGTAACAAT 168 29 79.3 45 .....T.C......GG....T...A.... GGAAATTTTGTCCTTCCTTTAGGTCTTCCTGGCTTTCGTAAGACC 94 29 82.8 0 T....T.C.......G.....G....... | ========== ====== ====== ====== ============================= =============================================== ================== 23 29 87.0 44 CCCCAGTTACCTCGAAAGGGGACGGAAAC # Left flank : TTGAGAGGGGACGGAAACGCGTATTCAATCAACATTGCCTTAAATTCTGCTTCTGTAAGC # Right flank : CAAAATGAACGCTCCGATTCCTTTCAGAATAGCTGGTAACAATCTCCATTCACCTCGAGAGGGGAC # Questionable array : NO Score: 4.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCAGTTACCTCGAAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [35-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //