Array 1 684771-686193 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLE01000001.1 Zavarzinia aquatilis strain HR-AS HR-AS_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 684771 36 100.0 30 .................................... TGCAGGGTTCTCATATACGCGCACGCGCGA 684837 36 100.0 30 .................................... ACAGATCGCCCGCTATATCGACGACCCCAA 684903 36 100.0 30 .................................... CTCGGCCATAGTCACTTCTTCTCCAGGGGT 684969 36 100.0 30 .................................... AGTATATGCCCGGCACTGCGTCGCCGTGCA 685035 36 100.0 30 .................................... CCGGTCACCTACGTCGTCAATACCGACTAC 685101 36 100.0 30 .................................... GCGCGACGTGAGCGAGATGATCTCGGGAGA 685167 36 100.0 31 .................................... AACCCAGCCCGGCATGTTCTCGTAGCGGGTA 685234 36 100.0 30 .................................... CAAGCAGGAGATCAGGAGGCCATCCGAACT 685300 36 100.0 30 .................................... CCAATGGGTGGGCAGATGGATTTTGATGGG 685366 36 100.0 30 .................................... AAGATCATCGAGCGGTCCTGGTGGGCCGGA 685432 36 100.0 30 .................................... GGATTTCCTGGCCGATCTTGGCCAGGGCCG 685498 36 100.0 30 .................................... AACGGAACGGATTGGGCGCCAAAATCGGCA 685564 36 100.0 30 .................................... CGGTAAACCCTTTTTATAGTTAACAAACTA 685630 36 100.0 30 .................................... ATCGCCGCATCGCGCTGCGCGTTCAGTTGG 685696 36 100.0 30 .................................... CTGATAGCCATTCGGGCGCGACATCAGCAC 685762 36 100.0 30 .................................... TCACAGGGCGACGGCTGGGCGCGTCGAGAT 685828 36 100.0 30 .................................... TGCAGGGCCGTCGGCGGGGAGGAGAGGGAC 685894 36 100.0 30 .................................... TTCATCTTGCTCAACTTCCGATTCCCGGCC 685960 36 100.0 30 .................................... GGACCTGGCCGAGGGTCGCAGCGTCGGTAT 686026 36 100.0 30 .................................... GACGCTCATTCGGCAATAAGCCCGGAGTTT 686092 36 100.0 30 .................................... CTGGTACACCATCGACATCTCGAAGGTCGA 686158 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 100.0 30 AGTTTAGCGGTCTGGTGACTGGGGGCCAACCGCAAC # Left flank : CGACCGCCTCGCCCTGCCCCTGCCCCGCCTGCCGCTGGAGGGATGGGGTGAATGACGCCCGCCCACCCCCGCCAGCTCCCCCCGCGCCGGCCCCGGGCGCGCTCAGCGGCTATCGCATCATGTGGCTGATCGTGCTCTTCGACCTGCCCGTGCTGACCAAGCCGGAGCGGAAAGCGGCGACATCGTTTCGCCACGCCCTGCTCGATCTTGGTTTCGAGATGAGCCAATATTCGGTCTATCTGCGCTTCGCTGCCGGCAAGGAACAGGCCGATGCCCTGTGCCGCCAGATCGAAGCCGCGATGCCGCGCAGCGGCAAAGTCCACGTCGTGCAGATCACCGACCGGCAATACGAGATGATCCGCACCTATCGAGGAAGGAAACGTGAACCCGGTCCGAAAAATCCCGGTCAGCTCACCCTGTTCTGACCCCGAGTCGCGCCGTGCGCCAACCCGGCCAGACACGAAAAAAGGCCTTGTTTCCAAGGCCTTGATCCGTAGTCC # Right flank : CGAGCTGTTGAAGCGAGCGATCCTCTTCGTCACGCACGAGGATATGGCTGCCGAGCAGGGGTAAGGAAGGTGCACCGCCTGCTCACGCTCGCCAATTTCGAGGGCAAGCTCTACCGGGGCTTGATGATGGTGAAGGAAACGACAAGCGGCCGGTTCCTGTACGAGCAGGCGCTGACGGAATGGCAGGAAGTCGGAGCCAGCGGCATTGGGTACAGGGCGGCTTCGACCCCCGCGGAGGTCTCGTCCCTGATCACACCGGCTCCGGAGGTCAATCTGCGTTCGCTGGCATCCGATGTAAAGATCAATTTTTCGCGCGGCACCCCCCCCAGCCTGTAGTTCAGCGATCCGACGAATGGGGGCCAACCGCAGGCGAACTGCCCCCTCGCCCTTGCCTCAGAACAATCGGCCGCCGTTGGGGACGTCGCGTTCGGGGGTGACGAGGACGACGGCGCCGGTCTCGTCGGGCAGGCCGAGGACGAGGACTTCCGAGATGAAGGGGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCGGTCTGGTGACTGGGGGCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 258012-255782 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLE01000004.1 Zavarzinia aquatilis strain HR-AS HR-AS_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 258011 31 100.0 35 ............................... ACGAGTTCGGCGAAATCCGGCTCGACGTCCTGCGT 257945 31 100.0 33 ............................... CTCAAAGCCGAAGAGGATCGCCGCCGCGCTATC 257881 31 100.0 34 ............................... TGGATTGCCCGGGGCACCGTCTGCGGTCGGCGGA 257816 31 100.0 33 ............................... GTGCCGAAGGTCTCGGGCAAATGGTCGTGGGAT 257752 31 100.0 36 ............................... TTGAGCCAGTCGACCTGCCCAGCCACGCCATAGTAG 257685 31 100.0 36 ............................... GGGGGAACCAGCAATGGCCTGCCCCGACAAGCAGGT 257618 31 100.0 35 ............................... CCTGCGGCGGAGCCGCTTACTTGAATAACACTGCA 257552 31 100.0 35 ............................... GGGGCGGGTACGCGCCCGGGCTCGAAGCTGATCGT 257486 31 100.0 36 ............................... GGCGGCATGACGGCGGACAATTGGGCCGCGATCAGG 257419 31 100.0 34 ............................... TCGTAACTGTCGACAGCCCCGGACCGCATCGCTT 257354 31 100.0 36 ............................... AAGGCAGGCGCCGGAGAGACTGCAGAGGCTGCGCCA 257287 31 100.0 36 ............................... TCACCATGACCGAGCGCGGCGAGGTCCTGCGCATCG 257220 31 100.0 36 ............................... CACCTGGCGGCCGGCGAAGACATGACCATCGACCAT 257153 31 100.0 37 ............................... AACCGCGATGGACACGGCCCAGCTCACGGCCGTCCCC 257085 31 100.0 36 ............................... CTCGTCCAGACTCGGGCTGGCATCTATATGAGGTAC 257018 31 100.0 36 ............................... AATGGGGGAACCGCCTTCGCTGGCGGCGGCGATGGC 256951 31 100.0 35 ............................... ATCCTTGGTGTGCTCGAGGGGATGCAGTCCGTCGC 256885 31 100.0 38 ............................... ACCCATGAAAAAAGGCGCCCGGTCAGGGGCGCCTGGTA 256816 31 100.0 37 ............................... AACAATTCGGCCTTGGCGGTCACCCTGACCGCCATTA 256748 31 100.0 38 ............................... CTTGAGGAAGCCCTTGAGCTCGTCCAGGCCCTCGGCTG 256679 31 100.0 36 ............................... AACCACGCGGCCTTGGCGGTCACCCTGACCGCCATT 256612 31 100.0 35 ............................... TGCCATGTTCTCGTCGTTGCGCGCCTTCGCGGCGA 256546 31 100.0 40 ............................... GGGCGACATTGACGAGTCTCGGCACCGCAACCGGAAACCT 256475 31 100.0 35 ............................... AGCCAGCAGTGCTTGGCGATATCGTTGTCGAGGCT 256409 31 100.0 37 ............................... AGACCCTGACGGATCGCGCGCGTCATGCGGGTCTTGC 256341 31 100.0 34 ............................... TCCCCCAGATCGGGGGCAAGTGGACGTGGGATGT 256276 31 100.0 33 ............................... GGCACCCTTGCGGAAGAAGGTGGCGAAGGCACT 256212 31 100.0 34 ............................... CGGTCGAGGCGCGGGCGACGCGCGAGGATATCGG 256147 31 100.0 37 ............................... GGTTTCGAGCGCCAGCCCCGCCCAATCGGCAAAGGCC 256079 31 100.0 35 ............................... GTGGCCGGCGCGCCCGGCCCTCTCGAAGTCCAGAT 256013 31 100.0 37 ............................... CTCAGCCGGGACGGCCAGCAGATCGGCGAGTATCGGG 255945 31 100.0 36 ............................... GGGACGATTACGCTAGATCCGCATCATCATTACATC 255878 31 100.0 35 ............................... ACTGTCAGGGTGCGGAGATTGCCCTTGGACGAGCC 255812 31 71.0 0 .....T..TG.G..A.C..C..T......C. | ========== ====== ====== ====== =============================== ======================================== ================== 34 31 99.1 36 GTCGCCCCCTCACGGGGGCGTGAGTTGGAAC # Left flank : TCGACGCCTACCCGCCCTTCGCCGCGCGCTGAAGCGACGAGATGCTCGTTCTCGTCACCTATGACGTCGCCACCGCAGACGCCGCCGGCCGCCGCCGCTTGCGCCATGTCGCCAAAGCCTGTCAGGATCACGGTGTGAGGGTGCAGTTCTCGGTCTTCGAATGCGAGGTCGACCCGGCGCAATGGGCGATGCTGCGCGGCCGCCTGCTCGGCCTCATGGATCCGGAAAGGGACTCCCTGCGCTTCTATCTCCTGGGCAGCGGCGCCCGCCACATCGAGCATCACGGCGCAAGGCGCCCGCTCGATCCCGACGGAACCCTCATCCTCTGACGGCGCGCGAACCCCAAGCGGTCGCGAAATCCCCGGGATATCCGCGCACGCCCGATTCCGCCAGCCTCAGCCCCGAACGCCCCGAAAACCAGCCCCGCGAGTACACCACGGCCAGACATTCGCGCAGCGGCAGCCATTTTTTCCATGCCTCCAAGCGGTTATGATGTCGGG # Right flank : GTTGGCGGCGCGGGCACCGGTCCGGATAGCGGGGCCGCGGACCCTTGCCCCCGGAGCGTCGGCGGGCGAGGATCGGCAAAACCGATCGGGAACCCTGTCATGAGTCTTCTTCCCATCGCCGACCGCTGGTTCGAGCGCAAGCGCATCTCCGACGACATCACCCTGCTGTGGGAGCCCCATGTCGTCCCGCTCATGCGCTGCAATATCTGGCATGTGCGCGGACGCGACCGCGATCTTTTCGTCGATACCGGCATGGGCGTCGCGTCGCTGCGCGAGGCCGCGCGCGACCTTCTCGACAAGACGGTGAGCGCCGTCGCCACCCATACCCACATCGACCATGTGGGCGGCCACCACGAATTCGACAGCACCATCGTTCACGAACTGGAGGCCGAGAACCTCCGCCATCCGGCAGACCGGGGCGGATTGCTGGAATCCGTGCTCGGCCCCGATTTCGCCCGGACCTTCACCGAGATGGGCTATCCCTTCTCCGGCGACCTGAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGTGAGTTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //