Array 1 17188-19672 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXPW010000002.1 Ureibacillus thermosphaericus strain DSM 10633 DSM10633_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 17188 35 86.1 30 .A.......-.GT.........A............. GGTTGTACCTTCTTTTGTTTTGGAAGCAAT T,TC,TG [17193,17206,17209] 17258 36 100.0 30 .................................... ATACCTTCTCCTTTTAGAATTCTGGCTTGG 17324 36 100.0 30 .................................... CCATTTCCCATTCACCCATTGACCTTCCGT 17390 36 100.0 30 .................................... ATGACTTCTGTTAGATCAAGAGGCGGCAAA 17456 36 100.0 30 .................................... CTTTTGTTTAAAGTGGCAGTCGGAGTTCGA 17522 36 100.0 30 .................................... TCGTACCTCGCTCCAATATCGGCTAAGCCT 17588 36 100.0 30 .................................... ACCGACATCTTAAAAAAAGCTAGCAAATGT 17654 36 100.0 30 .................................... CGACAATGCTAGTTTAATATCTTCAGCATG 17720 36 100.0 30 .................................... TTCGATTAAAAATTGAATGTTGCGATACAT 17786 36 100.0 30 .................................... GTCGTTTGAAGCCTTGCTACGTCTTCATTC 17852 36 100.0 30 .................................... ATGGTGAGTCGACACCGAATAATGCAGCTT 17918 36 100.0 30 .................................... TATATAAATCAGCTGAAATATATGCGCGAT 17984 36 100.0 31 .................................... ATATATAGCATAATGCGCTCCTACATAGATT 18051 36 100.0 30 .................................... ATACATGTATTTGTATTGTGGGCTTTGCCA 18117 36 100.0 30 .................................... CAAGTACCAAGCGGTAGAGAAAATCGTAAA 18183 36 100.0 30 .................................... TCATTATCGCAAATGTAGACAGAATGGTGG 18249 36 100.0 30 .................................... AACTGGTTTTTGGTGCTTATAGCGCATGTC 18315 36 100.0 31 .................................... CTATCATTTCCCTATATTGCAATAAAACACA 18382 36 100.0 30 .................................... AAGTTCTATGATTTCCATAGCGAATGAATT 18448 36 100.0 30 .................................... TTAAATCGCCGTTCTGATAGTCGTTCTATT 18514 36 100.0 30 .................................... CCATCCGACTCCATCGCATTTACGATAGGT 18580 36 100.0 30 .................................... CGTCTTTAAAATGATTATTAACTTGCGTCA 18646 36 100.0 30 .................................... CGAAGTGAGTGTTTTTTATTCTGATAAATC 18712 36 100.0 30 .................................... AAGGTGAATCGTCATATTTGAAACTAGATC 18778 36 100.0 30 .................................... TACGCCTTTTGTGAATTTTTCATCAAAATG 18844 36 100.0 30 .................................... ATTTTCCCCGCACAATATCTCCTGCATAAA 18910 36 100.0 31 .................................... TGCGTTGCTTTCGTGGTTGTAATCATAGTTG 18977 36 100.0 30 .................................... AACCTTCATCTAAATCATTGCCGCAAGTTA 19043 36 100.0 30 .................................... TGAGACCCTTGTGTTGAATGTGCTGTCAAA 19109 36 100.0 30 .................................... AGACATCACCTACTACCTACTCTTAATGAT 19175 36 100.0 30 .................................... TCCGCAATGGAGTGGATTTTTTAGGCTTTC 19241 36 97.2 30 ......T............................. TCAATTATAGAATTATCAACATCATAATTT 19307 36 100.0 30 .................................... CTTTAACAAGGTTGTATTTGCCCCAATTTT 19373 36 100.0 30 .................................... CTGATACACCCGAACGGTACGAATATCATC 19439 36 100.0 30 .................................... TATAGCGATAGTTATATATGCAAGAGTTGT 19505 36 100.0 30 .................................... TGTTATTTTTAGAAGGCATTTTTATATGTT 19571 36 100.0 30 .................................... CAATCGTAACATTGCCTTTTGTTTCTATCT 19637 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 99.6 30 ATTCAACTATACCGAAAAACTGGAGAGTACCGAAAC # Left flank : TATCTGAACAAGCGGACGTGTTATCCGAACAAGTTGCCGCGCTATCCGAACAAGCGGACGTGTTATCCGAACAAGTTGCCGCGCTATCTGAACAAGCGGACACCCTATTCGCACAAGTTGACACGCTATCTGAACAAGCGGACGTGTTATCCGAACAAGTTGCCGCGCTATCTGAACAAGCGGACGTGTTATCCGAACAAGTTGCCGCGCTATTCGAACAAGCGGACACCCTATTCGCACAAGTTGCCACGCTATCTGAACAAGCGGACGTGTTATCCGAACAAGTTGCCGCGCTATTCGAACAAGCGGACACCCTATTCGCACAAGTTGCCACGCTATCTGAACAAGCGGACACCCTATTCGCACAAGTTGCCACGCTATCTGAACAAGTGGACGTGTTATCCGAACAAGTTGCCGCGCTATCTGAACAAGCGGACACCCTATTCGCACAAGTTGCCACGCTATCTGAACAAGAGGACACCCTATTCCTAAAGGCAGAC # Right flank : CCTCAATTTTATTATAGCAGAAGCATAAAAAAAACGTTCAGTACTCTGCAAAAAATTTTTTAAGATTAGGCGGAAACTTAGTGAAATCAACATCCCATTCAATCTCCAATAATTTTAAAATTACATACAGTACTACAATGTGTGTTCTGTGGATATTATTCAAATCTAATAAAAACTCCCCCTTTATGCCCACCTTATCCACAGAACTTAACAATAACTCTTTCGTTTTCAAAAAATCCTCATTTTCGATTGGAATAGGAATAGTATTAAATACTTTTGATCTTAGCATTTCCACCCTTGCTTCATTAATCACTTGACCTTTTAAAATAAAATTGCTTCTTCCTTCCACATCATCAAGAGTTGTGATGATAATCGCATAACAACCTCTATTCATTAATTGTTTTAGTATCAATAATAATTCCTCAATTTCTTGTTCATCCGCATACAATTCAGGTAGCTCAATAATAATTAGAAGTCGCTTTGTAATTTCCTTTTCTAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAACTATACCGAAAAACTGGAGAGTACCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7470-5512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXPW010000041.1 Ureibacillus thermosphaericus strain DSM 10633 DSM10633_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 7469 32 100.0 34 ................................ ACTATTCAATTTTCGAGTATGATGGAGAATATTA 7403 32 100.0 34 ................................ CCCTTTCCTTGTTTTTTTCGAACCCAACCTTTAG 7337 32 100.0 33 ................................ AGCTTGTTTAATTAACCAATCAATAATCTCGAA 7272 32 100.0 35 ................................ TTTTATTGGTAGTGATACCAAGATATCTAATGAAA 7205 32 100.0 36 ................................ ATGTTTCGGTTGGTTTAAATATGAATAATATGATGG 7137 32 100.0 35 ................................ CTTTTACATTTAACAATCTTTCAAGTGGTCTGTCA 7070 32 100.0 34 ................................ AATTGAAATTAGACAATGTTCCACACAAAGATCA 7004 32 100.0 34 ................................ CCTCGTTAAGAATTTTTAAAATGCATATCCATGA 6938 32 100.0 35 ................................ CTTCCAAAGATGGTCTTCATACGTACGTTTTTGAA 6871 32 100.0 34 ................................ AATTGACCAATCTCCAGATACATCTCGATACCAC 6805 32 100.0 33 ................................ ACTACCTTCCAGCCGTGTTGGAAGTTCATTTAT 6740 32 96.9 33 .....................A.......... TGCTCTGCTAACAGCACGTTCCGCTTGGATGTA 6675 32 100.0 35 ................................ GTACTGTGTATTAAGCTTTGTTATCCTTTACAAAC 6608 32 100.0 34 ................................ AAAAATCGGGGTGTAATCATCATTTGTACTAAAT 6542 32 100.0 35 ................................ TTGGGAAGTTGGGAATATTATCCAGAGCACTCAAA 6475 32 100.0 35 ................................ AATGTCCCAATAAATTCTAAGAGTGACCTCATATT 6408 32 100.0 35 ................................ GGGAGAAAAAAGAAGATGTATTGTATACTCCGCAA 6341 32 100.0 35 ................................ TTGAATTGTAATATCATTGGAAATTGAGTACGTAT 6274 32 100.0 36 ................................ TACAAATTGGTCAATTCCATACCAATTCCGAAGTCT 6206 32 100.0 34 ................................ TTCTAAAGCTTCTTTGTTTTTTTCAATAAAGTCT 6140 32 100.0 35 ................................ AACGTAGGTTCGTTTGTAAATCCGTAGAAGAATCG 6073 32 100.0 34 ................................ ATCGAAAAACTCATTCAGTTTTTCTTGATATACT 6007 32 100.0 33 ................................ AATAGGCATCGACCAAGCTTTTTTCTTTCCAGT 5942 32 100.0 34 ................................ ACTTCAACCACAGCTACAGCATGACCTAATTTTT 5876 32 100.0 35 ................................ AGAAAGGGGCTTTACATTTGAGTACTGAAACAGAT 5809 32 100.0 35 ................................ AATAAACCTTGTTTGATTTCGTCGTTTACAGCAGG 5742 32 100.0 34 ................................ ACGTACAAAAATACTTTCGATTCCATTGGAAGCA 5676 32 100.0 35 ................................ CAGTCGAACAGGTTCCGACTCATCGTCACAATTAA 5609 32 90.6 34 ................GC.....A........ AGCCTATTAAATAATTGTGATATTTTCCCGATAG 5543 32 87.5 0 ...A..C.........G..........T.... | ========== ====== ====== ====== ================================ ==================================== ================== 30 32 99.2 34 GTTGCATCCCGTATAAATAAGGGGATTGAAAC # Left flank : ACCTTAACATGTGCAGATTATACCCAGCACGTGCGGGAAATACTTGCGCATGTGTGGGAAATGACATAACTTGTGTAGATAATTTTCTGCTCGTGCGGGAAATGCACGAGCATGTGCGGGAATTGATTTAACATGTGCAGATAATATTCTGCTCGTGCGGGAAATACACGAGCATGTGTGGGAAATGATATAACTTGTGCAGATAATATTCTGCTCGTGCGGGAAATACCTTAACATGTGCAGATTATACCCCAACACGTGCGGGAAATACATGATCATGTGTGGGAAATGTCTTAGCATGAAAAGATAATATAATAAATAAAAATTAATTAGTGCTAATGTAAAGCGCACATGAAATTGCAGGGGGATTAGCACCAATTGATATTCCTAATTTTTTAGATATTTTGTATAATAAATTCTAGAAAAAGTCATTGCAATTTTGCACATTAGCACTTTTATACTTTTGAACCCTTGAGAGATAAGGGCTATAAAAGGTTACC # Right flank : ATCACTTAATGTTCTATATTAATGTGGAGGATAAGGTTGCACCCCGTAACTGAGGGGATTCAAAAAGTAAAAACTCTTACATGTAAATGAAACACACCTCCTTTGTCGTTTTACAAGGAGGTGTGATTTATCAGTCATTGAGGAGAATAATATGATCCAATATCAAGACAATCATCTCATCGTATTTGAAAGTCAACTTTATAAAACAACATCTACCGTGATTCAGACAGAAGATTGTATGATTGTCGTCGATCCATGTCTGCTGCCTTATGAAGTGGATGAAATTCGTGAGCATGTGGTGAGTATAAAAGGAAATCGACCTGTTTATTTAATTATCACTCATTCCGATTGGGATCACATCGTGGGAGCTGGGGCATTTCCGGAAGCGATTGTTATTGCCAGCGAAGCCTTTCAGTTGAAAAATCCAAATGAAATTCTGGAACAAGTAAAGGCATTTGATGATGAATATTATATCGATCGAAAAACACCGTTAGTTTATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCCCGTATAAATAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //