Array 1 265636-266987 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBS01000001.1 Staphylococcus lugdunensis VCU150 contig00012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 265636 36 100.0 30 .................................... CTTTTTTTATGATATAATGTTTTTTGATTA 265702 36 100.0 30 .................................... CTTCGCCCTCAGGTTGTTGTGTGTCATCTT 265768 36 100.0 30 .................................... TCGACCTTTTGTCAAATAGACATCGTGTAC 265834 36 100.0 30 .................................... AACAAGGCCTTAGAGGCGCAGAATTGATTT 265900 36 100.0 30 .................................... GATAATCTAGCTTGTACTGTTGAGCCGTGT 265966 36 100.0 30 .................................... TTAGTACACATATTAGGTCATTAATTGCAC 266032 36 100.0 30 .................................... GATAAAGAATGTTTTTTACACATATGGTAG 266098 36 100.0 30 .................................... ATTTGGATTTGTTTCAAAGAATTTAGGCAT 266164 36 100.0 29 .................................... TAAGTTCGTTGGCATTGTTCGTGGAGTTG 266229 36 100.0 30 .................................... TTATAGAATACCTGAACGACCAATTCAAAC 266295 36 100.0 30 .................................... AAGTGAGTTTAATAAGCGCAAGTGACGAAA 266361 36 100.0 30 .................................... TTAGTCGTATTGATAGCCAAGCTGTATTCC 266427 36 100.0 30 .................................... GAATACCACCACCTAAAATTCTATCATATT 266493 36 100.0 30 .................................... CTAGCAAAAAGCGTAATCCTCAAAAAGGAA 266559 36 100.0 30 .................................... GTGGGGTTGTTGAAAAAACTTTCGGATCAG 266625 36 100.0 30 .................................... AAATAAGTTTTAAATAATGATTTTTCTGTA 266691 36 100.0 29 .................................... ACAGTGCATTTTATGCTTTAAGCCGCTTT 266756 36 100.0 29 .................................... CTATCAAGAGGGTGTAGTTGCAGGATTAA 266821 36 100.0 29 .................................... AAAATTGAGAAGAATAAAAAATATGTTTT 266886 36 100.0 30 .................................... AATCAATTTAATGATACTGAAATTGAATAT 266952 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATAC # Left flank : CTGGATTTGTCGAAGCAGTCAGTCGTACGGGAAGTATTATTGGGACATTTATTTTCCCTATTATTCTAGCTGCAGTAGGCCTTACCAACACCATGTTAATCTTAAGTATCGTACCATTAGTTGGATTAATTATTACAAGCGCAATCAAATGGGAACCTGTAGGGAAAAATGTTGAAGTAGAATAGAAAAGATATACCATGCGTACCTGTGTAGCAGCCTTATTACTGTTACATAGGTATTTTATGCTTACTTTTTGTTTGTCACAAATAACCTGTGTCATCACAATACTACTATTAAATCTATTTGTATTTATAGGATATTAGATTTTGCAAATAGAAAAAGAATAGTAGTGTTTATTAAAAGGGAGTAGCATTTTTGTTTGTCAAAGTATATATTATAGATAGTTAATATGAGTTTTGGTATTTATAAAAATAAGCATATTAACAAAGAAGCTATACAGTAGAGTTTAAAATCTATAAAGTTCATTTTTAGAGCTAGAG # Right flank : CTATGTAAAATCGTGTTGCTTATTATACATCTTATCTATAGGACATTGAGAGATTATTGAAAATTAATTTTCGAAATATTATAAAATTATATTGATTTTTTAATTCCTATAAATTATAATTGAATTGTAGATACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTGAAACAAGACAATATGTCGTGTTTATCCCATCAATTTATTGGTGGGATTTTTTTATGTTTTTAGCAAAAAGTAATACCATACTTTATATTTTTAAATTATAATAAAGATATAAATAAAGGTGGGTGTATATAATGAATCAAAAATTTATTTTAGGTTTAGATATTGGTATTACATCTGTTGGATATGGTCTCATAGATTATGAAACTAAAAATATTATAGACGCAGGTGTACGTTTGTTTCCTGAGGCTAATGTAGAAAATAACGAGGGCCGTCGAAGTAAAAGAGGTTCTCGAAGACTTAAGAGAAGAAGGATACATAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //