Array 1 2137951-2136891 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP040006.1 Schaalia odontolytica strain XH001 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
   2137950	    36	  94.4	    28	..................G................T	GACTCGCCGCCGATCTGGTGCTGGTGAC	
   2137886	    36	 100.0	    28	....................................	CGATGAAGCGGGACGCGGCGAAGCGGTT	
   2137822	    36	 100.0	    28	....................................	CAGGGAAACCATGCGCGTCACGCGCTCA	
   2137758	    36	 100.0	    28	....................................	CCGTCGCGCACACGCCCAACACCACAGC	
   2137694	    36	 100.0	    28	....................................	CGTTCGGTGGTCCGTGGGGCCTCGCTGC	
   2137630	    36	 100.0	    28	....................................	TTCTGATCTCTGACTGGATCGAGGCCCG	
   2137566	    36	 100.0	    28	....................................	CTTGCGGGGCCAGGGGGCGATCATGCTG	
   2137502	    36	 100.0	    28	....................................	ACCGAGCAGATGGACCTCTTCTCCGAGC	
   2137438	    36	 100.0	    28	....................................	CATTCGCCGACGACGGCGGCGGCGGCCT	
   2137374	    36	 100.0	    28	....................................	GTGTAGGTCTCGTGCGGACGGTGCGCCG	
   2137310	    36	 100.0	    28	....................................	ACGAGTCGATTCAGACGACGGTCGACGT	
   2137246	    36	 100.0	    28	....................................	AGCGCGCGCGTCTTGCGTGATGGCCTGA	
   2137182	    36	 100.0	    28	....................................	TAACCGGCACGATCGTCACGGTGTACTG	
   2137118	    36	  97.2	    28	..................................A.	TTCTCAGCGTCGGCGAGTAGCTGCACCT	
   2137054	    36	  94.4	    28	.....T............G.................	TACCTGACACTTTTGTCAGTCAGCCCCA	
   2136990	    36	 100.0	    28	....................................	CTTTAGGTAGGGGTGAGCTTTGAGGTTC	
   2136926	    36	  86.1	     0	..................T.....T...T....G.T	|                           	
==========	======	======	======	====================================	============================	==================
        17	    36	  98.4	    28	CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC	                            	       

# Left flank :   GATGGACATGGTATTCCTGCCGTTGCCGAGGCCTTGGCCCAGTCGTTCGGGCGCTACGTGGAGGGCGATATCGATCGTCTGAACGTGCTGTCGTGGCAGGGGCCATCGGTTGTGAGCGTGGGAGATTGAAATGGCGGATGATGCAATGTGGTGTTTGGTCATGTTCGACCTCCCGGTGGAGACGAAGAAGCAGCGCCGGGAGGCGACGAGATTCAGGCATGATTTGTTGGATTGGGGTTTTTCAATGGTCCAGTTCAGTGTGTATGTGAAGTATTGGCCTCTGGGTGGGCAAGATCATGCGACGTTGCGGGCGATTAAGAGTCACTTGCCGAGTGGGGGAAAAGTGAAAGTCCTGGGGCTCACGGATCGGCAGTGGGCCAGTGGCCTGCATTTTGTGCGTGCGGAGCGTAAGGATGACGGTCAGGCACCCGAGCAGCTCATGATTTTCTGATGTGTTTTCATGAGAAAACGTTGCGATTTTGGGTAAAACCTATCCACCT
# Right flank :  CTGAGCGGAGATAATCCGTGATCGGAAATTGCCTAATCAAAATGAGCAAACAAAGTGCTCCTGAACGATGTTCAGGAGCACTTGAAAGCGAGAGGAGATCTTGGTACATGGGGTCTTTACAGCCCGAAGCTGAGGGCAGTCCCACACCCGAAGCCGCTGAAGCGGCTTCCTTTGAACGTCTGTTACCAGACGCCCGACGCATCCTCTCGCTAGGTCGATACTAGCCTAAAAGCTGAGTTTTGGTCAATGAGGACATGAACAACGCTCTCTTGCTGACTGACGCCGGTTGATCATAGTTTCCCGCTCTGAGCGGGAGTGATCATCTTCGAAATAGTGCTGGGGTGCGCACGAGGGTGGCAGCCAGCCCACCTGGGAGTGATCCCCGGGCAGGCGGGCCACCCTCGTCGTTGATACGGGCCGCCTGCACGATGCAGACGGTCGCACCCTCATCGCCCTTGGCATTCTCGAGGCGGTCGAAGCCTGCACCCGCGCCTCCGAGA

# Questionable array : NO	 Score: 3.18
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,-0.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [8-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//