Array 1 1504038-1506163 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029149.1 Bergeyella cardium strain HPQL chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1504038 47 100.0 30 ............................................... TGATCGGGTGTCAGGCATGAGGCGGTCGAT 1504115 47 100.0 30 ............................................... AGTCCTACAGAATAAGCTTCCAGGTCTACT 1504192 47 100.0 30 ............................................... CACCTGAGCTACCAAGAAGATGCAGGGCTA 1504269 47 100.0 30 ............................................... TGCGTCAAAGATGAGTTTGAGGAGCCCATT 1504346 47 100.0 30 ............................................... CTATTTCCAGTTCTTCTGGTAGGGAGTATA 1504423 47 100.0 30 ............................................... ACTCCGTTTTCATCATAGTAATCTGTTACG 1504500 47 100.0 30 ............................................... GCTGGATCTATTATTTTGATGGTAGTGATT 1504577 47 100.0 30 ............................................... AGTTCTAAATGTAACATTTGAATTACTTTT 1504654 47 100.0 30 ............................................... GGGTTCTCTCTGAGCCCTTTCTTATGGTAT 1504731 47 100.0 30 ............................................... TGCTCTGAGTTTATCAAATTCAACTCTAAC 1504808 47 100.0 30 ............................................... CAATTCATTTCAGATGCTATTAGAGTAGAG 1504885 47 100.0 30 ............................................... TAATTCTGAGATAATAGAGCTGTTACTCCG 1504962 47 100.0 30 ............................................... ATTAAAAAAATAATTGAGGATATAAGCCCT 1505039 47 100.0 30 ............................................... GAACTTCGGAGTGTGCCACTCGGGAAAACT 1505116 47 100.0 30 ............................................... ACCTATCTAAATGCTTTAATGAGGCAATGG 1505193 47 100.0 30 ............................................... ATTGTTTTAATTGATGCGTCAAATATACGC 1505270 47 100.0 30 ............................................... ATCGCATTGATATAATCTGTTCCGTCTGCA 1505347 47 100.0 30 ............................................... CAAGTGTAAAATTTGTATTTTCAAGGTTTC 1505424 47 100.0 30 ............................................... GGGAGATTCTGCTGGGTTTTACAGCAAAAG 1505501 47 100.0 30 ............................................... ACACAATAATTTTATGAATACAACAACATT 1505578 47 100.0 30 ............................................... TTTTAACGGCTTTGGTCTCGGCATTCACAA 1505655 47 100.0 30 ............................................... ACTGCTCAACTCGATAGCTTCATCTATTTT 1505732 47 100.0 30 ............................................... CAGGACTATTAAAGAGCCTCCACCTCCCTC 1505809 47 100.0 30 ............................................... AATACTTAAAAGGCACTAAATCACCGTATA 1505886 47 100.0 30 ............................................... TAAATGAAAAGAGCATAACAATAAAAGAAT 1505963 47 100.0 30 ............................................... TATCCGCTTTTCTTTAGCTACTGGTGACTC 1506040 47 100.0 30 ............................................... GGGAGTTATGAGTCGTGAGACTTACTTTAA 1506117 47 80.9 0 ...................................AT.T..GTTTTG | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 99.3 30 GCTGTGTGATATCCACAAAAGTAATCAAATTGAAAGCAATTCACAAC # Left flank : GATAGACTTAATCGTCCATTAATAGTTGCGGTAAAGATGACCGTATCATCATTGTACAAGTGCTATACAGGGGAGAAAAGACAAATATCCTATCCTGAAATGTTATGAAAAATGAACGCTTAAATGCATATAGAGTTATGTGGGTAATGGTTTTATATGATTTGCCTACCGATTCCAAGGCAAGTATGAAAGCAGCCAATTTATTTAGAAAACAATTAGTTGATGATGGTTTTTCTCTCTTTCAATTTTCAATGTACATTAGGCATTGTCCAAGCAGGGAAAATGCAGAAGTTCATATCCGCAGGGTAAAAGATATTCTACCTAAATATGGTAAAGTAGCGATAATGTGTATTACGGACAAACAGTTTGAGGGTATTGAAATTTTTTATTCTAGAAAGCAAGAATTGCCTCCTCCTACTTGGCAGCAGCTCGAATTATTTTAAATTTTCAATTCTGATTAAAAATAAAAACCTTTGATTAACAAAGGTTTTTATTTTGAG # Right flank : GTACTTAGGTAGCAGAGAGAGGTTAAATTAAATTATCTTAACTTTGTCGCCATTTTTTAATATTCATCAGAAAAACTAATAATAAGATTCTTAAAAATTCAGCTTATGAAGTTCTTAAATTCTTTTTTGGGACTTGTATTATTGGCTTTTATGCAAATTTTACAAGCTCAGCAGTCTGTTAAAAGCATTTTGCCGTTATTTTCACAGAAAAAACAGGTGGAATGGGCGGTGCAAACAGATAGAAATGAATCGGTACCCGTAAAATGGTATGAGCGTGAAAGCTCATTTGCAGTGGAAGGAATCCGAACTTTTGTAGGATACTATAATGAACAATTGGTAGGGGCATTGTCGGTGCAGAGAAATGATATTTCTGGAAGTATTCAGTGGGTAGGAAAGGCTTATCATATTGATACTCGACAGGGGAAAGTTGTGATTAGTACCTCAGGTGCAGATATGAATTGTGGAACTTGCTCTGGGAACTTTTGTGCGTCTGATAGCGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGTGATATCCACAAAAGTAATCAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //