Array 1 52498-50215 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHRZ01000034.1 Bifidobacterium longum subsp. longum strain MCC10078 contig0034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 52497 36 100.0 28 .................................... ATGAACTTACCACCACTCCGTCGGGCGG 52433 36 100.0 28 .................................... ATGTTCGTTATAGCCACATCGCCGGCCG 52369 36 100.0 28 .................................... TTGCGCAGGTGCAGGACCTTCAACACGC 52305 36 100.0 28 .................................... GCGTGGTGGAAGGACAACCCCATTACCC 52241 36 100.0 28 .................................... TCAAACTCGTACACCTGTGCCACGTTCC 52177 36 100.0 28 .................................... GCTACTGCCGCCTGTAGTTCGCCCTCGA 52113 36 100.0 28 .................................... TCCATTGACGCATTGTACTGGTCAAGTA 52049 36 100.0 28 .................................... TATTCGTTGCCGATGATGTTGCGGAGCT 51985 36 100.0 28 .................................... CGTGCCTATGCGTTGTTTGCCGCCTTCC 51921 36 100.0 28 .................................... CTGAGATGCGCGCTGGAACACGCTCAGT 51857 36 100.0 28 .................................... AATGCGCTGAAATACGGGTTGGCCAACG 51793 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 51728 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 51663 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 51599 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 51535 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 51471 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 51407 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 51343 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 51279 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 51215 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 51150 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 51086 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 51022 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 50957 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 50893 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 50829 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 50765 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 50700 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 50635 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 50571 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 50506 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 50442 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 50378 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 50314 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 50250 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 36 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //