Array 1 63495-64530 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MAQE01000015.1 Aggregatibacter aphrophilus strain ATCC 7901 Contig_5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     63495	    32	 100.0	    35	................................	GCAAATTGGCACAACCGCCTAGCTGTCTAATCTCT 	
     63562	    32	  96.9	    36	......A.........................	CTTTAACTGCATTGATAATTACACCTTTTGCTAATG	
     63630	    32	 100.0	    36	................................	AAAATCACGGCAGATTGGGGCAACGTATTACTTTAG	
     63698	    32	 100.0	    36	................................	CATTTTTCCGAAATGGTGTTTTTAATGCTGCCCCAA	
     63766	    32	 100.0	    34	................................	GTTTCTCCTTCGATTTTTGTCATCAACTTTTCAA  	
     63832	    32	 100.0	    36	................................	CGCCTTTAAATCTTGGATTGTCATGCTTTTAACGGC	
     63900	    32	 100.0	    35	................................	GCTTCCTTCGGCCGCAATCGATGTGGAGGCGGGTT 	
     63967	    32	 100.0	    35	................................	TTCGCCGGTGTCGTCCTGCTCGTATGCGCCCATAA 	
     64034	    32	 100.0	    34	................................	TTTTTCTTAGCTTTGGTTCCGTCATGCTTGCCTT  	
     64100	    32	 100.0	    35	................................	CGAAAAACTTTGTGACACATCAGTGGTCAGGCTTG 	
     64167	    32	 100.0	    35	................................	AGTTACGACGACAAAGGCAAACCAATCGAACTCAG 	
     64234	    32	 100.0	    34	................................	CCTTGTGGCTACTGCCCCCGCGCCCTTGCTGATC  	
     64300	    32	 100.0	    35	................................	TTTAGATCTAAATGTGATTTTTTAATTCCTTGCTT 	
     64367	    32	  96.9	    34	........................A.......	AAACGCCTGATTTAGAAAAAACATTGAATGCTGC  	
     64433	    32	  93.8	    34	..........C..T..................	ACCACGGGCATTTTTTAAACCATGAAAAATAGCA  	
     64499	    32	  93.8	     0	..........C..C..................	|                                   	
==========	======	======	======	================================	====================================	==================
        16	    32	  98.8	    35	GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC	                                    	       

# Left flank :   TTGATGAGATAAGCTATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCGTATCGCAAAACATTGTTTAGATTACGGCGTGCGGGCGCAATATTCGGTATTTGAATGCGATGTCACGCCTGACCAGTGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACCCTACATGTGACAGCCTGCGCTTTTATCATTTAGGCAGTAAGTGGCGTAATAAAGTGGAGCATCATGGAGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATCAAAACTCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATGAGTTAATCTATTTGTATAACGGCGATGCGGCCGTTATACTGAGTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATACGCTGATTTTTCTTGCTTTTTTAGGTAGGGA
# Right flank :  CAAGATGTCGAGCAAGTCGCGCTCATTTTGTGCGGTGGTAACCATCTTCGGGTGAGTATATATTTCGTCTTTACGAAAAATAAGTGATCTATAAGTTTCAAGCCTTTCTACAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTGGGGTTAGATCATTTTAACCGCTCTTTTTGTTGACCTATGCTAAAATATTGTTACATTTTCGGAATTTCAACGCCCGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTACCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCTGCAGCATCGCCCACCAACTCAGGATTATGCACAGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTGCGTCCACCCAGTAAATTTACGATTTGCACTACTTGCG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.80,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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