Array 1 73120-71414 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPCL010000001.1 Streptococcus salivarius strain D55t1_190419_H2 NODE_1_length_332715_cov_19.4981, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 73119 36 100.0 37 .................................... TCAGTAACTTCTTCTTCTCCGTCATAAACCATTTTGC 73046 36 100.0 35 .................................... TGAGTGTTACATCACCATTAGAAGTATTCTTGATT 72975 36 100.0 36 .................................... AATTGACCGCCTGTGATAGACCAATCATTTAAGAGA 72903 36 100.0 35 .................................... GTTTTGCTTCAATAGTTTCAAAAGTCATTCTTTAT 72832 36 100.0 39 .................................... TTAACATAGCTTTTTCATCATAGTCAGGTTTCATGTGGT 72757 36 100.0 38 .................................... CGTTCTGTCAATCCCATGAGCGCATTTTCAGCGTCATG 72683 36 94.4 37 .............TC..................... ATTACTGGAAGGATACACGCTTCCAGAGGGATGGTTA 72610 36 97.2 38 ...............T.................... CGTTTGAGAACTACTCTCTCTCCAAAAGCTTAGGTTTT 72536 36 91.7 36 .............C.G....T............... GTATTGCTCAGGCAAGCTCGCTTGAGAAGTTTCTGA 72464 36 97.2 36 .....................C.............. TTTAGCGTCAATATGATGGGCTTTTGGAAGACCTGC 72392 36 97.2 36 .............C...................... GATAAATATTAATTTATTTATCATAATGACGTATTT 72320 36 97.2 39 .............T...................... ACATTACATTGAAGCTCTAGGCGTAGATTCTCAAAGCGT 72245 36 97.2 36 .............C...................... GGTCAGTGACACACGCTTGTATTCTGTCTTAAGATG 72173 36 100.0 38 .................................... TTCGTTTTCAGTAAGTTTCTTACTTTCTTTAGCATACT 72099 36 94.4 38 .............G.......C.............. AGACTCTCCATCGTTTTCAAGTCTATGAAATAACCGCC 72025 36 97.2 34 .........................A.......... CTAATTTTGTTTTCCTTACAATAATCAACAATTT 71955 36 97.2 37 .............T...................... TGTTTTGTTTGACATAATAATGTCCTCCTTAATTTTA 71882 36 91.7 34 ........T....CC..................... AAAAAAGTAACTTAGTAAAGTTTTTTGGGGAATT 71812 36 88.9 35 ........A....T.......C..........T... ATGCTATCGAATTGGTCTGACAGTGGTTTGAATGG 71741 36 88.9 38 .....G.......T......AT.............. TCTTATTAATTGCCATATTTAATTCACCTCTTAATTTA 71667 36 97.2 34 ................................T... TTAGCGTCAAAGCCGTCTGCTCGCACATTCCATG 71597 36 86.1 37 ............CTC......CA............. TCTCTATAACCTTTCTTAGTCCAATGGCTACGTGGGG 71524 36 88.9 39 .....G.......C.G................T... ATTCAAGTGCCAAGGTCTTATCCTTGTACCATGATAAAT 71449 36 88.9 0 ........T....G.......T..........T... | ========== ====== ====== ====== ==================================== ======================================= ================== 24 36 95.5 37 GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Left flank : AGAGTTTGATTAGGGCTTTTAGAGAACTCGACCCAAGTCTTTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGCGAAGAAGAACGTGAGTTTGCCAAACAAAAAACCATGTTTTGTCTGATCATTTATGATATCCGAAGTAACAAACGCAGACTTAAACTGTCCAAATTACTTGAGGGTTATGGCGTGAGGGTGCAAAAATCCTGTTTCGAGGTCGACCTGTCAAGAAATGACTATCAGTCTCTCCTTAAGGATATCGAGAGCTTCTACAAGGCTGATGAAGAAGACAGCATAATCGTATATGTGACAACCAAAGAAGAGGTGACTAGTTTTAGCCCCTACAATAGTGCCGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTGCAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCTAGCAACTGTCTAGGGCACAAGATATGGG # Right flank : TTTTAAGGTATACCCCATCCAAACCGCATAATCTGATATAAACCTATCCATCTCGAGGGGACTTTTTTGAAAATTTTGAAAATAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAAATTAGTATTTACTTTTAAAAGGATCGACCATCCTGCACAAGATTTGGCTGTTAAATTTCATGGCTTCTTGATGGAGCAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAATCCCTATGCAACCAAGATAATCCAAGGGAAAGAAAACACGCAGTGGGTTGTGCATCTGCTTACAGATGACCTCGAGGCAAAGGCTTTTATGACCTTATTACAGATTAAAGAGGTATCCTTAAACGACTTACCTAAACTCAGTGTCGAAAAAGTTGAGATTCAGGAGTTGGG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //