Array 1 5282-5491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000029.1 Streptomyces buecherae strain AC536_RSS858 NODE_30_length_70565_cov_46.012287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5282 29 96.6 32 .........................T... GGGCTGCGCGTGCGCGGGCAACGCCTGGTCCT 5343 29 100.0 32 ............................. CCGGTTCCATCCAGGTAGTCGGCGCGCACGGT 5404 29 93.1 30 .....................A...T... GCGCGCGCCGGTCACAATCAACTGCTCAGG 5463 29 96.6 0 ........A.................... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGGTCCCCGCGCGTGCGGGGGTGGCCCC # Left flank : TACCTCCTCTACCGCTGGGCCCTGCGCCGCGACTGGCGCGCGGGCGCCATCCTGGGCGCCACGGCGGCCGGCCTGCTGCCCTGGTTCGCCTACCAGGACCGCACGATCTTCTCCTTCTACGCGGTCGTCTTCATCCCGTTCCTGTGCCTCGCGGTCGCCATGATGCTCGGCGCCATCATCGGCCCCCACGCCGCCACCGAACGCCGCCGCACCGTCGGCGCGGTCGGCGCGGGCGCGCTGGTCCTGCTGATCGTGTGGAACTTCATTTACTTCTTCCCGATCTACACCGGGCAGGTGATTCCGCTGGAGGCGTGGCGGGATCGGATGTGGCTGGACACGTGGATCTAGGCGGGCGCCGCTGGTGGGGGCCGCTGGCGCTGGGCGGGCGCGGGGGCGATGGGAGGACTATGCCGGCTTTTCTGGGATTGGCCGATAGGTCGCGATCGGCGAAAGTTGCAGGAAACCGGGCTGTCGCCGGATAAACCCGCAGGTCAATTGCT # Right flank : CATCGACGCCGGCCTCAACTACGACGAAGCGGCAGCGACGACAGCCGGACCCCCGACAGAGTGTCAGTGGGATGGTCTACCGTCCGACGCATGGCCACCGACGCGCTTCCCATCAGGCCGGGTGACGTCCACACGCGCGAGGAGATCCAGCCCGTGCTGGGCGGCAGCCTGTACGGCGGCATCGTCCCGTCAGACGAGAAGGCCAACGTGCTGCTGTTCTCGTACGCGCGGGGCGGGGCCAGGTTCGGCTACCACGACGGCTGGCTGCGGGAGGAGGACGAACTCGGGCCGGTCTTCGAGTACACCGGCGCGGGCAGCGGCGACCAGGTCTTCGGCGGCCGGTACGGCAAGGGCAACTCGGCGATCCTCGGCCACGCCGACAGGGGGCGCACGCTGCACCTGTTCATCGCGGTGGGCACGGTGCCCGGCGGCCGGACCAAACGACACCGCTACGTCGGGGCGTTCACGCTCGACGTAGCCGAACCGTACGTGGTGCGGCG # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 22780-22930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000046.1 Streptomyces buecherae strain AC536_RSS858 NODE_47_length_50850_cov_45.221809, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22780 29 96.6 32 ............................T CGCCGCGCCGACGCTGCGCACGACCCGCACCG 22841 29 100.0 32 ............................. GGCTTCCGGGCGCTTTCGCTGACGCGGTGGGC 22902 29 89.7 0 .....................GCA..... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 CTGGTCCCCGCGCACGCGGGGATGGCCCC # Left flank : CCGCCGCGTGTACGCGCGGCTCCGTACGCTGAGCTCATGGTTGAGAACACCGTGCCCGTACGGGAAGCCCGCGCGCGTCTGGCGGACTACATCAACCGGGCCGAGGAGGGCGTTCCGACCGTCATCACGCGCGACGGCGTATCGGTGGCGGCCCTGGTCCCGATCTCGGACCTCGAAGCGCTGGAGGAACTGGAGGAAGCGGCCGACGTGTTGTTGGTGCATGAGGCGGAGGCGGTCCTGGCCGAGGGCGGGCCGACGGCGACGATGGCCGAACTACTGGCGGACCTGTTCAGCGAGCGCGGTGCGGGCGCGGCGTGAGGTACGCGTTCGGGTTCACTGCGGCAGCGCAGTGGGGGCCTCGGGCGGCACCGTGGGCTGAAGGGCCTATTCGCTCGTATAAACCCTGCGTGAGCGATTTGGCGAGATGGGGCGATAGGTCGCGATCAGTGGAAGTTGCAGAAAACTGGGGTTCCGCGCGCTAAAGCCGCAGGTCAATTGCT # Right flank : CCGGGCGCCGACAGCACCCCCGGCAGGATCGCCGGGGGTGCTGCTCGTTCCGCAGGTCACCTTGCGAGTGTTTTACTCACATTCACCGTGGTCAACGACCATGATCACGGGAGGCGCAACTGTGCGCGATCCCGTCCAGAATGTCGTGCTCGCTCACGACCACCTCGCGCGCGCCCGCGCGTTCCATTAGGGCCAGCAGGACGAGCGCGCCCGCGCCGATGACGTCCACGCGGCCCGGGTGCATGACCGGGATGGCGGCGCGTTCGGCGTGGGTGGAGTGGAGGAGGCGGTCGGTGATCTCGCGGACGCGGTCGAGTGGGATGACCGCGTGGTGGATGGCGGCCGAGTCGTACGCGGGCAGGTCGAGTGCGATGGCGGCGATCGTGGTGACCGAGCCGGCCAGGCCGACCAGGGTGTAGCCGCCGTCGGCGGGGCGGAGCGGGACCGTCTGCTCGACCGTGTCGAGGGCGGCCTCCACGTCGGCCCGTATCGCGGCGATC # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13748-13959 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000099.1 Streptomyces buecherae strain AC536_RSS858 NODE_101_length_46263_cov_42.389965, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 13748 30 100.0 31 .............................. ACGCATGGTCGAACGACGGAACCCCCGCGCC 13809 30 100.0 31 .............................. GGAAGGACCCTCCCGCCGCCAGCGGGTGGAA 13870 30 90.0 31 .....................G.A.....C TTGTCATGCCGACGGGTGCCCGCGTGGAACA 13931 29 76.7 0 .....T...-....C..........G.ATG | ========== ====== ====== ====== ============================== =============================== ================== 4 30 91.7 31 CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Left flank : CGCTATCACGAGTACGGCGGTGCCGAGACCCTCGTGGTCGAGCAGGCGCCGACCCCCACCCCGGCCCCGGCGAGATCCGCGTCCGGGTGGCGGTGGCCATCGTCAACCCCGTCGACTGGAAGGTACGTTCCGGCGCGGTGCGCGACCTGCTCCCCGTGGACCTGCCCGCGATCCCCGGGCGCGACGCGGTGGGCGTGGTGGACGAGATCGGCGCGGCCGTACGGGGCGTGAGCATCGGCGACCGCGTCTTCGGCCTCGGCGGCGTCACCGGCGCCACCGCCGAACTGGCCGTCCTCTCCGCCTGGGCCCACGCCCCGGCCACCTCGAGGGCTGGGTGTCGTTGCGTGGCGGCTTCGCGCATGGGGGTGGGGATAGCCTGGGGAGTCTGGTGAGTGAGGGGGAGTGTTATGGGTGTTCTGCGGGACTTGGGTGGTAGGTCGAAGTTCGCGGAAGTTACAAGAAACCGGGGTGGCGCGCGGTAAAGGTGCAGGTCAGTTGCC # Right flank : GCGAGAACCCGAGCCTGGCCTCCCGTATTCGCCCCCGTGCAGGCAGACCAGCGAACTACGAGCCCGAAACGAACGCCTTTGTCTCGGCAAGCGCCGCGTCCCACGGAAACGGACGCTTCTGGCCCGGCTCGTTGAGAACGAACCCGCCGTCCCCGTACAACACGCTGACCCCTACCGCACGCAGCTCCGCGACGGAGCGTGCGAACTGGGGATGCTGGGCGTACGCCGAGTTCACGCACGGCATCGTGATCAGCGGAATGCCCTTGCCGATGCCCTCGGCTACGACACCCACCGGAAATGACGAGGTCAACCCTAACGCCCAGGCGTTGATGCTGTTCATGGTGATCGGGGCGAACAGGATGGCATCGGCTCTGGGCCAGACATCAGCCTCACCCGGGCGCTTGTACCGAGACCGTACGGGGTAGCCGGTCAGCTCTTCCAGCTCCGCCGCCGCGTCCGCCAGCCAGTCCGCAGCGGTCGGCGTCAAGCCCGCGCACACG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18947-19109 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000099.1 Streptomyces buecherae strain AC536_RSS858 NODE_101_length_46263_cov_42.389965, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 18947 29 100.0 43 ............................. CGCGCCCCGGCCGGGAAGCCGGGACGCGGGGCCGGTGCGGTTA 19019 29 100.0 33 ............................. CCGCTCGATCAGCAGAGCCGTCCGCTCATCCTG 19081 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= =========================================== ================== 3 29 98.9 38 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : GGTCCATGCCAGTCGCGTACCAGGCGAGCGCGAGTTGATCGAGCGCACGGCACGCCGCTTCGCACGCCTCGTCCGGGCGACCTGCCGTCGGAGTCCATCACCGGTCAGCATCAGCAGCTCAACGCTGGTGCACTAGCCACGCGGCCCGCGACCATCATGGCCGCCACCTGCGCTACACCGCCCACATCACCTTGCGGTGGTTGGCCACTCCCGGTGAGGGCATCGGGCCCATCGCGCCGTAGGCGGGCGAAGGCGGGGAACGTGAGGTGTCGTTCAGGCGCACGTCGCAGTGAACCGCCCATTGGTGGCGGGAAGTTGCGTGCCCCAAGAGGCTGGTGTTGGCGTCCGGCTCATGCGCGGAGCGGCCTGCGGATACGCTGCGAACACCGTCTTGCCGGGAGGTTGAGGTGAGCGTTATGCCGGGCTTGGGCGATAGGTCGGAGTTCGTGGAAGTTGCAAAAAACCGGGGTGCCGCGCGATAGACCCGCAGGTCAATTGCT # Right flank : CCAGCCGCCGCCAAGCGCTGTCCAAGCCATCACACCCCCACCGCCCCCGCAGTTACATCGTGGCCCGGTCCGAGGTGGCATGCAGCGAACCAAGCAGACTGAGCGCCTGGGCGCTGGGGCTGGCGGGTTCGGCCTGGTAGACGACGAGTTGTTGGCCGGGGGCGTCGCGTACGTCGAAGGTCTGGTAGGTGAGGGTCAGGGCGCCGACATCGGGGTGGAGGAAGTGCTTGGCGTCCTGGGTCTTGCCGCGCACGGCGTGGGTGGTCCACAGGTGGGTGAAGTCCGTGCTGTGCTCGGTGAGGGTGTGGACGAGTTCCCGCAGCCGCGGGTTGTCCGGGTCGAGGCCGGCCGCCTGGCGCAGGTGGGCCACGGTGGCCTGCGCCGTGCTGTTCCACCGCGAGTAGACCTGTCGTCCCGCCGGGTCGAGGAAGACCATGCGGGCCAGGTTGTCCGCCCGCTCGAAGGGTGAGTGCAGGGCCTCGGCCAGGGTGTTGGTCGCC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 29075-29347 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000084.1 Streptomyces buecherae strain AC536_RSS858 NODE_85_length_105603_cov_43.670624, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29075 29 100.0 32 ............................. TGCGTTACGACCTCCGTGCTGCCCGGACAGCT 29136 29 100.0 32 ............................. TTCGCCCGCGTGCTGGAACACGCCGGCGGCAC 29197 29 93.1 32 ......G.......T.............. CTCGGTGGCTTCACCGACACCAGCGTCAAGTT G [29202] 29259 28 96.6 32 .........-................... GGTGAAGTGGTCGTGGCACCGGGCGAGACGAT 29319 29 93.1 0 ........................CC... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : CGCAGCGCCACCAGCGGCTCAAGTCTGGTGCGTTCGATGGTCAGTCCGGTGCGGGCAGTCTCCTTGAGGGCGCGCAACCAGGTCATACGGCGAGAATACGGCGCTGATCACGGCAAACGTGTTGGGGCCCACGGGGCGCCTGGGCGGCGGGCCAGTCGGGACGACGCGCCCTGCGCGTACTGGGCCGGGGCGGGTCGGGCGGCGCCGGCCCCCCTGGGCAGTTCGGGCCGGGCTGGAGCGGGCGCATTGTCACGCGCCGCCTCCCGTGTGCGGCCTCCGTCCGCGCGGCGTCCGCGAGTCGCGGAGTACGCGGGTGGGAGGGCAACCGCGCGCGGTGCGGGCCGCGCGGTGCGGGGGTCGGCCGCTACGGTGGGGGCTGGCCGCCGGGCGACTTGGCGGTATGGGGCGTTGGAGGGAGGCGCGGGATGTGCGTTATGTCGCGATCGCAAGAAGTTGCAGAAAACCGGGTGTGCCCGCGCTAAACCCGCAGGTCAATTGCT # Right flank : CCACAGGCAGGTGGCCCACCACAGGGCGAGCCACCCACCCGAGGCGCGCCGCAGGCGATCACCCGTTGGGGGCTTCGCAACTGATGTCCATCAGCTTCATCGGCTTGCTGGCGTCGAGCCCGACGTACGCGGTGAAGACCTGGGTGTCCTGCCCCTTGCCCCAGTGGGTCGTCACCGGCGCCCACCCCACGCCCGCCGACTGGGCCGTGGTGACCGGTCCGATGTCGATGGCCTCGGGGGTGTTCTGGGCGCAGAGCAGCAGGTCGTACTCCGGCGTCTGGGCGGCCTTCTCCTTGAGTTCCTCGGTCACCAGGTGTTCCCGCTCCCAGGCGCTCGGGCCGTGGTTGCCGTAGAAGCCCTTGAGGAAGTGGTGCACCTCCTTGGCGTCGTACTGGCGGCCGGTCGTCCCGGACCCGGAGCCGGCTTCCGAACCGGAGCCCGACTGTCCGGCAGCCGCCACGGGCACGGCGGCGAGGCCGAGCCCGAGCCCGACGGCGGTC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGTTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 55535-55078 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000007.1 Streptomyces buecherae strain AC536_RSS858 NODE_8_length_111912_cov_46.062691, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 55534 29 79.3 153 ..C...A.....G.C.G........C... CTACTCGCGGGATGGGGGCGGCTTGGGTCATGCTGGACCTCCAGTTGAGTGCTGGGTGGGGCGGCCCGAGGCTTTGGCGAGACGCGGGCTGCCCCGTTTGCTGAGTTGGGTGAAGAGCTGGAATGGGCGCTGTAACGTCGCAGGTCGCGAAGG A,G [55514,55524] 55350 29 100.0 32 ............................. CTCCAGAGCCTGGCCAAGCGCCGCGACGCGGT 55289 29 100.0 32 ............................. TGGGCCTACGCGATCACCCCTCTTGGGGGTGT 55228 29 93.1 32 ............T..........T..... TCGGAGGACCCGCAGACGGTCTGGACCCGCGC 55167 29 96.6 32 ....................C........ ATCATCGAGACCGAGGCGCGCGCTGTGCCCCT 55106 29 69.0 0 T...........GTT......T...GGTT | ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 6 29 89.7 56 GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : GCAGGGGGGCCAGGGTGCCGGTGCCGTGGCCACGCCACCGGGCGTAGGCCATCAGGCTCTTGATGTCCACCCCGGGCCGGGCCCCGTTGGACGAGCGCATGGCGCCCTGATAGATCCAGTGCTCACCGCGCGTCGTGGCGACTGTGAGCGTCGGCGGCAGGCTGTCCTGGGCCCAGGTAATGGCGGCCGGGTCATCCAGGTCCACCACGGTCAGCCCGGCCCCACCGGGGTGGTAGGCGACGGCTACAGCGGTGCGCCAGACGGGGGCCCAGTCGCGGGAAGTCAGGGTGGCGGGGTCGATGGTGGCCGCGGCCCAGGCGTGGCATGGCCGGGGGCACCGGCACGGCCCTGCGGCCAGCATGTTCGGCCGCCCCCCGCACGCGTTCCCCTTGCACGCGGCGCAGTTGGCCACGGGTGCCTTGCCGGCGCCGCCGTGGCGAAGGGGCAGCACGGGCAGGCCACGGGCCGCGAGGGCGAGCGCGGCACGCAGGGGGGTGTCA # Right flank : CTACTGGGTGGCGATGACGGTGGTGCTGGCGCGCGTGTCCGGGCCGGGCGTCCGGCGGCTGTCCGGTGCCTGTCCGCTCGCCCGCGTACGCGCTTTGACCTAAGGAAACGGGCCCGCAAGTGCGGCCGGACGGCCACCGGACGCCCCCGAGCGGCGTTCGGTGGCGTCCGGAACGCGTCCGGGCTGGTCAGAGCCATCCGGTGGTTCGTCCGGTGGCGTCCGGTGTTAGGCGGCGGCCAGTTCCGGTTGGAGGAGGAGGAAGACACCGGGCTCCTCGTCATCGACGAGGTGTTGGCCCTCGTCGGCCAAGGAGTTGAGCTGTTCGGCGACCCAGGTCTTGCCGCGGCCGATGCGGCCCGACTCCCAGTACGGCCTCAGGTCGCGCAGCCGCACCGTGTGGGCGCCGTCGGCGCGGCGTTCGTCCAGCACGGCCAGCAGTTCCGCCAGTGCCTGCTCGGTGGTGCGCTCCGTGCCGGTCGCCGCGAACTTGTCGCCCTTGT # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 78765-78918 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000172.1 Streptomyces buecherae strain AC536_RSS858 NODE_193_length_87071_cov_44.532829, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 78765 29 100.0 32 ............................. TGTTCCCGGGTCCGCCGATTGCTTCGCACCGT 78826 27 93.1 37 ................--........... CGACCCGACCCGACCCGACCGACCCGCCCGACTGTTC 78890 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 97.7 35 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : CTGAGCAGTCACCGGAACCCGAACCGTCGCAATCCATCACCGGCCAACACCAGCAGGCTCAACGCTGGTGCACCAGACACGCGGCCCGCGACCACCCCGACGGACGCCACCTCCGCTACACCGCCCACGTGACCTTGCGGTGGCTGGTCACCCCCGGTGAGGACATCGGGCCGAGTGCTGATCCGTAGGCGGGGTGAGGAGGCAGTGCGTGCTGTGGTGTGGGGTGCTGGCGCCTGCGGCGGGGAGCGCATTGGCGGGCGGGTCGGGTGGCCGTGGGCGACGTTGGGTGTGCCGCCTTGCGAACGGGGTCAGCCTGGCCGGCGAGTTGGTGGCCCAACATTCTTGTCCGTCAGCCTCGCGCGTGCGAGCGCAGATAGTCTGTGAAGCCTGCTCAGCAAGGGGGCGTTGTGGGCGATCTACCGAGTTTGAGCGATAGGTCGGAGTTCGTGGAAGTTGCAAAAAACCGGGGTCCCGCGCGATTAAGCCGCAGGTCAATTGCT # Right flank : CCCGCTGACAGATGTCCTCCGTACGCCAGGTTCCTGGGTCCCCCCGCGCGCGGGCCCCCCACCCCCACCCGAGGCTCAATCGAGCCCCGCTCGTGTCGCCCGCCCCGCGTTGCGTGACTCATAGGGCGGCAGCCACCCACCCGGTACCGTGGTCCGAATGACCACCTCGCGGGATCGAGCGGCACGCAGGACCCGGGGAGCCGGGCAGCGCGACGGCGGCGCCCGTGGGGCGCCGCGCACGCTGGCGGAAGAGTTGCGGGGGCGCCCCGACAGCGCGCTCGAACTGTTGCTGCGCGCCCGGCCTGACCTGCTCAACCCGGTGCCGAACGACCTCACCCAGCTCGCCACCAGGGCGGGCACCCGGGCATCGGTCGTACGGGCCGTCGAGCGGTTGGACCGGTTCGCGCTCCAGGTAGCCGAGGCGCTGGCCGTGGCGCCCGACCCGTGCCCGTACGAGACGCTGCGCGACCTGCTGACCGGCGACCCCGACACGCCCCCGG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15059-14847 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000143.1 Streptomyces buecherae strain AC536_RSS858 NODE_151_length_15220_cov_49.871944, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15058 29 100.0 32 ............................. ACTCCGTGCGCCCGCATCGGGCCCGCCATGGC 14997 29 100.0 32 ............................. ACGTCGTCCCAGTTCAATGGTTCCGGCGGTTG 14936 29 100.0 32 ............................. CTCGACATCGACCACATGGTGCCCCTGGCCGA 14875 29 96.6 0 ..........................G.. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 CTCTGGTCCCCGCGTGCGGGGATGGCCCC # Left flank : GAGGGGGAGGGTTCCGTCGGGGGCGGGGGCGGGGAGCGGGAGGCGGAGTGAACTTCCGTACGCGGCCGGGGTGATGATGGTTGGCTAGCGGGTGCCGGTTCCGTGCGGACCATGGGGTGTGCTGGACGGCCGATAGCCTGAGCGAGGACCGAAGAACGCGAGGTTGGCGCGCGATATGGTGTCAGATGTACGAGATGTCGGGATCGCAGGAAGTTGCAAAAAACGAGGTGGGGTCCCGGTAACGTCGCAGGTCAATTGC # Right flank : ACTTCCAGCTCGACGGCTTTCCCCAGCTCGTCTTCTGTCCCCGGAGGGTGGCTGCTCGCCAGTCCCCGCGCGCCACTGCGACTTCCATCGGGCGCCGCGCCTCACATGGTCCTATCCCGATGCGCTCGCTGTCTGTCATGCCAGCCGTCGATGGCGGTGACGCGAGCCAACGCTGCTTGGTGTTCGTCCTCCGACACGACACCGTGCTCCACTTCGAGGCGTGCGGCCAGCTCGCGCAGTCGGTTCATGTCGTCCTGGTGAGCAGCGGCGGCAGCGATGTAGTCGGTCACCCCGCGCGCGCCGGGGCGTAGTTCGATCGATGCCACCGACTCTTCCGGCACGGTGATGGTGATCTTTCGAGCAGCCATACGTTGAGGATGCCATGTGATGTCGAGCTTGCAATCGGCGTAAGACATACACGTACCGGCGACACAGAGAGAGCTGATGCATCACAGCACGTGGAGGATGCGTCGGGCTCGGAAGCTCGCGGGAGAGGCGGT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGGTCCCCGCGTGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.30,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 117335-116697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000018.1 Streptomyces buecherae strain AC536_RSS858 NODE_19_length_163863_cov_47.503590, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 117334 29 100.0 32 ............................. TCCGAAGCTCGGATGGTGGGCAGGCTCCACAG 117273 29 100.0 32 ............................. GCGCTGGAGCGCGGCGACCACACCGGGACGCA 117212 29 89.7 32 ..G.....T....A............... GGCACACGGAGGGTTCGGGTCTGCCGATCGGC 117151 28 82.8 32 ...........C.C..T....-...A... GAATGAAGAAGCAGGGCATCTTCAATTGGTCC C [117143] 117090 27 89.7 32 ..............--.....C....... GCTTACGCGTGGCTGCAACTGGAGGGCTTCGT 117031 29 82.8 32 ...........C.CC..A..........G CCGCTGCCGCCGATGATCAGGGCCGTCATACC T [117007] 116969 28 82.8 32 .GT........C.-.......T....... GAGGTGCAGGCCAAACTGGCGCTGGGCCTGGA 116909 29 75.9 32 GGT..........AC......T...T... GTCGGTTACTCGGTCAGCTCCGGGATGCGTGG GA [116897] 116846 28 75.9 31 GC.C.......-.........T...T..G GCCGTTGAGCAGGCGCAGGACGAGAGCGAGC C [116832] 116786 29 82.8 32 AG.........A..C......T....... TGAGAGATCAAGGCCAAGAACGGCACCCCGTC C [116782] 116724 28 75.9 0 GA.........-..C......C...GG.. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 85.3 32 CTCGTCCCCGCGCGTGCGGGGGTGGCCCC # Left flank : CGTTGGAACTCGGGCGCGCGGGCGTCGACTTCCGCGCGATCGGGACGATCAACGCGGTGACTACGGGCCGACCGGGTGAGGCCGCGAACATTCGATGCCCCGTGTGGGCCGGGGTGGGGTCGGAGGACCCGATCATGCCGCCCGCGCAACGGGAAGCCTTCACTGCGGAGATGCAGGCCGCAGGCGTCGATTGGCGACTGGTGGTCTACGGCGGCGCCGAGCACGCCTTCCACCACCCGCCGGTCGACCACGCGGTACGCCCAGGCGTCAGCCACCACCCGCTGCACGCGGAACGGGCCTGGCGCGATGTTGTCGGCCTGCTCGCCGAGTGTCTGCCCGTGCCGGAGTGATGTGTGGTCGGTAACCGGGTCTTCGGCGGGACGCTGGCGGGATCGTGCAGGGGGGCTGTGAGTTGCTTGTCTGGCTTGGGCGATAGGTCGGAGTTCGCGGAAGTTGCAAAAAACCGGGGTCGGGCGCGGTAAATCCGCAGGTCAATTGCT # Right flank : GGCGCGTACCGCAAGCCGGGGCCCGCACGCAGGCTTGCCCTCCGGCAGGCTCGGGCACCCAACGGCTCCCGCTGGCCCGCAAGGCTGGACTGCCCCAGCAGTCACACACACAGCCGATGCCCACCCACCCAGCCAAAGGCCACCCCTACACCCGAAGCCCGCCCACACATCCGAAACACACCCACCCAACAAGACCACCGAACCCCCGCCCACACCCCCCGCTCCGCCCCGTCCGCCGACTCCGTCGTCGGCCAGGACGGGGTCAGCCGTTGCACCGTCGGGCGGTCAGGGGTGTAGCGGGGCCAGCCGGGGTCGCCGGTGGTGGTGAAGGCGACCCAGGCGGCGTGGGTGCGGCGGGCCAGCTCGCGGGGTTCGGCCGCGTCGGGGACGAGGCCGAGGGTGTGGAGGTCCACGCGGGACAGGTTGGCGAAGGCGAACGGGAGGTCCAGGCCGTGGCAGGCGCCGAGGAGGCCGTCGAAGGCGGGGGAGCGCCAGGTGAA # Questionable array : NO Score: 4.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.26, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCGCGTGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 121749-121537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUN010000018.1 Streptomyces buecherae strain AC536_RSS858 NODE_19_length_163863_cov_47.503590, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 121748 29 100.0 32 ............................. GTGCCCTTGGAGTTGTGGCCCGTACGGCCGGA 121687 29 100.0 31 ............................. CGCCTTCTCCCCCGTCGTAGTTCCGGAAACC 121627 29 89.7 32 T....T....................G.. GTCGTGCTCGCGGATGCCGATCGAAGAGGGGG 121566 29 82.8 0 ........T....AG......C...C... | A [121539] ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 CTGGTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : ACACCCGGAGGGCGGCGGCGAGAAACGGAAGCCAGTCACGCGGGGTGCGCTTCCCCGTCTCCCAGCGGCTGATCTCCTGACGGCCTACCGGCTCGCCCCGAACTCCAGCGACCCGACAGACCTCCCGCGCCAACCGCGCCTGACTCCACCCGAGCCGCTCCCGCTCCCGCCTGACGTTCGCCCCGACGCCGCTCCCCATGGGTCCAGTCTGGCCGACAGTTGGCTTACATGTGGGCGCTGGCGTGGGGATGTGGGATGGGTGGTGGTCGTTCCAACCACGGCGAGGGGGTGGGGGCGAAGGGTGGGGTGGCTCGGAGGAGTTGGCGGACTCACGTACTTGTTCGTCGGCGTCGTGCGTGGGGGCCGAGAGATAGCCTGGGTGGCCTGGAGGGCGGCAAGGGGGAGTTTTGGGTGATCTGGCGGGCTTGGGTGGTAGGCCGGAGTTCGCGGAAGTTGCAAAAAACCGGGGTGTGGCGAGATAAAGCCGCAGGTCAATTGCT # Right flank : ACCGATGCGCGCTGCATCACTGGAAGTCAACGGCGCGACAGCCCAACTAGGTTGATCGAGCTAGAAGTTTGTCGCTCGTGTTCGAGCTGGGAGTACCGTTTCAGGTGCCTACGTCAGAACGAGGAGTCCAGTATGTCTGAGACCCCGACCATGCTCGGCGAGCGCGTCCGTGACCTACGTAAGCGACGCGGCCTCTCGCAACAAGCTTTAGCTCGTGCGGCCAGGCTGTCTCACTCAACCGTGCGAAAACTGGAGCAGGGTACTGGCGGGGAAACCAGGATGGAGACCGTCCGCGCCCTCGCTCTCGCCCTGCGCGTGCCGACAACCTACCTGCTGCGCCGTGACGCCGAGGTGGCCAGCCTCCCAACGGAAGAGCGCTGGGAGCCGGTGCGCGCAGCGCTCCTAAGGGCCCCGGCAGCGGAGTACATCGAGGGTGACGCACCCACTCCGGTGGGTGTGAAGGCCGCGCTGCAAGCGGCCGAACCGTTGTTCTCCGAGGA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //