Array 1 35986-22097 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAYJ01000019.1 Brachyspira aalborgi strain PC2777IV PC2777IV_contig19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 35985 31 100.0 36 ............................... AAAAGAAGCATACGAGATATTGTATGAAAATTATTA 35918 31 100.0 36 ............................... GTTTTTACCCATGCCTTTTGTAAACTTTCTAAATAG 35851 31 100.0 36 ............................... GAAAACGAACACCAGCACAAATACACGGTTTACTAA 35784 31 100.0 36 ............................... GCTGAAATTTGTTGCAAAACCTAATACTCTGTTATT 35717 31 100.0 37 ............................... GTGTATTCAACTATGTTGATGCCTGGCGATGTAATAG 35649 31 100.0 36 ............................... TCTTGTACTGTTTCGCTCCTCGCTATGATTGGTATA 35582 31 100.0 36 ............................... CCGGAAGCGCTCGCGCTTTGACCGTCGGCCATTAAC 35515 31 100.0 38 ............................... CATGATAATCAGAATTATATTGATAATCTCGTATCTCG 35446 31 100.0 36 ............................... TGTTTCTTCACCTCCTTTTTAATAGTGTAAAAAATC 35379 31 100.0 37 ............................... TTTATGAAATGTTATTTTTATGTCTTTTTGCCCCTCG 35311 31 100.0 39 ............................... TTTGTCGAACTGAATCATCTTGCAATGCAACCAATCTTG 35241 31 100.0 36 ............................... CGTTTCCTTGATAGCTTGTTAATGTTCCTGCTTCTG 35174 31 100.0 37 ............................... GAGAAGTTTAAGCGCAAAAAGACTGCCTAGCATGTTA 35106 31 100.0 37 ............................... TATATTGGCTGCATCGCCAAATGATTTAGCTCAACGG 35038 31 100.0 38 ............................... CTTCGTAATATTGAGTCGATTGACAAGATAACATCATG 34969 31 100.0 36 ............................... TTGTAAAATCAAAGATTTTACAAAGTTTATTAAAGA 34902 31 100.0 36 ............................... TTGGTATAAGTTATATTTAAATATTTTTTCTTCTCC 34835 31 100.0 37 ............................... ATGCCTTCGCTAAAATCTATCAGCAAATAACAACGCC 34767 31 100.0 36 ............................... AGGGCAGGCTTGCGAGTGTCCCGTTTCGTTATTTTC 34700 31 100.0 35 ............................... ATTGAAGTCAACGGTAATACTCCTTTACCGCTTAA 34634 31 100.0 36 ............................... GCCGTCTTGCATAAGTAAATATCGCTCGTTGTCAAA 34567 31 100.0 37 ............................... GTTCGTTTTACGCTGTCGTTGTTGTCGTTTCAGTCGG 34499 31 100.0 36 ............................... CGTTGTTTGCTTGTTTAATTAAATCGCTATTCATTT 34432 31 100.0 36 ............................... ATAAGTAGTAATAGTGTTGGCAGTCAATTATCGGAA 34365 31 100.0 37 ............................... CTATTCAATTTCACGCTTTTTATTACAGAATAATTTA 34297 31 100.0 37 ............................... GACATATTAAAGAGTAGTCTTCACTTCTATAGTATTT 34229 31 100.0 36 ............................... AATTTGTCCGCAATTATTCTTGTTAATAATTCTAAT 34162 31 100.0 36 ............................... GAGCAAAAATTTCAACAAATAGACTACTTCAGACAA 34095 31 100.0 36 ............................... AGAAGGAACAAAACAAGATTTAAATAGATCACTAAA 34028 31 100.0 36 ............................... ATTTTCTTGTTGTTTTTTATTCCAATCTTTTTGTAG 33961 31 100.0 36 ............................... GACGGAGACGGAAAAATAAGAACAAAAGATAATCTA 33894 31 100.0 36 ............................... ACCTGTAATATTCTCTATAATATTCTATATGATTTG 33827 31 100.0 36 ............................... ACGTTTGCCCCGCTCCCTTTTGCTCCTGCTGTTAGA 33760 31 100.0 36 ............................... TTCGTATTCGACAATATATCTGAAGACCAAAAGCCA 33693 31 100.0 36 ............................... ACAATGTTAGGCGTCACGGAGGGGTTAAGATGAAAA 33626 31 100.0 36 ............................... TTGGCTCGCCTAGTATTTGTTTTGGTAATGATGTTG 33559 31 100.0 36 ............................... CTTAATATATATTGTTCGTTTTTTATTGTTATTATA 33492 31 100.0 36 ............................... GCTGCCATTAGTCTATTCATTCCCGCACTTTGTAGA 33425 31 100.0 36 ............................... CATTATGTATTCTTTTAATTTTGTTTTGTAGTAAGT 33358 31 100.0 35 ............................... CAATTAGATATTCCGAACCCAATCGAAGCGTATCT 33292 31 100.0 36 ............................... AACTTTAAACATATCACACAATCATATTATAAACGC 33225 31 100.0 36 ............................... CTACCAAAATGGAATCCATCAGATATACAAAAAACT 33158 31 100.0 36 ............................... GCTGCCATTAGTCTATTCATTCCCGCACTTTGTAGA 33091 31 100.0 36 ............................... AAAAATGCGGAGTTAGAGCAAAGAGAACTTGATATA 33024 31 100.0 35 ............................... TCGCAGGGACGCTGCAGGCAATTTGGAAAAATCAT 32958 31 100.0 36 ............................... AAGCGACCCTGGCCTTGTTTTTTCTATATTTGTTGG 32891 31 100.0 37 ............................... ATTGTAAACAATCAAGAAGACGATAAAGTCGTTGTCG 32823 31 100.0 37 ............................... CAAGATTCAGGCGAAGTAAGAGAAGATAAACCAACAG 32755 31 100.0 36 ............................... TTCTTTTTGTAGTTTATAGTTTTTTGCGCCTAGCAC 32688 31 100.0 36 ............................... TAAAAATAATGTCGTAAAATATAAATAGATAGAAAA 32621 31 100.0 36 ............................... ATATATGCTGCAGAATTGTTATGCGCAAGCAGTAAA 32554 31 100.0 37 ............................... ATAACAAAATGTATTGCATACTATCCAAATTTAAAAT 32486 31 100.0 36 ............................... GCTCTTTTAAATGCTTCGTATTGTTCCTCGATACTT 32419 31 100.0 37 ............................... CGTAATAGTTCGTTGATTGACAAGATAACATCATCAA 32351 31 100.0 36 ............................... TCTGGATAGATTTGTTCGTTTAGATTTTTTCTAATT 32284 31 100.0 36 ............................... TTTTTTCTATCTATTTATATTTTACGACATTATTTT 32217 31 100.0 35 ............................... GCTATTCTTAACTTTTCAATTAGTGCTTCGTTCGA 32151 31 100.0 37 ............................... TCTTGAACGGTTTCTGACCTTGCTATAATTGGAATAT 32083 31 100.0 37 ............................... CCTTGAATGAGTTGTGTATTCTTTCTCTTGCTTCTAA 32015 31 100.0 37 ............................... AAGAGATCCTGGTCTCGTTTTTTGTATATTTGTTGGA 31947 31 100.0 37 ............................... CTCTTTTTGTAGTTTATAGTTTTTTGCGCCTAGCACC 31879 31 100.0 36 ............................... AGCATGCTAGGAATAACGGAGGGTTTAAGATGAAAA 31812 31 100.0 36 ............................... ATATGTATTTTCACTTGACATATTATACATATCGGG 31745 31 100.0 36 ............................... ATGGGTATCCCAATCTCAGGGACTCTGCAGGCCGTT 31678 31 100.0 37 ............................... TACAATATTTTTGTATTTCCATATAATCCTTAAACTC 31610 31 100.0 35 ............................... TTGAGATTGTAGAAACTCTATGTATCTACTTCCAG 31544 31 100.0 37 ............................... TTACCAAAATGGAATCCAAGCGATATACAAAAAACAA 31476 31 100.0 36 ............................... TTCGTAGAACTAAATCATCTTGCGATGCAACCGATC 31409 31 100.0 36 ............................... GTGCGCGTTTAAAAACTCGTCGTCTCTTATTCCTGC 31342 31 100.0 36 ............................... AATTTTATTACAAACACGGTCTTAGGTGCAAAAAAC 31275 31 100.0 36 ............................... GGTAGTTTATGGGATTTTTTAGAAAATCCCGTAAAC 31208 31 100.0 37 ............................... CCGTATATTCTCTGTATTTCTGCTGCTGCTGCTGCGA 31140 31 100.0 36 ............................... TATAATTGGATAGGTGATTTATTAGCAATACCAAAT 31073 31 100.0 37 ............................... TTTGTCGAGTTGAATCATCTCGCAATGCAACCAATTT 31005 31 100.0 37 ............................... TGAATTGTGCTCTTTCTACTGTGCCGTCTACTATTTG 30937 31 100.0 37 ............................... ACATATTTTAAAAGGAAATTTAAAGCAAGTGTAATGG 30869 31 100.0 36 ............................... TGCTTATTATAATGTTTTTAGGCAGAAAATCAGAAA 30802 31 100.0 36 ............................... ATTTATTATTTAAATAAATTAGATTTAACCGAACTT 30735 31 100.0 36 ............................... GACTTATGTTAAAACTTTAATGCCAAACGATTTGGT 30668 31 100.0 36 ............................... AAAGATAAACAAGGTATGATTATAAGAGGCGTTCAG 30601 31 100.0 37 ............................... GAAATACAAAATCATATTTTTTATTTCTGGTAATCGC 30533 31 100.0 37 ............................... GAAATACAAAATCATATTTTTTATTTCTGGTAATCGC 30465 31 100.0 37 ............................... TTAATTGCTCTATTGTGTTTATCCCTGCTCTTGTTCC 30397 31 100.0 36 ............................... ATATATTCGACACTGTTGATACCAGGGGATGTCATA 30330 31 100.0 36 ............................... CAACTAGACATACCAAACCCAATCGAGGCGTATTTA 30263 31 100.0 37 ............................... AGAAACTACTTCGACTTAAGCCAAGAACATGTATTTA 30195 31 100.0 36 ............................... AGCATACTAGGCAATCTCTTTGCACTTAAGCTCCTC 30128 31 100.0 36 ............................... AAATACAAGAGATTAACAGAAGAAGAAAGAAAATTT 30061 31 100.0 35 ............................... CTACTAAAAACAGCGGACGGAAAGCCAATAATGAA 29995 31 100.0 37 ............................... CCGAGATATCGTGGTCTTCCTAATGTTTCGTCAGTTG 29927 31 100.0 37 ............................... TCGTGTCCTGCTTTGTAGTATTGTTCTTGAATAAACA 29859 31 100.0 37 ............................... GCCCTTACTCCCAAGTCTGTCAAATCTTCTGCAGTCA 29791 31 100.0 35 ............................... TCCTTCGTCTTCTTCTACAGTAAATGATTGTAAAG 29725 31 100.0 37 ............................... ATTATATAGATTATCTTTTGTTCTTATTTTTCCGTCT 29657 31 100.0 35 ............................... ATTCTTTTCCGCTCGCTTTGTTTATTATCTCTTGT 29591 31 100.0 37 ............................... CGCTCTACGATTTCTGTCGGCGTCATAAACCCGTCGA 29523 31 100.0 36 ............................... GAAGTAATAACAATGATTACAAGCGTTATCGCGGGT 29456 31 100.0 36 ............................... CATTATCACATAGTATTATCATATAACAACAAACGA 29389 31 100.0 35 ............................... ACATTTAATAGCATTAAGTTATTTACTTGTAGGTA 29323 31 100.0 36 ............................... TGCTTACTGTGTTATCGTTTAAGTGTCTTTGATGAA 29256 31 100.0 37 ............................... CTTCCTTTCGCTCCTGCGATTAAAGTTCCTTCTTGAA 29188 31 100.0 37 ............................... CTTCCTTTCGCTCCTGCGATTAAAGTTCCTTCTTGAA 29120 31 100.0 36 ............................... CATGGCACTAGTAGACCGTCTGGATATGTTTGTTGG 29053 31 100.0 36 ............................... GCCGTCTTGCATAAGTAAATATCGCTCGTTGTCAAA 28986 31 100.0 37 ............................... CTCTCTTTATAATTGATATTATGATTTTTTAGATAGC 28918 31 100.0 36 ............................... CTTTTTTTATTTTGTATTTTTTATATACTCTTTAAT 28851 31 100.0 36 ............................... TATTTGGTATGGCGACCCAAATTGGAATTATACGAA 28784 31 100.0 37 ............................... CTTCGCATTCGCTACAGCTATATAAGTCTCTGAATAA 28716 31 100.0 36 ............................... TTTTATTCGAGCATTACTTTATGTATAATATGTATT 28649 31 100.0 36 ............................... CTTTTTGATGATCTGCCACACTTCTTTGAATTGCGT 28582 31 100.0 36 ............................... CATTATATTTACTTTTTCTACCTGTTCATCAATTAT 28515 31 100.0 35 ............................... AAATTTGACTTTGTAATTGCTAAAGCTTGGATTTA 28449 31 100.0 37 ............................... GCGCACGCACGAGAACGAGCGCGCACAGGCACGCATC 28381 31 100.0 37 ............................... TATGATAATGTGCGCGCTTCGTATTATTTTCTCCATA 28313 31 100.0 36 ............................... AGCACTTGTTTTGGAAGACTTGTTGTAAAGTAATCT 28246 31 100.0 36 ............................... TGCAACTGCTGGTTTAATCACTACTGGCGTTATAAA 28179 31 100.0 36 ............................... TCGCTTTTTTGGTTCTAAACCATTTTTGTTCTGCTT 28112 31 100.0 37 ............................... ACTTGTGATAATTTTTATCGTATTCATTTTGATTTAT 28044 31 100.0 36 ............................... GCAAACCATTTCTCTAAGAATAATTGAGCTGTTTTT 27977 31 100.0 37 ............................... TACAAATTGTCGGTTTTTATATAGCTTAAGCACATAA 27909 31 100.0 36 ............................... GCTCTCTCATTTTGGTTTGGCGCTGTCTGGAATACT 27842 31 100.0 36 ............................... CCATTTTTATAAACTTATCAAATATTATGTAGTTAT 27775 31 100.0 36 ............................... GCACAAATACACGGTCTATTAAAAATGCAACAAAGA 27708 31 100.0 37 ............................... ACTTAAGATACGCATTTGCTCTACAATTATATGCAGA 27640 31 100.0 36 ............................... GCACAGGAGCTACAGGATCAACAACAAGTTTCACAG 27573 31 100.0 37 ............................... ATTTCAGAAACGGTATATATTGAAGATAAAGAGACGA 27505 31 100.0 36 ............................... GTTTTTTGTGAGCTTTATTTTTTGTAATGCTCGCGT 27438 31 100.0 36 ............................... CTCCGTAAAAATCTGTATTATTCCCACAGTGAGGAC 27371 31 100.0 36 ............................... TCGGTTTTCTCTGTTGTCAAAAATGCTAAAATCAAT 27304 31 100.0 36 ............................... CGTTATAATTTTTATATTTATCGTTTAATACGATAT 27237 31 100.0 36 ............................... AATGGAGCATTTGAAATATATTCTAACGCTATATAA 27170 31 100.0 36 ............................... TCTGCTCCTGCTTTGTAGTATTGTTCTTGAATAAAC 27103 31 100.0 36 ............................... AAGCAGATTAAAGAGTAATCCTCGCTTCTGTAATAT 27036 31 100.0 36 ............................... ATATGTATTTCATCTTGACATATTATACATATCGGG 26969 31 100.0 36 ............................... CCTTTTGCTTTGTTTATTATCTCTTGTTCTCTTTGT 26902 31 100.0 36 ............................... TAAGCTGCCTGGTCTCGTATTTTGTATGTCTTTTGG 26835 31 100.0 37 ............................... TTCCATTTTTATTACGCCTAAGCAAATTAAAGAATAA 26767 31 100.0 36 ............................... TACGTATTCATTATTACTATGGTAGTGATATTTTTA 26700 31 100.0 36 ............................... AAAATACAAAGTTATACTTTTTATTTTTGGTAATCG 26633 31 100.0 37 ............................... GATAATCATATATTTAAAGTCCAAGACGAGCCGCCTT 26565 31 100.0 36 ............................... TATTCACCGCTTACTATATATTTTAATTTATTCTTT 26498 31 100.0 36 ............................... AGCATTGTTGGTAACCTTTTCTTGCTCATGCTTCTC 26431 31 100.0 36 ............................... TTGTCTGCAGAGTCTGGATATTTACTGCTTGCGCAT 26364 31 100.0 36 ............................... TGAATTGAGATCTCTCGACTGTATTGTCAACTATTT 26297 31 100.0 36 ............................... AATATTAGGCTGTTATATTTTACTGCTTCTGTTGTT 26230 31 100.0 36 ............................... ATTTTCAAGTATGAAAATGATACGATTTTGATAACT 26163 31 100.0 37 ............................... AGTAGCAATAAGAACATACAACAACAGACTTAACATG 26095 31 100.0 36 ............................... CAGCGAAGTATTATCGTGCGCGCGTGCGTGCTTCAC 26028 31 100.0 36 ............................... TTTTCTATTTTAACTGGCGCTCCTGCTTGTACTTGG 25961 31 100.0 36 ............................... ACATTTCTGTTAATTGACTTAACAATATACTTGCTG 25894 31 100.0 37 ............................... TCTAACGACTTGTTTAATGCTTGTTTTGTCCCTTCCG 25826 31 100.0 36 ............................... TCTTCCGCCTATGTTTTTGATTATTGTTTGTTTTGA 25759 31 100.0 36 ............................... GTTATATGAATTAGAGCCGTTTGACATCTTATCCCC 25692 31 100.0 37 ............................... GGCAGAAGAAACTCACTATAAAGCGGATAAATTAAGC 25624 31 100.0 37 ............................... AGAACTGATTACTGCATTTACGAGCGCGATAGCGGGC 25556 31 100.0 37 ............................... AGAACTGATTACTGCATTTACGAGCGCGATAGCGGGC 25488 31 100.0 36 ............................... TTTTAATCCTCCTCTTTTATTTCAGCGAAGGTATTT 25421 31 100.0 36 ............................... CCGCTTGATGCTTCTTGTCCTATCGCTAATAGTTTA 25354 31 100.0 35 ............................... CGGCATTCGGAGTAGCTCCAGCGGGTTTAGATTGT 25288 31 100.0 36 ............................... TGTTATTGTGATATACAAGGAATTGAGCTCTTTCTA 25221 31 100.0 37 ............................... TGATAAACAACTATTAATTGAAGGAGCTATTAGACAA 25153 31 100.0 37 ............................... TTGCTATCTATAGCTATTTCATTTTTATTACAATCCG 25085 31 100.0 36 ............................... CCCTTATTTTTAAGATAAGAGAGGTTTTAAAAGAGT 25018 31 100.0 36 ............................... TAGGTTTTTTTGTAGATTTGCACATTAGCTCTCTAC 24951 31 100.0 36 ............................... ATTAACATATGCTATTTGGTCGTCTTTTAGTTTTTC 24884 31 100.0 37 ............................... TATTTTCATATGATAGGCTTACTTAAAATAATCGGAG 24816 31 100.0 36 ............................... TGCTGAGTTTGGTTTTCTTATTTTCATCTTAAACCC 24749 31 100.0 36 ............................... AGACATATCAGCGTATAATCTTCACTGTTATAATAT 24682 31 100.0 36 ............................... TGTCCTCCGTATATTGTTTCTGGTTTTATGTACATT 24615 31 100.0 36 ............................... GAAGTAATAACAATGATTACATCGATAATAGCTGGA 24548 31 100.0 36 ............................... CTGCTGTAAATACATGTTCTTGTGATAGGTCAAAAT 24481 31 100.0 36 ............................... AACGGAATTGGATATTGCAGTGCTTCGTTGGAAGGA 24414 31 100.0 36 ............................... AATAATTTAGATGAATTTGTTAAGGGTTTAATTGTG 24347 31 100.0 36 ............................... AACGAACCTATGAAGGATGAAAATCCTATAAATGAG 24280 31 100.0 36 ............................... AACGAACCTATGAAGGATGAAAATCCTATAAATGAG 24213 31 100.0 35 ............................... ATACTTGTTGGTTATTTACATTTCCTTGCTCATTT 24147 31 100.0 35 ............................... GCGGTTAGGTTCGTATGAAGCGCAATTCAAATGGT 24081 31 100.0 36 ............................... AATAGCAATCAATCCCGTTTGTCGTTTCAATCGTGG 24014 31 100.0 36 ............................... GCTTGATTAAATAAGCCTTCTTTTTTACCTACTCCG 23947 31 100.0 35 ............................... AAAGGAAATGAAAAACATAATAATCATTGGAATAG 23881 31 100.0 37 ............................... CTTTGGTTATTACAGAAAGATAGATTAGATATTCCTA 23813 31 100.0 36 ............................... AAGGCGTGCGGGCTTTATATCCAGCTTGCCTGAAAG 23746 31 100.0 36 ............................... CTATTTCAAAAACTAAAATTATGGGAACGAATAGCT 23679 31 100.0 36 ............................... CAAGTTGACGGAGAGAGTTTTTATATTCTTTTAAGG 23612 31 100.0 37 ............................... TCCCCAATTATATTCTCGGCCTTCCATTTCAAGGTAT 23544 31 100.0 35 ............................... ATGGTTGGGACGATAATGCCGACTGCTACGAAAGT 23478 31 100.0 37 ............................... GACGGCACGGTTCAAGTCGCCCTATTCGGTTCGGGCA 23410 31 100.0 36 ............................... CTCATTAAAAATATGTCGATTAATATTAGTTTATCG 23343 31 100.0 37 ............................... ATAATTAATGATGATTTCTTAAAGTGTAAACTAGATA 23275 31 100.0 37 ............................... ATAATTAATGATGATTTCTTAAAGTGTAAACTAGATA 23207 31 100.0 37 ............................... ATAATTAATGATGATTTCTTAAAGTGTAAACTAGATA 23139 31 100.0 37 ............................... ATAATTAATGATGATTTCTTAAAGTGTAAACTAGATA 23071 31 100.0 37 ............................... ATAATTAATGATGATTTCTTAAAGTGTAAACTAGATA 23003 31 100.0 36 ............................... TAATATATTCTTTTAATTTTGTTTTATAATAAACAG 22936 31 100.0 36 ............................... TTGTCGGTTGAGGTTGGTAATTTTGAGCTTGCGCAT 22869 31 100.0 36 ............................... TAATGTACCTGGCATTGTTTTGCTAATATCTGTTGG 22802 31 100.0 36 ............................... TTTGTTAGCAAAAAGGTAAAAAAATATTTCTTAATT 22735 31 100.0 37 ............................... TCAAGAACAATATTATGATCAAACTGGACAACTAAAA 22667 31 100.0 36 ............................... TTTGTCTTTGTATTGATTGTAAAGTTCATTTCTATA 22600 31 96.8 37 .............G................. ATTCGTAAAGTGGAGCAAAGGATTAGGAAAAGAATGG 22532 31 100.0 36 ............................... CATTATGTTTTCTTTGTAATATGTTTTTGCTTTATC 22465 31 100.0 37 ............................... TATGTGTCACCTCCTTTTCTTTTTCTTTTTCTTGATA 22397 31 100.0 36 ............................... TGTCTAGAAGCTTATGCCCTGCTTCTTATGAGCTGT 22330 31 100.0 36 ............................... AAACAAGTTTTGGGAGAGCCTATGGGTATCCCAATC 22263 31 100.0 37 ............................... TTTAAAATATTCTTTATAATACTCTTTATGATTTATC 22195 31 100.0 37 ............................... CCCGTCAATTAGGGCTGAAAAAAGCGAAATATGGTGG 22127 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================= ================== 207 31 100.0 36 ATAATAAATCTAACCATATTGGAATGTAAAT # Left flank : TTTGCTCGGAGAAAAAGAATATTCCCCGTTTAAAATATGGTGGTAGAAATGTATATAATTTTAATATATGATATTCAGGTAAACGATGAAGATAATCCTTATGTATTGAAAAAAGTTTTTAATATTTGCAAAAGGTATCTTAATCATATACAAAAATCGGTATTTGAAGGCGAACTTTCAGAACCTAAATACCTTAAATTAAAAGAAGAGCTCTTTGACATATTAAGAGAACATAAAGACTCATGTATAATATTTAAAAGCAGAAACGAAAAGTGGCTTGAAAAAGAGTTTTTAGTGAAAGAAGATATTGACAAAACTTCAAATTTTATATAAAATACAAGTATGTCGATGTATAATATATAATAATTTGCGGATTATCGACAGACGATTTTTTAAATTAATGTCGTATTTTGTATTGTTATATTATTTTATATCAATACTTGTATCAAATTAATATGTAGAAAATATTAGTTTTGCATATTTCAGGGAGAAAAAACGGG # Right flank : TTATCTTTTTGACCATTTTCAAATTATTTATAAAATATTTTCATTTGTAAAAATAATATTTTTTTAAAACTGCATGATAAAAATAACCTATTGCCACGATATTATAATCAATAATTTAAATCCAATCTAAAATTGAGAGGATATAAAAATTTAAAGCCATTATTTACCCCCCCCCTATGAAGTTATCAAAGAATTTGTTTCTGAAATTATCTCGCCATTTTCTAACGGGAATAAACCAAGCCAACTTATCAACTTTTTCTTTATTCATTTTAATTGAAATTCTAATTCCAAATAAAGTTAATCTCAAATACTCGCTATTATTCGATATTCCAAAAAGCGTCCACCAATTACAATTTAATCTCAATTTTTGATAATCATTATTTGAAATCGTTTCTTTATTTTTAAGCGATAATTTTCTTTCTAATCTTTTATACTCGAAAGAAACAGGCTCAAGAATGCAAGATTGTTTTATAAATGTTTCTCTATCTGAAAAATTATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAATAAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //