Array 1 45773-46350 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NMIP01000035.1 Escherichia coli strain MOD1-EC6359 MOD1-EC6359_35_length_46475_cov_22.7468, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     45773	    29	 100.0	    32	.............................	ATCTCCTCATCCTCCCAGCTACCGACAGTAGT	
     45834	    29	 100.0	    32	.............................	CAAGATCTGCCGCGAGTGGTTTCACCCGGCAG	
     45895	    29	 100.0	    32	.............................	GATATTTGGGCGTAATACCGCCCGGATAGTGT	
     45956	    29	 100.0	    32	.............................	TGGTACGGAACATGCTGTCTATATTTCGACCA	
     46017	    29	 100.0	    32	.............................	CCAGTGGAGCCGCCGCGAATTTACACACGATT	
     46078	    29	 100.0	    32	.............................	TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC	
     46139	    29	  93.1	    32	.A.C.........................	TTCTTGCGGGTGTTGCAAATATTCTTCACGTA	
     46200	    29	  93.1	    32	.A.C.........................	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC	
     46261	    29	  96.6	    32	.A...........................	GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT	
     46322	    29	  89.7	     0	.A.C........................A	|                               	
==========	======	======	======	=============================	================================	==================
        10	    29	  97.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATA

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   GAGCTCCCCGCGCCAGCGGGGATAAACCG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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