Array 1 73687-76149 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOHB010000007.1 Clostridium perfringens strain 2C22 NODE_7_length_120066_cov_98.6845, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 73687 29 100.0 36 ............................. TTTAAATCTTCATCTATAAAGTCATATGGAAACCCA 73752 29 100.0 36 ............................. TGAAAAATAAACGTCTATTAAGTTTATTACATGATA 73817 29 100.0 37 ............................. GTATCAACTACAGTATTTACTGGTAAAAAAGTATTAG 73883 29 100.0 36 ............................. GTTTTTAATCCATATGGGTATTGAACTGAATTAATC 73948 29 100.0 37 ............................. GGTCTTAATATTAACTATTTCCTCTTTAGTAAATTTA 74014 29 100.0 36 ............................. ATAGAAGCTACAATAAGAATTGAGTTAAATGGTCTT 74079 29 100.0 37 ............................. TATCAGCTATTAGATCATTTCTTCTTTCCTCTAATCC 74145 29 100.0 37 ............................. TATAACTATTTATCCTTCCTGAAAACATAAAATTCCC 74211 29 100.0 36 ............................. TTAATAGTATTAGTTGTCTTCATGGTGTTAGACCAA 74276 29 100.0 36 ............................. CATCAGATGATGGAAGGGAGTAGAGTAGGTTGGAGA 74341 29 100.0 38 ............................. TCTGGAGCAACTACAAGAGTAAAGATTACTTTTAGAAC 74408 29 100.0 36 ............................. TACTTTTTGATGGTCATTTATTGTTAATATGAACTT 74473 29 100.0 37 ............................. TTCTTTATTTAAAGGTAAGAACTTATTTATTAAGTCA 74539 29 100.0 37 ............................. GAGAAAACATAAGTTTCTTTCGCTTTTGCATGTAACT 74605 29 100.0 38 ............................. TTGATTATCAGTTAATTCGTCATTCTCTATTAACTCTT 74672 29 100.0 37 ............................. TTTTTTTCATCTAAATAATTATTGCTCCAAGGTAAAA 74738 29 100.0 38 ............................. TTCAATATAGTTTTAGCAATTTTATATAGAACAATCTA 74805 29 100.0 37 ............................. GTAGATGGAACAGATAGTAAACCATCTGATAAGCCTA 74871 29 100.0 37 ............................. ATTGAAGGGGTTAAATTCCAGATTAGAAATACTGATA 74937 29 100.0 37 ............................. AGCTTTGGAGAAAATGGGAATGTAATTCTAGCTGGAC 75003 29 100.0 36 ............................. TTTATGTTTCTGAGGTTATGGTTTATGAAGGTATAT 75068 29 100.0 36 ............................. GAAGCAGATAAAATATGGAATATAGAAGTTGGATCT 75133 29 100.0 38 ............................. AATGAAATTTCTATAACAGCCTCATTAAAAGGTTGGTA 75200 29 100.0 38 ............................. GTATTTAGGGGTAGTGATAAAACATCTAGTATTAATGT 75267 29 96.6 36 .......................T..... TTGTTGGAATAGATGCATACATGCAAAAAGTTCCTG 75332 29 96.6 38 .......................T..... TTAGAATTAAAGCCCGAACTTTGTCCTATTGAATGTGA 75399 29 96.6 36 .......................T..... GAATTATTAGTGTCTAACTTATCGCTTTTAGCGTCG 75464 29 96.6 36 .......................T..... AAGAATATGCACAACGATTAGGGGACTATTTCGCTT 75529 29 96.6 37 .......................T..... AACCAAAAGTATGGATTTTTTAATCTGTTTTTTAAAT 75595 29 96.6 36 .......................T..... TTACTTGTCTGTAGGACTTAATAAGGCGAAAGACTT 75660 29 96.6 38 .......................T..... TTGAAATATAGAAATATGGTAGAAAAATATTTATCACC 75727 29 96.6 37 .......................T..... TTGTCATTAGTATTAGAATAAGTACCATTACCATCTC 75793 29 96.6 37 .......................T..... AATAAATTTTACTATGCTTTTCTAGGTGGTAGGGGTA 75859 29 96.6 37 .......................T..... GCAGGTGCATTAGGCTATAAGTTACAAGATGTCGCAG 75925 29 96.6 36 .......................T..... TCAGAAGGAAGAATTCTTTATGTTACACCAGCTATG 75990 29 96.6 37 .......................T..... GAAATTATATCACCTGACATTGATTGAAATGCAGTTC 76056 29 100.0 36 ............................. TATGTTTGGGGTGGAGGAAGAACAGAAGCTGATGTT 76121 29 82.8 0 .......................AAGTT. | ========== ====== ====== ====== ============================= ====================================== ================== 38 29 98.5 37 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGGAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAGCTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACAAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGAAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTAAATATTTATGATAAAATTAACAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : TGAGTTTTAATTTTATCTTGTAATATACATTAATTCAATAAGTATTAAATTAAGAAGAAGTTTGCATAAAAATAAGCAAATACATTCAAAGAGATAGAATTGAAGAAGTAAAGAAATTATTAGTTTTAACGAATTATTCTTTGTCAGAGAGATATATACTTTTAAACTTTGGAGCTAAAAGTTATTTCTTAAATATTTTCCAAATGGTCACAGAACTTAATCCAAAAGAATATATAGGCTTAAATAAAAATGATACCAACATAGGTATCATTTTTTTATTTTATAAATTAACTTCACACTAGGAGAATTTTTTATTAGTTTCCTCTAAAAATAAATATTTATTCTTAAGGAAAGTTATATAAAGTGGGAACAAAAGTTGTTTCCAACCATTCATATAATTACCACAATCAAAAAATATGGTTTCATTATCTGAAGTAGAAAAATTCAATTTAGGGCTTCTACACCAATCTATTTTTAGATAAATTGTGTGATCCCCTTTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : GTTTTATATTAACTATGAGGAATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //