Array 1 67792-71544 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMZU010000010.1 Schaalia turicensis strain 1001270H_150608_E10 NODE_10_length_89721_cov_13.794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 67792 36 100.0 28 .................................... CGTTGAAAACTCTCGCTGTTGACCCGTT 67856 36 100.0 28 .................................... CCCTCGGTGGCGTCTCCCTCTCCACCTA 67920 36 100.0 29 .................................... GAGGAAGTGGTGGATGTAGCCCTTGAAAT 67985 36 100.0 28 .................................... TGCCCTTGGGCATTCCGCCGGGGGTGAC 68049 36 100.0 28 .................................... TCCATCATCGACCCTGTAACGCGCGTGG 68113 36 100.0 28 .................................... TCGTAAATATACTGATGCTCGGGTAAAA 68177 36 100.0 28 .................................... TTGATGAGGCGTGGGCGTTCGACAGCGC 68241 36 100.0 28 .................................... GTTTTTGTTACACTCATTCCATGGGTGA 68305 36 100.0 28 .................................... TTTCAAGACCAATATCGCCAGCGCCTTT 68369 36 100.0 28 .................................... CGATGGCGAAACACTCACATACGACAAA 68433 36 100.0 28 .................................... CAAGTCCAGTTCACGCACTCCTTTTCAA 68497 36 100.0 29 .................................... GCGAAATCCAATGGTTCGCCAACTCTTGA 68562 36 100.0 28 .................................... TTGGGCGATACCTCAACGGCAAAAGGGA 68626 36 100.0 28 .................................... CATACACTTTGGTCATCACGCGACACCC 68690 36 100.0 28 .................................... ATTTCTACGTTCGCGTGTATGAGTCTTT 68754 36 100.0 28 .................................... ATGGTCTTGGTAACTCGCAAACAGTTGT 68818 36 100.0 28 .................................... TGGCATTACGAACACGGATCGCCCGAGC 68882 36 100.0 28 .................................... GACGCTCTTCAGTTCGTCGGCTCGTCCT 68946 36 100.0 28 .................................... CGGGCGTATGTGTCGATTTCCCAGTAGG 69010 36 100.0 28 .................................... GTCGTTGGATTTGACTGTCGAAGCGGAG 69074 36 100.0 28 .................................... GCGTCACGCTTATTACCATCGGCTTGTG 69138 36 100.0 28 .................................... GTAACGAACGCCTTACACATGGGCAGCA 69202 36 100.0 28 .................................... GTACTGAGCTGAGGAAGTACGCGCATGA 69266 36 100.0 28 .................................... GTAAAAGCGCAATCCTCAGCGTAAAGAT 69330 36 100.0 28 .................................... TCGGTTGAACAAGTATGCGACGACTGGA 69394 36 100.0 28 .................................... TTCAGAAAACGCGCCCCCAAAGCGCTCA 69458 36 100.0 28 .................................... ACGGCGACTGCTTGGAGGTCTTGGCGAC 69522 36 100.0 28 .................................... TGCACATAGTCACGTCGCGACTGGAAGG 69586 36 100.0 28 .................................... CAATCTCGTCCGTGAACTGCTTCGAGAC 69650 36 100.0 29 .................................... TACGGCTCAAGCCAGTCTTATCCTCAGCC 69715 36 100.0 28 .................................... CGTTCGATGTGCACCAACTCGTGTGTGA 69779 36 100.0 30 .................................... CGCTGGGCGTGGATGAGAACCAGTTCGCCG 69845 36 100.0 28 .................................... CCATGCGGTATTCATTGCCCATCGTCTC 69909 36 100.0 28 .................................... TTGACGCTCAGGGCGGGGATGGTGACCT 69973 36 100.0 28 .................................... CGGTCTTAAACCACCGTGTGGCAGGCGA 70037 36 100.0 28 .................................... CGCCTGCCCAGATGTCCCACCGGTGAGG 70101 36 100.0 28 .................................... CTATTAAGAGCTTTCTGGGCATTCACTC 70165 36 100.0 28 .................................... AGTCCGTGGCTCTGCCCGGTGTGTTCGG 70229 36 100.0 28 .................................... CAGTCTATGAGCGGTTTCAGGTTGAGTT 70293 36 100.0 28 .................................... GGAGTTCGACAACGTTGTCGGGCTTGGA 70357 36 100.0 28 .................................... TCCATCGAGGACGTTGTAGATGCTCTGG 70421 36 100.0 28 .................................... TTGTTAATGCACTGGGTTCCGCGTTGGT 70485 36 100.0 28 .................................... CAAGCACGCCGGGCACATCATCGCTGAG 70549 36 100.0 28 .................................... CCGCCGGCGCTCAGCCGGTATTTAACAT 70613 36 100.0 28 .................................... AAATCTAGAACACTGGCATAATTGGCGG 70677 36 100.0 28 .................................... GTGTCTGGTATTGCGCATACTGCTTTGG 70741 36 100.0 28 .................................... TGTTTTTTAATGTGGCGTTCGCATGATT 70805 36 100.0 28 .................................... TCCTTGTCGAATAGGACAGTCGGTTTGT 70869 36 100.0 28 .................................... CGAAGCTTGCGAGCATGGGCGCAGACCT 70933 36 100.0 28 .................................... CGTTCCCGGCGCAGAGTGTCGGCGACGT 70997 36 100.0 28 .................................... CTGTCGAGCAACTTCTGCGCGCAATTCT 71061 36 100.0 28 .................................... TAATATGGTAGGTATGTCAATTTTAGGG 71125 36 100.0 28 .................................... ACCGTGATTATCGGGCAGAGGGCGGACG 71189 36 100.0 28 .................................... TATTAGGGTAGGTATGTCAATTTTAGGG 71253 36 100.0 28 .................................... TCAGTCTCCGCGTCCCGCGCGTGCTTGA 71317 36 100.0 28 .................................... GCACGGATAATGCGTCCTTCACGCTGGG 71381 36 100.0 28 .................................... CACGCTCCCAACTTTGGAGGGAATGGCG 71445 36 100.0 28 .................................... CCTCACAGCTCACCCTCGACGCATGGCG 71509 36 91.7 0 .................................CAA | ========== ====== ====== ====== ==================================== ============================== ================== 59 36 99.9 28 AAAGAATATCAAGAGTTCTGGTAACTGATTCCCAGC # Left flank : GATGATGGAAGTGTTCCACGTGTCTTATTAGATCTCGCTCAACAGTATGGGCGTTATGTCGAAGGAGATATTGAAAAACTCCCGGTTCCTTCCTGGCAGGGGCCATCAGCATTGAACACGGATCTCAAGAATGCCTGATTCTCCGATGTGGTGTGTTGCGATGTTCGATTTGCCTGTTTTAACGGCTCCACAGCGTCGTGAGGCAACACGTTTTCGAAAATTCTTGCTTGATCGTGGTTTTTCGATGGTTCAGTTCAGTGTGTACGTAAAGTACTGGCCGACTGGCGGAATCGACATGACGACGATCAAAGCGATTAAAGGATCCTTGCCAACAGGAGGGAAGGTTCGCGTGCTTGCCGTGACCGATCGCCAGTGGTCGTCTGCTTACTGTTTTGAGAACGCACGTGAGCAAGTAGCAGATGAGGCGCCAGAACAATTGATGATTTTCTGACGCCTCAAAGGCACTTTCCCGCGCTATTCTGCGGAAAACCAGAGTCTCT # Right flank : AATAATAATTTCAGTTCAGAAAAACACCATGAGAGCTGGAAGCACAATTCAATGCAATACACCTTGGGGGCAGGTCGCATTTGCGCCCTACCCCCAAGGTCTGTGCGAGACCTCGTCGATTGTGACGAAGCCCGACAGTCGGAAGGTGGAACTAACGCACCGACGTGTGGCGCTCGATCGAACGCACACTCCACCATGCGACACCGATTGCCAGCAGGACCATCCCTACGGGCGCACCAATGCCGACAAACTGCGGATCCGTATCAGTCAACAGCGCATTCACTAGGTCCGTGACCCAAAAGCCGAAACGTAATTCGCCCGTGTTGATATCCCTCATCAGTGGGAAGAACGCCATCGCAGCAAAGGTCACCACCTGATTCGCCAGATAGAGGATCACGAAACCCACTACCGCAGCTCCAAAGCCATGCTTCTGCCAACGCTCGCGAGCACTCAAGCTCATTACACCAGCGACCTCAAGAACAATCGTCACCAACTGCACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAAGAATATCAAGAGTTCTGGTAACTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //