Array 1 114030-111185 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFKM01000005.1 Legionella pneumophila strain C5 NODE_5_length_183333_cov_65.5983, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 114029 32 100.0 35 ................................ TTAAGTCTATAGGTTGGCTAGGTTTCATCTTTCCG 113962 32 100.0 35 ................................ CATCTCGCGGTGATAGGCTTTAACCCAGTCCGGGT 113895 32 100.0 35 ................................ TTTAAATCGTTTTTAATCACCTGATCATCTGTTTC 113828 32 100.0 33 ................................ AATTAAACTGGTTTCTATGTCAAAAAACAACAG 113763 32 100.0 35 ................................ ACTTTTAACGGCACAGCCGTAACCGGGATCACAGG 113696 32 100.0 36 ................................ AATGCTTTCATGGTGAACGTTGCTCTTGGCAAAGGT 113628 32 100.0 36 ................................ CCATGTGCCATTGCTATTAATGTAATCAACGATGCT 113560 32 100.0 34 ................................ ATCGCAATGATGTTGGCAGCAGTTAAAGGGACAG 113494 32 100.0 35 ................................ ATGTTCTTGTCAAACCACATTGCTATAGCACTTAC 113427 32 100.0 36 ................................ AGCGTACTCCATGAAATTCGTATAGAACCAATGCAT 113359 32 100.0 33 ................................ ATAATAATCTCACAACGTAAACCAAACTTTACT 113294 32 100.0 35 ................................ TAGTTTATCAGTAACGTCTATTCTTAGTGTATGGT 113227 32 100.0 34 ................................ CGGATACTTGGTATCACTTACTGCTATAAAATGG 113161 32 100.0 36 ................................ TAATACATTAATAATCTTGGCAGGGGCTTTTAGCGA 113093 32 100.0 34 ................................ TTCTTAATTCGATTGCCCATTTTTCGTGTTTAGT 113027 32 100.0 35 ................................ AATTATAAATCTAGCTTTGGATAAGGCCAAGTCGA 112960 32 100.0 35 ................................ AATGCCACAGTAAGGGCAACATGTACGCATATAGA 112893 32 100.0 34 ................................ ATGGCAATGATGTTGGCAGCAGTTAAAGGGACAG 112827 32 100.0 37 ................................ CGATTGCAGCAAGCGGTTACTTCAATGCTTTCATGGT 112758 32 100.0 34 ................................ TCAAGAAAATAGTAAATGTGATTTATATTGTAGT 112692 32 100.0 36 ................................ TTGTTTTAGGAAGTTTGAAAGGATTGTTTACAGGTG 112624 32 100.0 35 ................................ GAAACTGGATTGTTATTTAAAGCCCGTCCTGATGC 112557 32 100.0 35 ................................ CTTTGTATGGCTGATCAACATGTTTCGCTGTCGTT 112490 32 100.0 34 ................................ TTCGTAAATCTCAGGTACATTTATGTCATAGGGG 112424 32 100.0 36 ................................ AATTACAATTAGTTAGGGATAGGACTAGATTTATTG 112356 32 100.0 34 ................................ TTTATGGCCCGCCCAAGGTGTGGCTATAGGTCCT 112290 32 100.0 35 ................................ TAGTTTATCAGTAACGTCTATTCTTAGTGTATGGT 112223 32 100.0 34 ................................ TCACACCACTCACCACTATTTATATATGATTTAC 112157 32 100.0 35 ................................ ATGGCCTAGTTGGATCAGGGAATTGCTAATAATTT 112090 32 100.0 36 ................................ TTGTGTCTCTATGTGAATTAAGAATAGTTGTCTTAG 112022 32 100.0 37 ................................ GGAAAATGATGATGAAATAGCTCTTGTGATAGGGCAT 111953 32 100.0 35 ................................ ATTTTATAGGCTCAGAAAATAATGATTGGGTTGTT 111886 32 100.0 35 ................................ AAGCAAAAACAAGGGTTACAAAAAGAAGCCTTGGA 111819 32 100.0 35 ................................ ATCTAAAGAGAGGTAAAGTAATGACTATTGAAGAA 111752 32 100.0 36 ................................ TTATCTAAAGCAATAAACTCTTGACGCAATGCTGTC 111684 32 100.0 34 ................................ ATATTTCGCAAACTTATAGAATGAATGTAAAAAT 111618 32 100.0 34 ................................ CGTCGTCTAAGACATTAAAAACTAGAGTTTTCAT 111552 32 100.0 34 ................................ AGATAACTTAGATTTTACGCGTTTGTATTTAACT 111486 32 100.0 37 ................................ ATAGGTATAGAAAAAGAAGAAAAATATTTCAATATAG 111417 32 100.0 34 ................................ ATCCCAAGGTAAAATAGCTTGCACATCATCATTC 111351 32 100.0 36 ................................ TTTGAGTTTGGTGATTAGGTCGTCAATGCCAATAGG 111283 32 100.0 35 ................................ AGGAATAGCAATTGTGTCAAATAGAAAAGTAGACG 111216 32 90.6 0 ...................T.C........T. | ========== ====== ====== ====== ================================ ===================================== ================== 43 32 99.8 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : AATTTTATACTCCTTATTTAGTGAAGTAATTATGTTTGTAGTAATAACTTATGATGTTAATGTAACAACTTCTGGTGGGCAGAAACGTTTACGGAATATTGCAAAAACATGTCTTGATTATGGTTTTAGAGTGCAAAACTCTGTATTTGAATGCGAAGTTGAACCTGATCGGTTCGTTGCGTTAAAAAATACACTTTTAGAGTTATTTGATCCTGATGCTGATAGCTTACGATTTTATTTTTTAGGCAAAAAAGGGAAGGATAAAATCGAACATTTTGGAGCTAATAAGGTCATCGACCCCTTGAGAGATCCACTGATACTGTAATTCGCTAACTTGAAGTTCTCATATTTTTACCGGTCAATTATCGGATTATAACCACTTGATATTTATATTTTTTTTTATGTGTGCTTATCAAGCTAATCAATAAATATAATTTTTTATTATTATTAGCGATATTTAGCATTTTTTTCGATATATTTCAATATGCTATAATCATACT # Right flank : ACGGGTAGCATGAGTTTTTTAAGTGAACAAAAGCGTCGCGTTTAGCAAAGATAGTATGAATAAATTTTAATTAAAATGAACTTGATGTGAATTGTTACAAACATTTCATATCGATTTTAGGTATATTTAGCCAGAAGCTCTTTGTCTTTATCTTTGACTTTGATATCTTAAAGAAGAAGTTCCAGATTTTTTACAAGGATGTGAATATGTCTGACTTACAACAATTGCCTAAGACTATCCTGAGATTTTCCTGGCATTTTATAAAAAAAAGTCCCTGGCTTTATGCTTTATTTTTCATAGCACCAGTGGTGATGGTGCTTGAAACGAATGTGATTCCCTATGCTTTAAAAATGATTATTGATGGGATAACAAACCATAAAGGGGGAAAAGAAAGCATATTTCAAGACATCGCACCGGCTTTGTATTTGGGTGGAGTTGCCTGGTTTGGTGTGATTCTGGTGTTGCGCTTGCATAATTGGTGGCAAGCCTACCTTGTTCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //