Array 1 44552-45640 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMFL01000060.1 Staphylococcus agnetis strain 1387 Contig60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44552 36 100.0 30 .................................... TTTTTGCTGCGATTAGCGTTGACACGTTCT 44618 36 100.0 30 .................................... CGGATTGTCGCCGAACACAAGTTGTTGTTT 44684 36 100.0 30 .................................... ACCGCTCCGTGTGGCTAAGCACACATGGTC 44750 36 100.0 30 .................................... CTTTTTTTGCTTTTAATTGCGCAGGTGCGC 44816 36 100.0 30 .................................... TATTTTAAAGCTTTCTTTTGATATACTTCG 44882 36 100.0 30 .................................... CCCGCCCGGTTCAGGTAAATCACTAGGAGT 44948 36 100.0 29 .................................... CAAATGATTCAATATTATAAAGAATCAAA 45013 36 100.0 30 .................................... ATATTCTTGTTTAAAGGGTTGGATAATCCA 45079 36 100.0 30 .................................... GCTTAGACATTACGCGTAAGTGGACGACGG 45145 36 100.0 30 .................................... ATCCACCGACAATGATGTCGCATTTCCCTC 45211 36 100.0 30 .................................... TAACGATGACCGCACTATGACACTGATTTA 45277 36 100.0 30 .................................... GGACAATAAACCTGAGCCACTAACAGCACT 45343 36 100.0 29 .................................... TAGAATTGCACGTTTGGAAGAGAATGATG 45408 36 100.0 30 .................................... CAATTATGACCAATTATCGAAAGAAACGGG 45474 36 100.0 30 .................................... ACTCTTCAGTGTCAAGGTAACGATAGAATA 45540 36 100.0 29 .................................... CCAAAAGAATCGGCGTTGTGGCGCAGAAA 45605 36 77.8 0 T........................G.TTT.AT..A | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 98.7 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Left flank : GACGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTGGTCAAAATCAACGTGAATGTCTGATTTTGCCATACCTGGAAGTTCAGCGCTTACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATTGCATTAAACCTTGCCCAAAATCTTTAAAAAGATCACTGGGATTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAAATGGTAAAGATCACATCTAATCCTTTACAATCTTATTATACGACAAAGGTCAAAAATAGTCAAGGTCAAAGTATTGTGGTGGATGTAAATTAAAATTTATCCAAAATACGTAAAGATCAGTGATATCAATGGATTAGACAAACTTAAAAGTTATAGTATACTGTAGCTAGAG # Right flank : ATGTGCTATTTATGAAATATCTATATAAGCGATCCATTTATTTTAGCGATAACCTCATAAAATTGTTTAACTCAATGAAATAAATGTTATTTAGGTGGAAGTTATAACACTCACTCTATAAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGTATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTGCCTCAGTGGGATACGGTATTGTAGATAGTGATACGCGTGAAATTAAAGATGCTGGGGTACGATTGTTTCCAGAAGCGAATGTAGATAATAATGAAGGAAGACGTAGTAAAAGGGGAGCGCGACGTTTAAAAAGAAGACGAATTCATAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //