Array 1 29300-31450 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWIN010000006.1 Citrobacter portucalensis strain XM10F302-7 NODE_6_length_267423_cov_106.188909, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================ ================== 29300 29 100.0 32 ............................. CGCACCTTTAGCATACTCATTACGCAACACCT 29361 29 100.0 32 ............................. GAACGATGTAACCGATATCGCCGATGACGTGT 29422 29 100.0 32 ............................. CGACTTACATTCGCTGAAATATGCGCCGCAAT 29483 29 100.0 32 ............................. CCGCGTTTACGCCGCGCTGGAGCGCCTGGGAC 29544 29 100.0 32 ............................. ACTGGCAATTCATCACCGGTGCCGATTTCGCC 29605 29 100.0 32 ............................. TTTTACGCCGAGCGAACGCTGAGGTTTACTCG 29666 29 100.0 32 ............................. GTGGATACCCATCACGCGGGTGAGGGAAGAAG 29727 29 100.0 32 ............................. AATATGATAACGGTTCTCATGTTCTTACCGCT 29788 29 100.0 32 ............................. ATCACGGACGTGATCGCCCTGTTTTTAATATG 29849 29 100.0 32 ............................. CCAACATCTGTTAGGCACTGCTGCTGATATTG 29910 29 100.0 32 ............................. GGGGAGTGATGGAAACGCTCATGATCATTCAG 29971 29 100.0 32 ............................. CGCTCCTCGGCATCTTCCAGCGCCTGCCCGGT 30032 29 100.0 32 ............................. TGGATGGGCTGGAGTCCGGCCTATGCGAAGAA 30093 29 100.0 32 ............................. ATTTTACGTCCGCGATGCAGGGGCTGGAAAAC 30154 29 100.0 32 ............................. CGCAGGAGTCAGCTGTTAACGCTCTGGGGAGA 30215 29 100.0 32 ............................. GCGCTCAGCGTTGTAGGGGTAGCGTTACCAGA 30276 29 100.0 80 ............................. TTAGGGAGAGAACTAGGGTACTCACAGACTAGGTGTTCCGATAAACCGTTTTATGCGGCCGTTTAAACAGGCTTCATGGC 30385 29 100.0 32 ............................. CGCGCCAACCAGGACAGTTTCTGGCGCTCAAA 30446 29 100.0 32 ............................. TAATCGCAGACGTCGAGATCAACGGCAAGCAG 30507 29 96.6 32 .....G....................... GGCATGGCTTCATTTTTACTGCTTAGTTAATT 30568 29 100.0 32 ............................. CACAGAGAGGGATATAACTATTTCGCGCTACA 30629 29 100.0 32 ............................. CAACGCGCAGATGTTCGAAATCGACACATCAG 30690 29 100.0 32 ............................. CATCGTACTGATGTTTTTATTGATGTTGCGCG 30751 29 100.0 32 ............................. GCTATCCGCACTGCACCCGAGAGCTGAAAGAA 30812 29 100.0 32 ............................. TTACCTCCGAGGGCTTTCACTATATCGGTGGC 30873 29 100.0 32 ............................. AGACGGAGCGCCTGATAGAGCAGTCAATGTCA 30934 29 100.0 32 ............................. AAACACCCGGACACGCTCGACACTGTTGTGAA 30995 29 100.0 32 ............................. CGCGGCTGCTTCTTCCAGATCATCACTTGAAA 31056 29 100.0 32 ............................. CCCGCCCACATAGGGAGGCGGTAACAGCTCAA 31117 29 100.0 32 ............................. CGTCCGTGAATATTTACGGGCGCATATTCGAA 31178 29 100.0 32 ............................. CGGGTGAAAATAAACCGCGTGCTGGAGGCGAT 31239 29 100.0 32 ............................. CCAGTGCGGCCAGTAGAATTGGGTTGCGTGGT 31300 29 100.0 32 ............................. GATACGCCTGAATTCGACGTTATCTCGCCTAC 31361 29 96.6 32 ...........A................. AATTTATCCGGGACTACAACATATCTCTTTAT 31422 29 89.7 0 ..........................GTC | ========== ====== ====== ====== ============================= ================================================================================ ================== 35 29 99.5 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATCGAAGATGTTCTCGCAGCAGGTGAAATCCAACCGCCGTTACCTCCTGAAGATTCACAGCCCATCGCAATCCCACTTCCTGTTTCTGTGGGGGATTCTGGCCATCGGATTAACTAACGATGAGTGTGCTAGTTGTTGTTACAGAAAACGTACCACCTCGCTTGCGAGGCCGACTTGCCGTCTGGTTGCTGGAAATTCGAGCTGGTGTATACGTTGGTAATGTTTCAACGAAGATCCGCGAGATGATATGGCAACAGGTCTCCGTTCTGGCAGAAGAAGGGAACGTTGTCATGGCGTGGGCAACGAATACGGAGTCGGGCTTTGAATTTCAGACGTGGGGTGAAAACCGACGTATTCCGGTGGATCTCGATGGATTACGATTAGTGTCGTTTCTGCCTGTTTTAAATCAATGAGTTAGCGATCTTTAAAAATACGGAAAAGTTGGTGGATTTCTTGTATGCCAAAAAAGGCTTAAAATTCAGTTGGGTAGTTTTAGA # Right flank : CATTTTAGCGTTACGTATTGAGCCGATGATGTCGTATTCCCTACTGGCATAGAGACGAAAATGATAGCCCAACGTCTTCATCTAAAAAGGTGCTAAGAGTTTTTACCCGCTTTTGCCAGTTCTTTTACCAGCGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCGGCCCGGTAACGCTTTATCGATATGCTGTTGGTTATCCAGTCGTACGTCGTGCCAGCTGTTGCCTGCCGGGAAAGAGGCGCTTTTGGCGCGCTGCTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACTGAAAGAACGGCAATCCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGGCTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //