Array 1 22936-24214 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOYZ01000014.1 [Clostridium] populeti strain 743A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 22936 30 100.0 36 .............................. CCATCTGTCCATAGATTTTCTTCCACAAACATCTGA 23002 30 100.0 35 .............................. TCAATAGTGGATTCTTCTCCATTCCACAAACATCC 23067 30 100.0 36 .............................. TCGCTATTTTTGGTGCTTTGATACGCAAGGGAGGTT 23133 30 100.0 36 .............................. ATTTCTTGCATTCTATTCCTCCTCCACAAAGTTTTC 23199 30 100.0 36 .............................. TCACATCTGATTGAATTTTCTCAAGTTCTGATGTTT 23265 30 100.0 36 .............................. TACCTCCAATTCTTTCTTTAGGTAGTATTGGTGTAG 23331 30 100.0 37 .............................. CACTCACTCCAAAAAGATATGGTGGAAAAACACTTGC 23398 30 100.0 35 .............................. GACTGTAATATATCCTTTTTGTCTGTATTCATCAT 23463 30 100.0 35 .............................. TCCCTTCTTTTCCGTATGATGGTACGCCATACACC 23528 30 100.0 37 .............................. AAGAAAGAGCGCGAGAAGCGAAAAGAATTGCAAGAAC 23595 30 100.0 36 .............................. TTGGAAATGGCCCATATTCAATACCTTCTTGTGTGC 23661 30 100.0 35 .............................. TAGAATGAAATGTTTTCAATGTCAACAAAAATATA 23726 30 100.0 37 .............................. GAAAATTCAGGACTGGAGCCAAGAGAGATGCGACTCA 23793 30 100.0 36 .............................. TCAAAGAAAGGTATCCCATGCATGTGGGAATGTGGT 23859 30 100.0 35 .............................. TACATGTACTGGTTTCACTCATTTTGTACATGAGC 23924 30 100.0 34 .............................. CCGATCTCTTTTCCTGTTTTGAAATCTTTCTCAG 23988 30 100.0 35 .............................. TCAAAAACAGATTGTTTTGAGTTATCGGGCAATTC 24053 30 100.0 37 .............................. TTTGTCTGCCAGTTGCCATGTTGTATCCATTGCTTAC 24120 30 100.0 35 .............................. CAATATGGGTACATATCGTTTAGGGTTTACTACTG 24185 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 20 30 100.0 36 GTTTTAGAGATACCTATGAGGAATTGAAAC # Left flank : TCTCTTTGGAAGGTGGAGCAGCAGATTCCGTATGAAAAAATGGAGGTAGAATTTTTTTTGAATGCGGATAAGGAGCATTATTTTTTTGGTTATGTGAAAGGCTATGAAAGAATTGTATTAGGGAGTGGGGAAACGGCTTATCTAACTACTGAGACAGGAGGCAAGTTTACTGGAAATTATATTGGATTGTATGCAACAGGAAATGGAAGGGCATGTTGTAATAAGGCAGTTTTTAAGTGGTTTGAATATGTTGGGAAATAGAGCTTGATAAATTACGATTTATGTAAATGAAAGTTCTATTATGCTGGTATATGATTAGTTGATTTTGATGGAAAAATAGCTTATATGAATACAAGGTTTTGAGGTCGACCTCCAATAGGGTAAAAAGTACGGAGGGTCGACCTTTTTGCCTTTGCTGTTTTCCGGGCATCAGCAAATGTTTTTGTAAAGTTAGGGATTTACATGTCATGGAGGATGTGATAAAATTAGGGATGAAATGG # Right flank : CTTCAAAAAGATTTATTCCTTCAAAAATCTTCTGGATTATAGAAACACAGATAAATAATCAGCACTTGACAAACATTTGTTCGATTGGTATAATTTAGTAAATGTTTTAAGATTATTTCTATGCGTGTAAAACATGCCAATAATAAAAGCATGTGTAAAATAAAGCGCGGCAATTTCCAGATGGTTTATGCTAGAAGTATGAGATAATAATAATTAATAAACAGTGATAGGAGAGAACGCCAAATGAAATGAAACTGATTCATTTTATTTGGCTTTTTTTGTGCTATTAAGATTATTAAATGGAATTTTTAGAAAGTATTTGTCCTTTTGTAGGAAAACAAGAAATAATTTCAATTATTAAAATAATGACAAAAAAACAACATATTTGTTAATATGGGTAGTATAATAGGTAAAATAATCATTAAATGTAAAAAAAGTATTGATCTTTTCAAGAATATGGATTATAATAGCAATGAGGTGATGAAAATGAGTATTAAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 1026-1187 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOYZ01000044.1 [Clostridium] populeti strain 743A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1026 30 100.0 36 .............................. TACGTCGTTTTAATGCAGGTCTCCACCCAGTAACAT 1092 30 100.0 36 .............................. TCGAATTGTACAAAATCATTATTACCCCATTCTCTC 1158 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 98.9 36 GTTGAACCGTAACATGAGATGTATTGAAAC # Left flank : TTTATCCTTGCTATTTTAACAGTATTTACTATTAAGTTCAATAATTTTATTGTAATTATATGAATAATTTTGTATGAAAAATAAAGTTGTACAAATGTAATGAAACTAGGATAAAATTAAATTGTTTGCAATCAAAAGTTGAATATGCAGTTATTTTTACGAGATTGCTGTAAAATGCAGTTGCAATGTTATTGACTCAACGTATATGGGGTAAGATAAAAGCATACCAAAGAGAATCAATAGCTAACAACGAAAGATAAGGATACACAACCATTGGGTAATTGATTGGGCGTGTTTTTTAGTTATTGGCTGTTCTGACTGAAAAAGTCCAACTAATTTTTTTGTCGAAAACTTGCAAAGTCTTGAAAATAGAGGGCTTACAGGATGAATTTGCCTATAATACAGATTAATTGAATTTGGTTGGACAAAAATGCAGGAAAGGCTTGCAAAATCTGAATTTTATGGTATTATAGAAGGAGAAAAATGGGATATTTACGTTA # Right flank : GATATTGTCAATATCTCTTTACACTTTTTTCACAAGGATGTTCGACCTATGCCGCATCCTGTAAGGAGGCATAGTATTGTTGCCTCTTAAT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCGTAACATGAGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //