Array 1 4314-3433 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000192.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf192, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4313 30 100.0 35 .............................. GCATTAGCACAACATTTTGAAGAATCGGAAAATTC 4248 30 100.0 35 .............................. TTGAATTCTATTATTGCAGCATTTAACTCGATAAT 4183 30 100.0 35 .............................. TTTATCGGGTCTTCCCAAGGCATATAGACCCTGGG 4118 30 100.0 36 .............................. TTCTAAGGCGTTTAAGCGTTCTTCGTAGTTGATTGA 4052 30 100.0 35 .............................. GTTCAAAACATTAATGTTAGTAGGACATTTTGTTG 3987 30 100.0 35 .............................. TCGGAAGTCTATGACCGAAAGCAAGTTCGTTTTTA 3922 30 100.0 35 .............................. ATTAATCATATCTAAACTCCTAGTTCTACACCTTC 3857 30 100.0 37 .............................. GTGGCAAACAGAGACTTGTGGAAACAACTGAAAGAAA 3790 30 100.0 34 .............................. AAAGCGGATTATATGAATTGGTGACAGAAATCTG 3726 30 100.0 36 .............................. TCTCTTGTTCATCCAATACTGTAAATAGTTTATTTG 3660 30 100.0 36 .............................. GAGTTCTACCAAAATTCTTTGTTCTGCAGAACCAAA 3594 30 100.0 37 .............................. GGAGGTCGCGCATTAGGCTCGTAGGCTTGCAGGAAAT 3527 30 100.0 35 .............................. ATCTCCGGGTATGGCATATGCTGGAATACAAAATC 3462 30 90.0 0 ................AT.........G.. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 99.3 36 GAATTAATAGAAACATTGTGGAATGTAAAT # Left flank : ATGATAATTACGAATTAATAGAAACAT # Right flank : TATTATTATAATTAATATTTAGCAGATGGGATATATCAAAAAGAAAATATGACAATGATTTTAAACGGGACATGAAATTGCTAACAGTGATATTTTAAGTGAGGTGCTGAAAGGTGATAGAGTATGAGAATTATGGAAAATTAGAGAGTCTTGCAGAATTAGAAAATGCCATAGAGATGGGATTAGATATTGAGTTTCTTCTATATGATACGAGGTATAATATTTCTTGGAGAGATAACAAACCATTTATATGCGAATGTCCAGAAGGAGTGGCTAAGTTTTTGATACCTCAGAACTTTTGTTACAGAGGTATGAAGTGGGTGACAATCCTCTGAAATCTCTATGGGGAGATATGAAAATATTATCTATGTGATTAACATGTTTGGTAAATGGAAGGCGGACGTGTTAATTTTATACCTATTTTAAGGAGAAATTTTATAGAAATACTCTGGAATACATTTGCACAAACTCCTCGCATAATTTAAAATAGGAAACAATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 69543-69966 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000003.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 69543 31 100.0 36 ............................... TGCTTTTTGTGACTCACTTTGTGCCACTCCGGCAAC 69610 31 96.8 35 ..............................G AAGAAATGACAAATAAAATTGACCTGCACAGCCTA 69676 31 100.0 34 ............................... AGGTAAAAACGACATGATTTCCTGCCTGCTGTGC 69741 31 100.0 36 ............................... TTCTTTTTCTGTGCGGCCTTTCCGGCCGTATGCTTT 69808 31 100.0 35 ............................... TTATTGTGACGGTTCTTTTTTTAATCACTCCCATC 69874 31 96.8 34 ..............................A TCGAGGAGATTTGTCAGATTCTAGTTCTTTCTTT 69939 28 90.3 0 ............................--- | ========== ====== ====== ====== =============================== ==================================== ================== 7 31 97.7 35 ATTAAAATAGAGACATATTGGAATGTAAATT # Left flank : GAAGGAAGATGCGCTGAAGAATTTGAAACAAGAGGATTAATTGCTCTCTAGATTTTAAAAAAACAGACGGAAATAAAAAATAGATATATAGTATCTGTTCCATATCACTGCACGAATAATGCTTACCCGCATTATTCGCTTGCTCCAAAGTCACAGATACTATATATCTATTTTTTTATTTCCTGTCTTTGATAAATTGGAGAGGTTATTCAAATTTTAGGTTACTACTTATACTTTTAAACGCCTGTCCTTGGCTACTTCTCTCCTTCTATGCTTAACAAGAAATCTATTACTCCGTTCCTACTATTTTTAAACTGTCGCCCTCCGATAATGTAAAAATGCCCGTACATCGACAGAATTCTACAAACATGAAAAATAGGTGATTTTGTTTCTCTTTCGTAGAATTAATGAAGGAGATATGGTAAAATATTTGTAAACTTTGGCTGGTCAACAGAAAGCGGGGAAATAAGTTAGAAAAGAAGAGGGAATTCGGGCGATGG # Right flank : | # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATAGAGACATATTGGAATGTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 32-1771 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000275.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf275, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 32 30 100.0 37 .............................. ATGAAGAGATTTTAACAACAGAAGTAAAAACAGTTCA 99 30 100.0 34 .............................. ATATAGTTGTTGTACCTTGCGAAGATGCTATGTC 163 30 100.0 36 .............................. GGAATGACAGGATTTTAGCTTCTGGTGTACTTGTGC 229 30 100.0 35 .............................. GTTCCGTTTTTACTTTTCAATTTGATTAATGATTT 294 30 100.0 35 .............................. CGCATCTGCGTGAGAAACTCTTTTCTAGCGGTATA 359 30 100.0 34 .............................. CCTTGATGCGTGTAAAGTGCCATGGAGGGCTATC 423 30 100.0 35 .............................. GTGCATTCCACTAAAAATGTGGCTCGGTCAAGGCT 488 30 100.0 36 .............................. CGCCGTTGTTCTGAACCTCCGTACTCACAAGTACGC 554 30 100.0 34 .............................. CTAAAATCATGTTAATCTGTTTTGCATCTACTGC 618 30 100.0 35 .............................. CTTGCGGCCACAATTCCTGCTACCACACCAACGAC 683 30 100.0 37 .............................. CGTGAGATAAATTACTGCCATTTATCGGGTCTTTCCA 750 30 100.0 37 .............................. GCACAGCAGAAAGCACTTGGGGACTCTTCCGAAAACA 817 30 100.0 35 .............................. TTTTTTGCTCCTGCGTGCTTACTCGCACATATAAA 882 30 100.0 37 .............................. TAACGTGCCCCGACAGGGCTAAAATATAAGCCCCTTC 949 30 100.0 37 .............................. TTGCACTCTCTGACTGTGGCTTATCACGCCACTGTTC 1016 30 100.0 36 .............................. GAACAACAAGGAATATATTGGCGGAAAAGTGCCGGT 1082 30 100.0 37 .............................. GCTGCCTGAACTGTTGAAACTGCTGTATCATCTGCAT 1149 30 100.0 36 .............................. TTGTTTTGTGAGCTCTTCTATTTTTTTGTTTAATTC 1215 30 100.0 36 .............................. CTGCACATCGCCAGAGTGTTCGCCGGTTTCGCCTGT 1281 30 100.0 38 .............................. CCACTTGCTGCCAGGTGCATAAAAGCCATATAATTCCC 1349 30 100.0 35 .............................. CCTTTCCGCCGGAAACACTCAGGTGCGGTAAGTTT 1414 30 100.0 37 .............................. GAACTACAGAAACTATTCCGGAAGTATCAAGTTTAAG 1481 30 100.0 36 .............................. TGAGGCGGCGCCTGCTGTTGTTTTAATCGGTTGAGC 1547 30 100.0 36 .............................. TGTGTGAACGTCCTCTTTTTTGTACATGATGTCGGT 1613 30 100.0 36 .............................. CCACTACCACCGAAACCATCACTTGCGTTTGCGTTT 1679 30 100.0 33 .............................. TTATTTCACAACACATTTCATCATCTATATATG 1742 30 93.3 0 TA............................ | ========== ====== ====== ====== ============================== ====================================== ================== 27 30 99.8 36 ATTTACATTCCATAATGTATCTATTAATTC # Left flank : ATTTTGGTTTATAAAGACCCGAAACAGGTGAA # Right flank : CCGTCCTCCAACTACCATTATATCATCTATAGTCTTTCTTCTTTTTCTGTCGACCTCTTTCTATTCTCCTCATCTTATATCCATATTTTTATTATAATTTCGCTCTCAGCCTATATTTATCCCATTGTCGACCTTCCTATATTTTCACATCATTACTGGTCGACAATTTTTATTACCTCTAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCATAATGTATCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 4289-4656 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000121.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 4289 33 87.9 31 ...A.......T...........A........G TCAAAACCAATCATTGCAAAAAAACCTTTTT 4353 33 87.9 34 ......C..T...T..G................ CGAGGTAAGTATATCATGGATAACGTAAAAGTAC 4420 33 78.8 37 A.....C.T...A...G..T............C GTTGAACTCATTTCAGAAAAAATAATTTCTTCTTTGG 4490 33 100.0 34 ................................. ACGCTACAATAATACCGATAAATAATATCAGCAG 4557 33 81.8 34 ........TT..AT..G...............C TTAGAGTTGCTTTTATTTTTGCTTACATATTAAG 4624 33 93.9 0 ..................T.............G | ========== ====== ====== ====== ================================= ===================================== ================== 6 33 88.4 34 GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Left flank : TTTTGTTGGTAAGATAATACCAATAAACAGTACCAACAATGGAATCAACCATCGTTTTTTCCTCATCCTCATAAATTAATCCTCCTTATTTGTACTTACAATAATAATATACCACAAGCTTTCGTCTAGTCGCCATAAAATAACGACTGCTATCCTCCTTTCAAAAATATTTCCATTCATATATAGTATATCAGAAATCTCGTGTATTCGATTTTTCTGTATAAATATTTTTTATCTAACTTCTTTAAAGTGTTGGACAGGTCTTATAAAAAAGTTCCACAGAAAAATCGAGAGATTTCAAATTCTGACATACTATATATAAGAAAGTTAGTGCGAATCGGAAGCAACGCAAGAATCCCGGGAGATTCGCACTGCGAAGATAAAGGATATTGTTCTTGCTTTTCTAAAAAAATAGAAATGGTAAAGATTGCAATACCTAATTTTGCATAAACTTTCTAAATAAAACAGTAAAATCGCTATCAATTTTATGCGATTTCGCT # Right flank : GGCAGTAATCATTAGGTTTCTGTCTACCGCACCTTGTATTGGTACATAGATTAAAATGTATCCGATGTACAAGAAGTTTATGATGTTATATTGTTGCTTCCCCATAGGTGCATACTCAAAAAAAATAGCGTGTGAAGAAATATCGTTCACACGTATTAAGTAACAAGTAAGAATGTGAAAAAGTTCTACAGAAAAATCGAATAACTTCGAATTCTGACATACTATATATGAGAAAGTTGGTGCGAATCGGAAGCAACATAAAAAATCCCGGGAGATTTGCACTGCGAAGATAAAGGATATTGTTCTTACTTTTCTAAAAAAATAGAAATGGTAAAGATTGCAATACCTAATTTTTGCATAAACTTTCTAAATAAAACAGTAAAATCGCTATCAATTTTATGCGATTTCGCTGTCGCATCCCTTGCGGATGCGTGGATTAAAATAGACCAGTCCCTAAAACCATTGCTTTCTAATTGCAGTCGCATCCTCCGTGGATGCGT # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,1.15 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 1 90-579 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000367.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf367, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 90 30 100.0 35 .............................. ACTACATACGCTGATGGGGATACATTTGATTTGTA 155 30 100.0 35 .............................. TAACCCCGTAATGGATTGTTTACGGGGTTATATGA 220 30 100.0 35 .............................. GACAAGGTTAGAGCGATTTTAGGACTAGACAAAAC 285 30 100.0 38 .............................. GCGGATTTAGCGGCAGTCACAGGCAACAATAACGGCGC 353 30 100.0 37 .............................. CAGTTTCATGCCCATAATGGCGTATGTTTCGCCTGTG 420 30 100.0 35 .............................. TCCACAGAAGATGAAGAGGAAAAGAATGATAATCC 485 30 100.0 35 .............................. GCATTATAGATAGCGCAGATGACAAAAAATGTCTA 550 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 36 GAATTAATAGAAACATTGTGGAATGTAAAT # Left flank : AAGAATATAAGGGAAAAACACAGATTGAGTCTAAGATCGACAGAAATAGGAGTGAAAAAGTAGGAAAAATGAGGAAAATTAAGTAACGGG # Right flank : CGGACACAAGATTTACTGGATTTTATTATCAAGTTTAGAATTAATAGAAACATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 12876-12386 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000073.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf73, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 12875 33 90.9 25 ................G..............CT AACTGGGAGAAAGCCGTAGAAAAAA Deletion [12818] 12817 33 93.9 34 .....G.......T................... GGAAAAACAACAAGCATGAGAAATCTTGACCCTG 12750 33 87.9 33 .........T...T..G..T............. TCATTGGAATCAGACAAGAATAAAAATCATTTC 12684 33 97.0 32 ................................C AATCACATCGAATATACTAATGATAGTATCTA 12619 33 93.9 32 ...............................CT CTGCAAGGGTGTTGATTTCTTTGTAGCTACTC 12554 33 100.0 33 ................................. TGTAACGGATGGGTCTGCGGAACTCTTATTGAT 12488 33 100.0 37 ................................. AATAATTGTACCCAAAACTTCTAAAACTTTATCTCTT 12418 33 90.9 0 .........T..A..................A. | ========== ====== ====== ====== ================================= ===================================== ================== 8 33 94.3 32 GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Left flank : AATCAACCAATCTCAAATTCTGACATACTATATATGAGAAAGTTGGTGAGAATCGGAAGCAACGTAAAAATCCCCGGAGATTCGCACTACAAAAATAAAAATATTGTTCTTACTCTTCTAAAAAAAATAGAAATGCGAAAGATGGCAATGCCTAATTTTTGTATAAACTTTCTAAATAAAGCAGCGAAATTGTTACCAATTTTATATGATTTCACTGTCGCATCCCTCCTCGGATGCGTGGATTAAAATTTAATTTACAACAAACAAAAGATTGGCCTGATATCTCTAATGGTAGACAGAAAGATTTCGAGTCCGTAAGGAGCGATTGGGAAAATGTCGGAACATACATCCGAAAAGGAACAAAACGAGCGGCAGTGGCGGGCGGAGGAGACGGTATCCCCCACTGACATGAAGTTAAGTCATGTCGCCATAAATACGACATGTCGGTCGTTATTATAGCGACTGTGGATTAAAACAATCCCCCCTACTGGCTTCGTAGT # Right flank : TTCCTAATCTGTCATACTATAAGGGAAGGGATAATATCCCTTTGTTTGCGGGGCAGGCAACGGTCCAGTCCGTCCCGTATACTACCAATTAAACAAATCTTTTGCAGAGCAGGAAAGGAGTTTGCTATGATACGTTTTAAACAGGTCGTATCCGGTGTACTGACAGGCTTTTTATTCTGTGGTTCTGCCATCAGTGGAGCACCACTTATTGCAGCAGCTAAAACAGAAACCACATACAGCCTGACACTCGATAAGACAGAAAACGGTTCCGTCGCTATCTTTGATGCAGAAAAAGAAGCAAAGAAAGATGAGAGCAAGGAGCAGCAGAACACAGAAGCTACTACAAAAGAGAAAGCTTTAACCAAAAAGGTGAAGGCAGGTGATACAGTATCCATTAAGGTAAAGCCGGATGCTAAGTATATCATCAAAAAGCTGTCCCTTATTGATCCTGAAACAAAAAAGAAGCTGGATGTTGAACTTTTTGCTGATGAAAAGCATGA # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 3979-4210 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOE01000151.1 Anaerobutyricum hallii strain TM10-1AC TM10-1AC.Scaf151, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 3979 33 87.9 33 .........T...T..G...............T CAGCTCTGTCCATATCTGCCAGCTCCTTATCTC 4045 33 93.9 32 ..............A.................G GCAAGAAAGAGAAAAGAAACTGAAGGAGAAAG 4110 33 100.0 35 ................................. TCTACAAAATTGCTATAATCCTGTGCTGTAGTAGA 4178 33 93.9 0 ...........................G..G.. | ========== ====== ====== ====== ================================= =================================== ================== 4 33 93.9 34 GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Left flank : AAGTATTTTATTTCTTATTGTAACAAATATAGGCGGAGCAGACTGTCTCATAATGATTATAATGCCGTTATATATAGGGGTTAATGCCTTATATGCCATACTGATTGCTGTGATTGTAAGCATTCCTTATCAGATGCTTGTTCTAAAAAAACATAAAAACAAGGAATACCCATTTATTCCATTTTTAACACTTGGATATATTTTATCACTATATCAATTTTAACAAAAAATCTTTTTATAAAATCTGCCCGATGTTCTAAAGAGGTTAGATAAAAAAATTTATACAGAAAAATCAGTCAATCTGAAATTCTGACATACTATATATGAGAAAATTAGTGCGAATCGGAAGCAACGTAAGAATCCCGGGAGATTTGCATCACAAAAATATTGTTCTTGCTTTTCTAAAAAAAATAGAAATGGTAAAGATTGCAATGCCTAATTTTTGCATAAACTTTCTAAATAAAACAGTAAAATCGCTATCAATTTTACGCGATTTCGCT # Right flank : ATGGGGCGCGAAAAACTATATTATACACACTAAAAAAAGAAAGGAAGAAAAAAATGGATGGAATTATTATCAGAAAGGCAATATTACATATATTAGACAATGGAAATAGAGGGATTATTCTCTCAAATTCCTTATTAAATTTAAGAGATGAGGAGTTAGATTTTATTCATAATCTCATTGGAAAAATCCATGGAAACGATAATTCAAAACATGGAAAGTTTTATCCTGAAACAAGTCTTGTATATGAATTACTGAAAGAGATGAATGAAGATAAGGAAGAAAGTTTTATCAATACATCTCAAGAGATTGCCAAATTACTTTTTAGCTGTATAAACAACGCTTTAGATATTCCTTCTGGAGATTTAATGGTTTTAACCTATCAATTTGAGGGGCAGAGGTATCTTGCATTATTAAAATTAAATTACAAGAGTAGTTACACGCAGCGTATTAATCAATCTGATACTGGGGTTACAACTTCTTTAATTCAAAATACTACATTG # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], //