Array 1 50662-52475 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKD01000005.1 Prevotella nanceiensis DSM 19126 = JCM 15639, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 50662 47 100.0 30 ............................................... CCTAGTGAGAATATGCCTAGTGGCTATGAT 50739 47 100.0 30 ............................................... ATACGCTAGTGCAGTAGCAAGTTATGCAGA 50816 47 100.0 30 ............................................... GAAACAAAGGCTAATCTTCGAATATCCAAA 50893 47 100.0 30 ............................................... ATGATCCTTTACGTTCTAAAGATCGGTCTC 50970 47 100.0 29 ............................................... CCTCTCTCTTTTGGAGTATTGGTAGAGCT 51046 47 100.0 30 ............................................... AACAAAGTAGTAGATGTATTATTTCCTATT 51123 47 100.0 29 ............................................... AATCTTAGGAATGCTATAAGTGCTAAGAA 51199 47 100.0 30 ............................................... TGTTTCCTCGTTATCATCAGCAAGGGTATT 51276 47 100.0 30 ............................................... ATCAGACAAATCTTCATCTTATTTGAACGA 51353 47 100.0 30 ............................................... ATAATCAGAATATGTTGAGTTAACTTCAAA 51430 47 100.0 29 ............................................... ATAACAGAACGATCATTCTCTATAATTGT 51506 47 100.0 30 ............................................... TTATTGGAAAGGTGGACATAACTTAAATTG 51583 47 100.0 30 ............................................... AAGAACCTTGAAAAGGCTATTCCATTCATT 51660 47 100.0 30 ............................................... TTGAAAACAGCATCAATTGATAACTTGAAT 51737 47 100.0 30 ............................................... TCATTATCAAGTGTATATTTGTAAAAATCA 51814 47 100.0 30 ............................................... GAAGCACGATGCAAACCAAATCCGCTTTGT 51891 47 100.0 30 ............................................... GATATTTGCCGTCCATTGAAAGCCAAAGTA 51968 47 100.0 30 ............................................... GAAATACTCCATTAGCTTAAGTTTATCACC 52045 47 100.0 30 ............................................... CGAAAATAGCACTCTTTTTTTTGTCATGTA 52122 47 100.0 30 ............................................... ATTAGGTGATGGAGATGTTTCTTTCTAATA 52199 47 100.0 30 ............................................... GCAATATGGGTCTACCAAAAATGCTACAAG 52276 47 100.0 29 ............................................... TGGTTTACTTGAAAAATATACTTTCAACT 52352 47 97.9 30 ....T.......................................... ACTGATGGTGCTGACAATTTCTACATGAGC 52429 47 76.6 0 ..........G.............GG..AC.TT.GT.....GG.... | ========== ====== ====== ====== =============================================== ============================== ================== 24 47 98.9 30 GTTGCTTATGATATTGCAAAGATATACATTTGGAAGCAAATCACAAC # Left flank : GTCTTGCAAAGTGTTATAGTGGCGAAAGCCGTAAAATATATTATCCTTCTTTTCCTTAATGCAAAGATTAAGCGAGTATAGAATTATGTGGGTAATGGTTCTTTTCGATCTTCCAACCACCAACTTAAAAGAAAAGCGGGACTATATTCTTTTCCGAAAGAATTTAGTAAAAGATGGTTTTATCATGTTTCAGTATTCTATTTACGTCCGACATTGTGCCAGTAGAGAGAATGCTGCAGTACATGTGAAACGTGTAAAATCCTTTATTCCACGCTCAGGAGAGGTTTGTATTATTGTTATAACGGATAAACAATTTGGTGAAATAGAGATATTTAGTAGCTCTGAGCCGCAAAAACCGAACACACCTGGGGTGCAACTTGAATTATTTTAGAATATAAAAAAGAGTCCTAATATTAATATTGGGACTCTTTTTTGTTGCAATTTTTATTTTACATAAACAGGAGATATATTCTTGAAACTCAATTAAATATATCATTCGT # Right flank : CACCATAATACATTTTTATTATTCTAATGAACCATTGCGAGATATGAGGGTGCAAGATGAATGTAAAGCCTTTGTAGGGCAGTGTTTGTGTTTTTCCTGTCTAAAACCATTACAATTACAGACTAAAATCATTGCTTTTGCGCTCCAATTTCATTGCTTTTATTGTCCAAAAGCAGTGAGTTTACAAAGTGGAATGAATGGCGATGAAAAAGAACTCAATAGGAGAGAAAAGCGAGTGGGGTATATTGAAGCCGTGAAAGGGTAGGTTTGTGGAGTGATTAACTCTGTAACGTGTGAGATGATAGCATGAAAAAGCTCTCTAACGATCTGAAATCATTAGAGAGCAATTTATTTATATGATGTAACTTTCTATGCCACCAGACGCCAAATAAAGGCGATAAGCATCGTAACGATGATACCTAAGGCGAGCGGAAGCAAGGTTGCAAGAGCCGTCCACTTCACACTTCTCGTCTCTTTATATATCGTATAGATCGTTGTAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTTATGATATTGCAAAGATATACATTTGGAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //