Array 1 32623-29677 **** Predicted by CRISPRDetect 2.4 *** >NC_008741.1 Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 32622 32 100.0 29 ................................ CACCGCCTCCGTCTTGATGCCCACATAAA 32561 32 100.0 34 ................................ CCCAGCATTGGCCCACCGTTCGAGCAGGTGAGAT 32495 32 100.0 33 ................................ TCCAACAAGTGCGATGCCAGCATGTACGCGAAC 32430 32 100.0 35 ................................ ATCATGCGCACATCGATGTCGTGGCGGACGCGGAT 32363 32 100.0 33 ................................ CAAGATGGTCGATAACTTCGGCAAGGCGAACCA 32298 32 100.0 35 ................................ CCCACGAAGCTTGATTGCCCTGACCCGACGCTTGT 32231 32 100.0 36 ................................ CTCAACGACTCCGTAGCAATTGGTGGGCAAGGGAAT 32163 32 100.0 35 ................................ ACCCAAAGATGGATTGGTGATGATGGGAAGGAATA 32096 32 100.0 35 ................................ CCCTTTGCCGCCTGCTGTTGCGGAGCGGGCGGGCA 32029 32 100.0 34 ................................ TTTTTGTCAGTGGTGGGTTGTGGCTTCTTTGCAT 31963 32 100.0 35 ................................ TCGTCGTTGAACAGCGCCTTGAGCGGGATGACCGG 31896 32 100.0 35 ................................ AACTTGTCGTTGAGCATCTTTGTCAACCGCACGTC 31829 32 100.0 34 ................................ GCGGAGGCCGTGCATGTCATGAGCGGCGACATCA 31763 32 100.0 35 ................................ CCAGATATTCCCGCAATGCCCGTGGTGGGGCAGCA 31696 32 100.0 33 ................................ CTGAACCCGGAGGCCAGTACCGATGACATGGAA 31631 32 100.0 35 ................................ CGACCGAATGCCAACTTGCCGAATGCTGTGTCAGG 31564 32 100.0 34 ................................ GATGTCTCCTATCGCGTCGACTAGACCTGCGGTG 31498 32 100.0 35 ................................ AGCCCCTGCATTCTGGATGTCTGCCGAACCGTCGT 31431 32 100.0 34 ................................ CTGCCGCAGCCCGCGCGCCACATCGACCGCGAGA 31365 32 100.0 33 ................................ GTGGTGCAAATACGCAAAACATGTTGACCGATG 31300 32 100.0 34 ................................ CGGACTAATACGATACGTCCCTTCCGTCCGGGGT 31234 32 100.0 35 ................................ TCGAGATACTCCGTGCGGTGGTACGCAGCCCGCAC 31167 32 100.0 35 ................................ CGAAACTGACCATAGAGCGCATGCCTGCACGCCTC 31100 32 100.0 34 ................................ GCCCCACTGTTGCCCGGACGCCGTGGCCTGCCGC 31034 32 100.0 35 ................................ CGGTATGGATACCTCAGGGTACCTCTCAGCCGTAT 30967 32 100.0 34 ................................ CGTAAGGTAGGCGTACGGCCCCGCGTCGTCGACG 30901 32 100.0 35 ................................ AGCATATGGATATGGAAGTGCTGATAGATGGACAA 30834 32 100.0 33 ................................ TTGTCGAACACCACCAACTGAATATTGGGGGAA 30769 32 100.0 34 ................................ TCGCGCCTCCTCGTCCGATACGGCGGCGATATCC 30703 32 100.0 34 ................................ TCCTACATGGCCGCTGACGACCGCGACCGCTCCA 30637 32 100.0 34 ................................ AGATAGAAGGCGAATTGTGCAAACCCCGGCATTT 30571 32 100.0 34 ................................ CACGAAGGCATCCAGCGGCAATTGGCCGTTGGCG 30505 32 100.0 34 ................................ ACAACCGCCGGCGTGGACTCCACGGCCAACTTCT 30439 32 100.0 34 ................................ ACACTCGTGGGCTTCTCGCCGCCCTTGAGCAGGG 30373 32 100.0 33 ................................ GCGAAGGGCGCGGGCGTCATGGGCGAGGCCGGT 30308 32 100.0 36 ................................ GAGCAAATGTGAAGTCGTCCAGTGTGTCTTGGGTGA 30240 32 100.0 35 ................................ GTTTTTTCGGCCCAGTAGGGGAAATGCTTGGCGCA 30173 32 100.0 34 ................................ ACGGGGTCGTACGCGCCCTCGTCGGGGCGGAATA 30107 32 100.0 34 ................................ ACGTAATCACTCATTTTTCCACCTCCGGCCCGAG 30041 32 100.0 35 ................................ ACGGGGGCCAGCAACATCGACGCGCTGAACGAGAA 29974 32 100.0 34 ................................ CCTATGATGTCCCCAAGGAACCTTGAAGCCTTGG 29908 32 93.8 34 ...........CA................... ACCTGCAGGACGGGACCACGCCTATTTTGAGCAG 29842 32 96.9 35 ...........C.................... GGCAGCGTCGAAGTCCTCAACGCGGTGCTCATCCT 29775 32 93.8 35 ..........AC.................... GTCACCTTGATGGCGGGCTTGATGTCAGCGGCTAT 29708 32 93.8 0 ........T..C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 45 32 99.5 34 GTCGCCCCCCGTGCGGGGGCGTGGATTGAAAC # Left flank : GGCTACCCACCCTTTGTATGGAAATGACGCCATGCTCGTATTGATAAGCTATGACGTGAGTTTCGAAGACCCGGGCGGACAGAGGCGTTTACGGCGCATCGCCAAGGCATGTCAGGACTATGGACAGCGGGTGCAGTATTCGGTCTTCGAATGCGTGGTCGACCCCGCGCAGTGGACGAAGCTCAAGCATCGGCTGCTTAACGAAATGGATGATGAGAAGGATTGCCTGCGCTTCTACTATCTGGGGGCCAACTGGAGAAACAAGGTCGAGCATGTGGGCGCAAAGCCCGCCTACGACCCGGAAGGCCCCCTGATTCTGTAGCGCGAACCCCAAGCGACCCTGTTTTACCTGGCAGGTTCGTGAATATGGCAATATCCTGTTTTCATTGAATGGTGTAACCTTTAATACAGGCCAGTCACACATTTTGGCGGTGCTTCTGACCCGGTTCGCGGAACCGACGTCGCAAAGGCACTACTGCCAACGAGTTTGATGGCTGACA # Right flank : AGCTCTCCCTCTTTGACGACAGCGCGGCACGCCGTCGCCCCCCGCACGGGCTTGGGAGGCGTCAACCACTCGAAATGACGAAATAACCTGGAGATTCAGCGGGGCCGTCACCCGCCTCACAGGAAGAGCAGCAAAGACAGGGCCATCACCCCCATGCCGGAGAAGACGCCCAGAATGCACAGGTGGTGCTCGCCATACTCCTCCGCCGACGGGAGCAACTGGTCGAGCGAGATATAGACCATGATGCCCGCCACAGAGGCGAAGAGCAGACCGAACACCATGGGCGTGAAGAAGGGACGCAGCACCACATATCCCACCAGGGCCCCTATCGGTTCGGACACGCCGGAGAGAAAGGAATAGAGGAACGCCTTCCGGCGGTCGCCCGTGGCGTAGTAGATGGGCACGGAGACGGCCATGCCCTCGGGGATGTTGTGAATGGCGATGGCGACGGCGATGGCGACGCCAAGCGCCGGGTCGCTCAAGGCTGCCGAGAAGGCGGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //