Array 1 729520-728379 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913112.1 Acetivibrio clariflavus 4-2a CloclaDRAFT_scaffold1_ref0000004_ref0000003.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 729519 37 100.0 38 ..................................... CCACCTGCCATTTTGGCAGATTTGGTAAATCCCAGAAA 729444 37 100.0 36 ..................................... AGCATAACACTACTGTCTTTCCCTCCTGATACAGAA 729371 37 100.0 36 ..................................... TTATATTCTCGCTTATTATTTTAAAGTAATTCTGAT 729298 37 100.0 36 ..................................... TTTCTATCCATAATATAACGCTCCCTTTCCTTATTA 729225 37 100.0 36 ..................................... CCAAATCTATATTTTCAGTTATCTTAGTATTTGTTT 729152 37 100.0 36 ..................................... GTATAGTCGGCTGATTTTTGAAAAGTTAATATCGAA 729079 37 100.0 37 ..................................... TCCCATTTATCTGCTGTCTCAGCTGCTTTGTTTGCCA 729005 37 100.0 36 ..................................... ATACTGCTTCAGGATTATTGATAATATCCTGGACAT 728932 37 100.0 38 ..................................... ATGCCATCTATAATGCCCTGCAAATATCGAATAGTGAG 728857 37 100.0 36 ..................................... TTCATCGTAATCCACACCATTGGCAATATTGGATTC 728784 37 100.0 37 ..................................... AAGGTAAGTACGAAGAACTTGATGAATATCTTGCCAG 728710 37 100.0 38 ..................................... CTCCCAATCAATTACACCTGATTCTCTTCCAATTTCTG 728635 37 100.0 37 ..................................... GGTCGATCTAAGGGCACACTAATGCTGATCTATGCAA 728561 37 100.0 36 ..................................... CCGAGTAGGAGGGAGGTAAAGTAGCCCGTTCTACCA 728488 37 100.0 36 ..................................... TTAAAAGCCACCTTACCCACGAAGAATTCATTAATG 728415 37 91.9 0 .............................T.AA.... | ========== ====== ====== ====== ===================================== ====================================== ================== 16 37 99.5 37 GTTGAAGTAGATGTTCCATAAAAATAAGGATTGAAAC # Left flank : AAACAAAAAAGCCGGGAAAAGAAACTGATAGTATAAATAGATTAAGAAGTAAGGTTGATGTAAGAAATAATAGTATTTTTGCTCATGGTTACGAGTTTATAAATAAAGAAAAGTATATGGAGTTTAAAAAAGTGGTTGAAGATTACATAGATTTACTATGTTCTATTGAATGTATAAATAAGGATGAAATATTCTCAATTTGTGAGTTTATCAATCTCTAGAAAAATTTGAAATACAAAAGTATTGAATCTATATATTTATTATGATATGTTGGAATAGGAGATAAAATATTATGGAAAATTGTGGCTGAAAAATTATTGAAAAATTTTTATTAATATGGTTGTAGGTATTGAAATTACTGAGGTGTAAGCTTGTGTTGATAACTCAAAAATGTATAAAAATATGTAAGAATTTGCCGATTTATAATAGGAGAAGCTCAAAAAAGTTCCGTCAAAAAAATCTTGTAAGCGTTAATTTTTAAGCGATACAGCTTTACGGGA # Right flank : TGTCCATATACCATTAACTATTAGTGATGTAGACGCTACATCACGACAGATTCCGAAATCAAAAAATGTTATTGGAGGTGTAAAATGAAGCTGGTGCTTAACACACCGGGCCTTTATCTTTGCAGGCGGGGAGAGTGCTTTCAAATCCAGGACAATAATGAGAAGAAAGAAATCGCTGCTGCAAAAGTGGATCAGATTATGATTACAACTCATGCTGCTATGACCACTGATGCAATTGAACTGGCCCTGGAGAATAACATAGATATAATATTCCTGAAAAGTACCGGTCAACCGATGGGAAGGGTATGGCATTCAAAACTTGGAAGTATAAGTACCATAAGGAGAAAACAGTTATTTCTTCAGGATAGTCCGTTTGGGTTGTTACTTATAAAAGAATGGCTGGTTGAAAAAATGGACAACCAGATAAAATTGCTTAATAAATTGGCAACAAACCGTCGTGATGAAGAACGTCGTAAAATAATAAAAGATGCTTTGGAAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTAGATGTTCCATAAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 755273-753389 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913112.1 Acetivibrio clariflavus 4-2a CloclaDRAFT_scaffold1_ref0000004_ref0000003.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 755272 37 100.0 38 ..................................... GTCAGTTTATTCAAAAAGAGCCTAGTGATATTACTACT 755197 37 100.0 36 ..................................... ACTTTCGAGGCGAAACTATAGATATAACTCAATATG 755124 37 100.0 38 ..................................... GCCATTTCATGCAGTTTTTGTGCTGTAATCCAAGTAAA 755049 37 100.0 34 ..................................... AGGTGCCAGAAAAGAAAACATTGTCTACGTCTAC 754978 37 100.0 36 ..................................... CCATATTGTAAAGCTTGAGCTGAACTTTTGATTGAA 754905 37 100.0 36 ..................................... TAAGTTCTGAAATATATTTCTTTTCAAGTAAACTTA 754832 37 100.0 37 ..................................... AACTCATTTTTATAAAGGTTATATACTGCATTACATA 754758 37 100.0 36 ..................................... ACTTTCGAGGCGAAACTATAGATATAACTCAATATG 754685 37 100.0 40 ..................................... TTGTAACATATTTTCGTATTCATGTCAATAGTTTTTAGAT 754608 37 100.0 36 ..................................... CAAGCATCGACGAGGCATTCAATGTACTAAAACAAG 754535 37 100.0 36 ..................................... CAAGCATCGACGAGGCATTCAATGTACTAAAACAAG 754462 37 100.0 36 ..................................... CAACCCACGGAAAAATATACGAGGCGTCAGCAAGCC 754389 37 100.0 37 ..................................... TAAGCTTGACGTGCTTTCGCATCAAGTTCTACATACA 754315 37 100.0 37 ..................................... GCCACGCAGAGTTTCAGTAACTTATTAAGCTAATCAA 754241 37 100.0 36 ..................................... CTGACCAAGTTTGACCGATCAAAGTTATCTATTGCC 754168 37 100.0 38 ..................................... ATTCCTCCTTATCTTAACCAAAAAGTCAATACTTTCCT 754093 37 97.3 37 ............T........................ GGGATAAACCCTGCCAACACTTCCTTGTGCAAATTAA 754019 37 100.0 36 ..................................... TGTAACATTATACATCCATCACCATCAAAATAACCT 753946 37 100.0 36 ..................................... TCACCTCCATTAATCTCCAGGTCTGACAATTTGCCT 753873 37 100.0 37 ..................................... AAAAACTAATATTTACCATTTTTAAACCTCCTTTAAA 753799 37 100.0 36 ..................................... CTTATTGTCGTATGTCCGTTCCATAAAGTAGCATCA 753726 37 100.0 37 ..................................... ATGTAATAGATGAGGGTTCTACATAGCTTCCTTCCCT 753652 37 100.0 37 ..................................... TTCGTATGACAATCCCGGAAATCTTTCTAGAGCCACA 753578 37 100.0 38 ..................................... TGCTTTTGTATTCGTTTGATGTAATAAGGCTCATTTCG 753503 37 91.9 39 .............T.....C.............C... ACACCTGACACACGCGGCGCTTAGGTCGTAGTACGCATC 753427 37 83.8 0 ..........T.T...........AC....C.T.... | T,G [753391,753398] ========== ====== ====== ====== ===================================== ======================================== ================== 26 37 99.0 37 GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Left flank : ATTAGATAGGTTTATTCATCATTGTCACTTTTTGTAGTTATAAAAGGCGAAAGCTATCGAATGAAGCAAAGCAAGGAAAGCCCTTAAAGCTATATCCCACAAAAGTGCAAGAGAATGAATAAAATTAGCAAGTTACTGTTCTTTGACAAAAACATATTTATATTTTATCCAAACAATTAGGTAGTAGTATACTAAAAGCGTGAAAAAAGTTTTTTAAGTGCGGTTTATAATGAGATGGGTCCATATGATAGCCTGTTAAGGCAGGCCAGTTTATCATACCCCCTCAGCCCTACTTAAAAGAAATACCTACGGGGGTATCGGTGGGCTGGCCTCACTGGCAATGTAATCATAATGGGCGGGAGCTCGTTGTAAACTGGATTCTTGAAAAAGTTTTTTCTCTGTTACATAGAGTTTTTTTTATCTTTTTTAAAGTGGGGAAAATTCTTTCCCCTTTTTGGGGAATTTTTATTGACAATAACAGAATCTAACACCACATGCTA # Right flank : TTTTCTGGTGTGAATGTCAGGGAATGTAAGTAATTTTGTGTATCATAATTTATGTAATCCTTCTTTAGCAAGTAAATTTTAGTTGACAAGGTTTACAGAATATTGTTTTTTATTGCCTTTTCATTATATATTATTGCCGGATTTATTAAGTTTTATACATAAACTTGATTAAATCTGGCAATAATCATTTATAATGGTCAGTATTAGCCTTTTAAACCTATATTTTTAATTTTGTGAGGTCTAGCCCATCCGGCGATGAGGATGAGCCCTTGAGGGCGGTGGGGATGAATGCTTTTAAATATACTCTTCCAGTCTACCTGGATATTGTATCATCAATTGGCTTAACACCCTATCCCAGTTCTTATACCTCTGTGTCCATTTCTTCACTACATTCATTGATGCTAAATATAGCATCTTTTCCAGTGAACTATCGGTTGGAAATATTGTTTTTGTTTTTGTGACCTTACGAAACTGACGATGTAGTCCTTCAATTATATTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 3 763796-758077 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913112.1 Acetivibrio clariflavus 4-2a CloclaDRAFT_scaffold1_ref0000004_ref0000003.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 763795 37 97.3 37 .............T....................... CCCTAATGAAAATAATCCATTAATTGTGTATGTTAAC 763721 37 97.3 36 .............T....................... ATGTTTAAATAATAAAATAATAGGAGGTTAACGACA 763648 37 97.3 36 .............T....................... GACCTAGCTTCTTGTTTCTTTCCTTTTCATGCTTTT 763575 37 97.3 36 .............T....................... TACTGAAAGCCCTAAAAGACTCTTCTAGTAAGTCTT 763502 37 97.3 36 .............T....................... TGTAAATTAAAAGGATGTTTATTATGAAATTTAAAA 763429 37 97.3 36 .............T....................... TTCCTTGATACTTGAAGTATCAAAACAGTATGAGGA 763356 37 97.3 38 .............T....................... CCCTTAATATAACCTTTAGCTCTGGCATCATCTTCTGT 763281 37 97.3 38 .............T....................... CATTTTCGGCTTTCCCTGAAGCTGCTCCTGCTGCTGCA 763206 37 97.3 36 .............T....................... ATCTCAGGTACTTTAAAGTCCATTTCTAGCCTAAGT 763133 37 97.3 38 .............T....................... AAATTTTTAACGAAGTTATGCGGGTTTCAGGACACAAA 763058 37 97.3 36 .............T....................... ACCCCCAGGAAAAAATCTATTTGCTCCAATGAATCG 762985 37 97.3 36 .............T....................... TGAAGGATATAGCTAGGATAATAGTAGAGGCTTTAG 762912 37 97.3 36 .............T....................... TATAAAATCCAATAGCTCTATCTATGAGCTATCGGA 762839 37 97.3 36 .............T....................... CCTGCAGACAGGTATAGTATTAAGGAAATATTGCCT 762766 37 97.3 36 .............T....................... TCGCAATAATAATATTGTCCTGTTTTTTCGCTATAA 762693 37 97.3 36 .............T....................... TCCTATAATATAGGAGGTTGTTATAAAATGGTTATG 762620 37 97.3 36 .............T....................... TTTTTGTTTTACTAGTTACAGGTACTACAGTAACAG 762547 37 97.3 36 .............T....................... TTAGGTACATAAAGATCGCAAAGCCTGGGGTTTTAG 762474 37 97.3 39 .............T....................... TTTATGATCTCTCTCAATTCTCCATTTTTATAAATACTA 762398 37 97.3 37 .............T....................... CTATTATATTACATAACAGTAAATAATATGAATAACA 762324 37 97.3 37 .............T....................... TAGTCAAAACCAATATCATCATACCATCCAATCCAAG 762250 37 100.0 37 ..................................... CTGCAATACAATGTAATAGCGACTGGGGAATATATAA 762176 37 100.0 34 ..................................... TTTTAAAATTCATCCGCAGGAATAGAAAAAGGGA 762105 37 100.0 37 ..................................... CGAAAGAAGTACCCAAAATTAAAAATACAGACAAATT 762031 37 100.0 38 ..................................... TAATCAAAAAAATAGCGGTATATTTAAGTATGTAACGA 761956 37 100.0 37 ..................................... CCGATGAATTTTTCTATTTGTTCTTTTGACACATCAA 761882 37 97.3 36 .............T....................... TATATATGTAATGAAGTAAATCCAAAATGCCAAAAT 761809 37 97.3 36 .............T....................... ATGATAATTAATCCTTATTTATTTGATCCTGAATAT 761736 37 97.3 39 .............T....................... TGCTGGATCATGCGATGACCGAGCATCTGGCGGGACTGT 761660 37 100.0 39 ..................................... TTACCAAATAATTCCTCTGGAGACTTAAAGCCTGTTTCT 761584 37 100.0 36 ..................................... ATTCTTCTAATGTATCAAGATTTCTTGTTCCTATAT 761511 37 100.0 35 ..................................... ATTTGTTCAAAGTCTTTTTTCCTTGCCTGTACGGA 761439 37 100.0 37 ..................................... AACCTGTATGTGTTCCATTTTATAAGTTTGGTAATTA 761365 37 100.0 37 ..................................... AAAAATCTTTTGAAAAAGTGTTGGCAGTCGGTGGCAG 761291 37 100.0 36 ..................................... TCAAAAAAAAATTTCAAAAAAACAATGAGTTCTCAA 761218 37 100.0 38 ..................................... TAGACTTGTCACAACATTTCCGTACATTTGACACAAAA 761143 37 100.0 37 ..................................... AACAATCAGGACCAGGACCATGATAAATATCAATATC 761069 37 100.0 36 ..................................... CACTTAGTGATTCAATACCCCATTTAGGATTTGAGA 760996 37 100.0 38 ..................................... CAAATTGATGTGTAGAAATTGAAAGTAGGTGATACCTG 760921 37 100.0 37 ..................................... CGGTATGATTTTTCAAGAATATTTGCTGCTTCAATGT 760847 37 100.0 37 ..................................... ACATTTTTTTAAGCTCGTTCATATCAACACCGGCCAA 760773 37 100.0 37 ..................................... TTGCTATCTATAAAGATTTTGAAATATCTGTACAAAA 760699 37 100.0 36 ..................................... AAATTGACCTAAATAAATGTTTTGGCACTAACTCAA 760626 37 100.0 37 ..................................... AACAATGTAAATTGTGTTTGGTTGCGGATCTGGAAGA 760552 37 100.0 37 ..................................... AAAACGTGTTGTTTGATACTGAATTTGAGCTCGCCCC 760478 37 100.0 36 ..................................... ACCTTCCAGTTTAATGAGGTTATATAATTCAGATAA 760405 37 100.0 36 ..................................... GGTGTCCCTGTTGAGTCTCGCCCTATTTCTATATTA 760332 37 100.0 37 ..................................... TATATGTAAGTATTGTAAAGATTTGGAAAATAGCTAC 760258 37 100.0 38 ..................................... ATTTCTATGTGGTCGTCATAAACTCGGCTCAGTTTTGA 760183 37 100.0 36 ..................................... CAGTAAACGGAGCAGTTTGGACAAAAATCTGTTTCT 760110 37 100.0 36 ..................................... CTGATATCCACGCCCTCAAGTAAACTTTTTAGCTGT 760037 37 100.0 38 ..................................... CGCTGGTAAAAGAGACATCGAAAATATAAAAAATCTCA 759962 37 100.0 38 ..................................... ATTTCTATGTGGTCGTCATAAACTCGGCTCAGTTTTGA 759887 37 100.0 41 ..................................... TCATATAGCCTTGCATGTATAATCTTTTTACTAATAGCAGA 759809 37 100.0 36 ..................................... TACTTATGGCGAAAACGTTGTTGCTCTGGAAGAACT 759736 37 100.0 36 ..................................... TTTCAACCAATACACTTTTACTAATTCTTCCCATAT 759663 37 100.0 36 ..................................... TCTATATGGAGAAACGGGCAGAACGAGAAACAAATC 759590 37 100.0 36 ..................................... AAATTGATTGAAATAGTGTTTTGCTCACTATTTCAA 759517 37 100.0 36 ..................................... CGCTGTAGGTCAATGGTGTCAATGTTGTTTGGTACT 759444 37 100.0 38 ..................................... ACAATTCAATATCCGGAGGCAAACGTAAGCTGAACACC 759369 37 100.0 37 ..................................... AAGAGCATACCCGACGTTTGCCGCGTACCGAATGAAC 759295 37 100.0 37 ..................................... CCCTTATTCTGTACTCCTTTAACTTCACCACATATTA 759221 37 100.0 36 ..................................... CTATCTTGGTGTATATAACGTCTAATGTTTCATTAG 759148 37 100.0 35 ..................................... CTGCTCCATAAAGCATATTGGTACTTACTACAGCT 759076 37 100.0 37 ..................................... TTTTTTTGCTTATAAAAATATAAAATTTATATTGACA 759002 37 100.0 39 ..................................... AAAAAGGTATTAGAAGCTATAGGCGAAGAACATAAACCA 758926 37 100.0 37 ..................................... CTAAAGTAACAAGTACTTTAGTCGATGATAGAGTCCA 758852 37 100.0 36 ..................................... TTTTTGGTTTTGATTTACTTACATGGTGAGTATCCG 758779 37 100.0 37 ..................................... AGTAATGATCTTGTTGCTATTTCTCTAACATATACCG 758705 37 100.0 37 ..................................... TTTTTACTCTATCAATAAAGATAAATAATATTATTAA 758631 37 100.0 36 ..................................... CTGATAGCGGGAGACCTTGCAGGCGTTCGCCTGCAA 758558 37 100.0 38 ..................................... ACTGACACCCCTGGAGGTACCCAGTCAATGCAAGTCGT 758483 37 100.0 37 ..................................... TTACCAGTGATTGAGCCGGTAATGAACATGATTGCAG 758409 37 100.0 36 ..................................... AAACTTTTGTGTTACTATCTGTTATTACTTCTTTTA 758336 37 100.0 37 ..................................... TGTGTACATATAAGAGCTTTTACTGCCTCAGTAACTA 758262 37 100.0 39 ..................................... AAGAAATTATTAAAGAAAGTAAAGATTATGCTATATCAG 758186 37 100.0 36 ..................................... ACAGTATCTAATCCGCCATCTTCGTCCAATTTCACA 758113 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 78 37 99.2 37 GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Left flank : ATTCCATAAAGGAACTTTCCGACAAGGTTATCAACTCACCCATCTATCCGTCGCTTTTAAAGAATTTGATTGAGATAGAGTTCTTTTTGATAAAAGCAGAAGTGGACAGGGCAACTAAAGTGTTGACGGAGTATAGGGATATAAAGCCTGTATTTGTAAATGCAATTAAGGAGCAGAACAGGATATTGGAGGAAAGCCTTGAAAAAATCAGGAGATTTATGGAGGAATAGGAACAGAGAAGTTGAATATATAGTTAAATTGTGATATGTTAAAAATGAAAGAGATGGGTATATGGAAATATGTGGATGCAAAATTATTGGGAAATTTGAAGTCACAGGCTTGTAAGTATTGAAATTTGGGGGTTATAAGCTTGTGTTGATGATTAAAAAATGTGATTTTTTATATGAAAAAATTGTGTTTTGCAATAAAATTAGCTCAAAAAAAGTCCGTCAAAAAAAGCTTGTAAGGCTTGTGATATGAGGGATTAAGCTCTGCGGACT # Right flank : TCAGTTATTTCATAAGTTTTTATGGGTGTCAGTGGTAAAATTAAATTACCCGGTTTCGGGAAAGAAAATTCCCCACCTATTCACAAACTTCTGCTTGTAGATTAACATAATGTTAATTATATAAGTGGGAGTCGATAATAATGTTGGGGGTAGCGATGCATACAACAATACAAACTTTATCAAAAAAAAGGATATAACAAGACACAAATTGCAAAAATACTTGAAATTGACAGAAAGACCGTAAGACGGGTTCTTAATGAACTTAATGAGAAAGGAATTGTTGAAAGAAAAGAAACTTGCTCAATACTTGATCCATATAAGGAATATATATTCAGATACAAGTAACTAAAGACTTAAAAGCAATAAGAAGTATATCAGGATTTAGTGCGAGAATTTGGATTTCAGGGTAGTTATGACACTGTAAAAAAATATGTTGCTAAAATAAAAAAATCTCCCACCTAAAGCATATATGGGTACTACACAGTCTTCCCGGTGAAGAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Alternate repeat : GTTGAAGTAGAACTTCCAGTAAAATAAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 4 4178231-4179833 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI913112.1 Acetivibrio clariflavus 4-2a CloclaDRAFT_scaffold1_ref0000004_ref0000003.2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 4178231 29 100.0 40 ............................. ACAATTTATAGGTTGGTGCTTGCGTCGGAATCACGGTCGG 4178300 29 100.0 36 ............................. AATGATTATAATGGTGAAAATGAAGATCCAGAGTAC 4178365 29 100.0 36 ............................. GTCACAAAAACAAGGTTCGGAGAAGTGGAAGGACTT 4178430 29 100.0 38 ............................. AGTGTTTATGAGCAACATATAGAAAGGGTAATATATAG 4178497 29 100.0 38 ............................. AGTGTTTATGAGCAACATATAGAAAGGGTAATATATAG 4178564 29 100.0 39 ............................. TATTCGGCTTCTCTGGGGTCGCAGGTTGCCCCGAGATAA 4178632 29 100.0 37 ............................. ATGGTTAAACATTAAAATAATAATATAAAATAAATAT 4178698 29 100.0 35 ............................. AAGAGAATGAAAGATAAAATAATTCAATATAGGGA 4178762 29 100.0 35 ............................. AAAAAAAGTTCGCTAAGGGTTAGTATTACCCTTAG 4178826 29 100.0 37 ............................. GTTGCTCTTCCCGTTGTGGTAAGCTTTATTGCCTTTA 4178892 29 100.0 35 ............................. ATACATGAAAGTAATGTTCCTGCTTCAGCTCTTTT 4178956 29 100.0 34 ............................. ATATAATCCATAAATACAAAATCATCATTTTTTA 4179019 29 100.0 36 ............................. CCTGCAAGGGTAGTTTTTTATTTTACAAAAAATTTT 4179084 29 100.0 37 ............................. CAAATTAAAGAATTATATATAACAGCACAAGCGAAAA 4179150 29 100.0 36 ............................. GGTAGTGGAACAGTTATTAAAACTTTAGATCAATTA 4179215 29 100.0 37 ............................. TTACTAAAAAGAGTTTAAGTTATTCATTGCTCCAGTA 4179281 29 100.0 36 ............................. TCCTCTATAGGTGGGAGATGAATTGCATACTACAAT 4179346 29 100.0 39 ............................. AAAGAAGAAACAAACACAGATAGAAGCAAGGTAGAAGAA 4179414 29 100.0 37 ............................. ATTCTTGTGAATTCAAGAATGAGGAAAATTCAAGAAT 4179480 29 100.0 35 ............................. AGATTTTTCATATCCTGAATTGTTTCTTCAAATAT 4179544 29 100.0 35 ............................. ACACTTCTTTTAACTTTACTTGCTCCTCATTCCAC 4179608 29 100.0 34 ............................. TAGCATAGCCATTTTTGGTTGTCCAATTCTATAA 4179671 29 100.0 38 ............................. GTAAAGGAGGAAAGAGTGGGAGGAATAGGTTCAACTAA 4179738 29 100.0 38 ............................. AATGCTATGCCTGAATCAGTTAAAGACAGATTCACTGA 4179805 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 25 29 100.0 37 GTTGTTCTTTAACTATGTGGGATGTAAAT # Left flank : AATATTTTATTGATGATGAAATATATAAACCCTTGAAAGCGTGGTGGTAGATATTTTTGTTGTATTGACATATGATGTTGAAGTTAAGAAAGTTAATAAAGTAAGAAAGTTACTAAAAAAATATTTAATTTGGACACAAAATTCAGTTTTTGAGGGAGAGATTACAGAGGGCAAGTTGCAGAAATGTATTGGACAGATTGGTAAAATTATTGACAAAAATGAGGATTCAATATATATCTATGTAGTAGAAATTCCAAAAAATATTAATAAAATTAAAATTGGAAAAGAAAAAGCTTTAGATGAATTAATATTATAATTTTGCAGCAAACCGGATTTTTATAAAATTTACTTGTAGCATTTTAAAATCAGATGCTAGGAAGCATATTTGAGTTTTTTATGAAAACATTATTGGAAGATTACTGCAGTTTTATTTGATTTCAAGGCTCATGAATCCTATAAAAAAGGGATAAAATAGAGCTTTTTAGAATTGTTGAAAATGG # Right flank : TATATACATAAATGTTTCAGAACAAACAAGATATAAGTTGTTCTGAGGATGTAAAAAAATTTGTGTATAGATGATTGAATGTTCTCCTTCTTGGCAAGGATTAATAATAATAAAAGCTAAGGAGGAGAACTTTATGTCAACGTTAACAAAAGAACAAATCAAACAATTAGTTCGGGAAAATAATTTCCAAAGTGTATCTGATATTAATGAATATCTTAAAGACATTTTTAAAGATATTAATACAAGAACTTTTAGAAGCAGAACTTGAAGCAAAATTAGGATATGCTAAAGATGATGTAGAAAATTAAAAAAACTGATAATAGTCGTAACGGTTATACGCCTAAAAAAAAAATAAAAAGTGAGTTTGGAGAAATTGATATACAAGTACCAAGAGATCGTAAAGGCGAATTTCAACCTAAAATTATTCCTAAATATCAACGTAATGTTTCTGGAATTGAAGAAAAAGTTATAGCTTTATATGCAAGAGGAATGTCTACAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCTTTAACTATGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //