Array 1 65780-67597 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVMI01000038.1 Streptococcus dysgalactiae strain 302_SDYS 519_85113_3852468_290_,...,348+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 65780 32 100.0 34 ................................ CATTAGAAAAGAACCAACATTCACGGCTCTTATC 65846 32 100.0 34 ................................ ATGGAACTCTATCAAAGTATAATAGACCTCTTTG 65912 32 100.0 33 ................................ ATGATTAAAAATTCCTAACAATATTATATCATG 65977 32 100.0 35 ................................ AAGGAAATAACCGAGATTCTCTGTATAGTGCTTGT 66044 32 100.0 38 ................................ TCGTCTAATGTTAGCTCATTCCAGCGACCGCTCTCAAT 66114 32 100.0 33 ................................ TTTTGCCTGATTAGAATACTGTGTCAGCTTATC 66179 32 100.0 33 ................................ CAATTATATTCGGATTCGGTATCTCAACCGTGT 66244 32 100.0 35 ................................ CTCCAGAACGCTTCTCGCTCCACCCTTTGCTGTTT 66311 32 100.0 34 ................................ TTTATAAAATAGGTTAAAAAGTTAGTAAATACCC 66377 32 100.0 33 ................................ AACTTAGCTTTAAAAAAAGCTAATGAAAGATTG 66442 32 100.0 34 ................................ TTTTGTTAACTCATTGTATATATGTGAAACAAAT 66508 32 100.0 34 ................................ TTTATAATCTTTGTGTAATAATTCTTTTGTACCA 66574 32 100.0 33 ................................ TATTTTTGTTACAAACTCATGCTCCTTAAACAG 66639 32 100.0 35 ................................ ATCACCAGTGAGCACTTTATAAATAGGGTCGATAA 66706 32 100.0 35 ................................ ACTAAAGAAACGATTTCACCTAGCAAAGAGTTGCC 66773 32 100.0 33 ................................ TTGAAATTAGATAAACCATCGTATGAAGAAGTT 66838 32 100.0 33 ................................ TTTGGTGGCTATATATAATTCTAATGATGCCCC 66903 32 100.0 34 ................................ ACTCAATTTATTTGTCTTAGCTTCGGCATCTGCT 66969 32 100.0 35 ................................ GTAAGAATAGGTTACTCTTCCATTGGCATCTCGAA 67036 32 100.0 33 ................................ TATGCTACACAAACCTTCTAAAGATGAATTATT 67101 32 100.0 34 ................................ AAGAGCTTATAAAGCAGCTCGAAAAATCCTTGAA 67167 32 100.0 33 ................................ TAAAGATGCCTTAAAAAATCACGTTGATAGTGA 67232 32 100.0 35 ................................ TTTTTATCATAATGCCAACGTACAAAAGCAAGCGG 67299 32 100.0 36 ................................ CTTACGTCTCAACAACTCTCTTCACATTTGCGACTT 67367 32 100.0 35 ................................ GATAAACGAGAATACTTTTATGATTTCGTCTGTGT 67434 32 100.0 34 ................................ GTCGTATGTTAGCATAAGTACCTCCTTATCTTAT 67500 32 100.0 34 ................................ GTTCTGATTTTGGCATGTCCGTCAAGGATGTCAT 67566 32 90.6 0 ............................C.TC | ========== ====== ====== ====== ================================ ====================================== ================== 28 32 99.7 34 GTCTCACCCTTCGCGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACTGAAACATCGGCGGGCAGAAAAAGATTGCGTCATGTTGCTAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCGGAATTTGTGGATATAAAGCACCGATTAACACAAATTATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAACCTAGGTTTCACAGAAAACCCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTCTTCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCT # Right flank : CCTAGATTTTTGATGGATCTATTTTGAGTTTTTCTTCACTCATAAATTTCCATTTATTTTCTCCCCTCTCTTTCCCCCTCACATATGCTATAATAAGCTTAACAAATGCATGGTAAAGGAGTTAGAATGGCTAAGGTTCGGTATGGGATTGTGTCGACGGCGCAGGTGGCCCCTCGTTTTATTGAGGGGATGCGTTTGGCTGGCAATGGCGAGGTTGTGGCGGTATCCAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTGCCTAAGGCTTATGGTAGTCTTGATGACATGTTGTTGGATGCGTCGATTGATGCCATTTATGTAGCAAGTATCAATCAGGACCATTTTCCTGCGGCTAAGAAGGCTTTGCTGGCAGGCAAGCATGTTCTGGTGGAAAAACCGTTTACCTTGACATCTGCTCAGGCTGAAGAACTTTTTGCTTTAGCGCAAGAGCGCGGCTTGTTTTTGATGGAGGCTCAGAAGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCGCGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //