Array 1 669358-671277 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDXY010000008.1 Lacticaseibacillus paracasei strain UBLPC-87 H7K68_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 669358 28 100.0 33 ............................ TGAACGCGGTTCTAATGTCTGACAACAACGGCG 669419 28 100.0 33 ............................ CACGTCCCGCTTCGTCTCATTGTTCATCGTCAG 669480 28 100.0 33 ............................ CGCCTCGGCTTGATTGAGCACCTGAGCATACCA 669541 28 100.0 33 ............................ CCCAACTAACAGAGACTTTTTCATAGTGAATTC 669602 28 100.0 33 ............................ CGAAGTTACGCCGCCACAAACGCCGAAGCTTGT 669663 28 100.0 33 ............................ TCAGTCCTTCGTCCAGAATGTCCTGAATCACGC 669724 28 100.0 33 ............................ CTGTGTTTCCCATAGCACCCAACCCCCAATCCC 669785 28 100.0 33 ............................ CGTCATGCAAACAACAAGGGGGACAATATGAAG 669846 28 100.0 33 ............................ CAACACTTTTGCTCCGAAGGTTGATTCGATCGG 669907 28 100.0 33 ............................ TGGTGTTATCAATAAATTGATTGCCAACATAGT 669968 28 100.0 33 ............................ TGACAAGGCCAATACGGCTTAACAAAACATCAA 670029 28 100.0 33 ............................ CTATACTTTTACTGGTGCAGGCAAAACTTATCC 670090 28 100.0 33 ............................ TGGGCGAACCGTTGCACAGGACACGCCACAGCA 670151 28 100.0 33 ............................ TGGATTCGTCAAACTCTTAGTTTTGAGAATGAC 670212 28 100.0 33 ............................ CCATAGAAAGAGGCACAACGACACTCCCACCAG 670273 28 100.0 33 ............................ CACGCTGAAACAGATTTCGGTTGATGTTGCTCG 670334 28 100.0 33 ............................ CAGAATTAAAATTAATGGCGCCAATCTTATCAA 670395 28 100.0 33 ............................ CAACGCTAGACGACGCAACTCAAGAACAAGTCG 670456 28 100.0 33 ............................ CAAGCTAACCTTTCGCCTAGATCGTCTTGATTT 670517 28 100.0 34 ............................ CAAAAGTCTGAACGCGTTTATCATCTCGATTTCA 670579 28 100.0 33 ............................ CCATAGCGGCGTCAACATTAGTACGCTCAATCT 670640 28 100.0 33 ............................ GGGGATGACTGTATGAACGAACGCAATGAAAAA 670701 28 100.0 33 ............................ TTTCATGGTGCCCTCCTTATTGCTGTGGAGCAA 670762 28 100.0 33 ............................ CTAATGTTACTGATATTTTTATCAAGCCATTTG 670823 28 100.0 33 ............................ CACTTTGTATTTTCCAGCCATTTCCCACTTCAC 670884 28 100.0 33 ............................ CACTTTGTATTTTCCAGCCATTTCCCACTTCAC 670945 28 100.0 33 ............................ CGCTGTCTTGCCTCACGCACAGTTTCAGCAGCC 671006 28 100.0 33 ............................ TGGAGATCAAGATGAGTATTATGCATACGTTGG 671067 28 100.0 33 ............................ CGACTGATACTTCTCTGAACCGGTTCATTTGTG 671128 28 100.0 33 ............................ TGCCATTCCACAGTCCGCTGAAGAATGAAGCGA 671189 28 100.0 33 ............................ CACACGATGACGAGCTTGGCAGTCACTCGGTTA 671250 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 32 28 100.0 33 GTTTTCCCCGCACATGCGGGGGTGATCC # Left flank : GAACGAGATGCAATTATTGCCATTGGGGCGGTAAAAGGACCGTCAGTTAACGAAACCGAAAAATTCACTACCTTGGTGAATCCACGAAGGCCGCTTCCATCAACGGTTGCCAAGTTGACGGGATTGTCGGCGGAGGAGTTGGTTGCCAATGGGATCAGTCTGAGCGAGGCAGTGCAGGCCTTACGGGATTTTACCGGCTCGCTCCCTTTAGTCGGATATAATCTGCGTTTCGACATGGGATTTCTTTCGGCAGCGGGTCGTGAAACTGGGTTAACGTCTTTTGGGAATCATACTTTTGATTTACTACCGCTTGTTAAGAAATCCAGTCGCTTTCTGGATAATTACAAGCTTAGTACAGTGCTGGCACATTATCAGATCGATAACGAGCAACCGCATCACGCGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGAATCTTAACGATTGGCAAACGTTGATGGGATAGGGATTTTTTAGT # Right flank : CCCTCTGCCCAGTCACCAATCGTGTATCCAAAAAAGGGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTCTCAGAACTGCTCATTGCTGCACTTGTCTGTTTCTTGTCAGACTCAATTGTGTCTTGGCTAATTGCCGCTTGTCCGCTCGCATCGTTCTGGTGTGAGGATGGATCGGATTTTGGCGCCGCACGGTCATGTTCGGTGATGTTTGTCTCACCGTTGTCGGCTACAGGGACAACGACGCTGCCGACCTGGGTCAGCATCAACATCGCCAACATGACGATATGGATCAACTTCTTAGGCATCTGTGCGCCTCCTTCCATTGTTTCCGGCGTCTCTCTTCTTCCAACACCAGCTTAACAAGTTGACCCCGCGCAAAGGAATGATAATGTTCGTTATTTAACAATATATTTTTAACGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //