Array 1 181701-184350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIPRF010000004.1 Klebsiella pneumoniae strain 2019_OU_BfR0018 contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181701 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181762 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181823 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181884 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181946 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182007 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182068 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182129 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182190 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182251 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 182312 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 182373 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 182434 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 182495 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 182556 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 182617 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 182678 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 182739 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 182800 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 182861 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 182922 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 182983 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 183044 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 183105 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 183166 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 183227 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 183288 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 183349 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 183410 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 183471 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 183532 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 183593 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 183654 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 183715 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 183776 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 183837 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 183898 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 183959 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184020 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184081 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184142 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184203 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184264 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 184322 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //