Array 1 683631-683956 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050262.1 Lentilactobacillus hilgardii strain LMG 07934 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================================================== ================== 683631 29 96.6 32 ............................G TTACATAAACTTTTGAATGCTTCCAATTATTA 683692 29 100.0 32 ............................. TATTCACGAGGAATTCCCAGAAAACTAGGAGG 683753 29 96.6 32 ............................C AATCGATGCCTTTAACCACGGATTTTGTCAGC 683814 29 96.6 85 ............................C TAACAATGCACAGTAATAAAGGTTCGGTTGAGGTATTCCCCATGTATGATCCCTATCGACCGGTTCGCAATTACCGGCGACGCAC 683928 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================================================================== ================== 5 29 98.0 46 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : TATAATATTGTAAATTAAAAACGGACTAAGATGTGTTTTTGTTGAAAAACGTGTCTTAGTCCGTTTTATCATATGACGGTGTCTAGGTTTCCTGGCTTTTAATTTTCTTGCCAAAGTCGGTTTCACCAATCTGACAGCATTAGGCTATGTATGGAAGATGGATTTTTAAATGTGATCAATAATGAAATGGGCTCCAATCATAATCTTCTCAATGGGTCATGGCTGTAAAACTATGACTTATTGAGAAGATTTTTTAGTTGACAGTTTTATCCGCTGAATAGACGTGCAGTGAGGTAGTTAGATTGCTGCCAAGCAGACATTGTTTCAGGTAAATCCCAGTGAAGTTTGGATGCATGCCTTACAGAAAACTTCAAATTTTGGAAATCTGACTTGAAATGAATTAATTTTTAGGATAGCTTAATAAGGAGATGTGTTTTAAAACTAAGTAAAAATGGTGTTGTTTGTTTTTTAGAATGGCGGTATGACGAGGATCCTTTAGT # Right flank : TCAACTTGTACACTTCTGGTACTAAATCACTTGGCGCTTTTTTGTAGCTTGGATTCATAAACGAGTAGTAGGTATTCAGCGAAATTAAAATATTTAGAGCGGTTATTCCACCAGTTAAACAAGTCGTTATCGAATTAATATGACCAGCATCTACTGCATAAGCAATGTGCTGAATGGGGTCGTCACTTGGCAATTCCTCAAGGGGATGGAACAAATTTATGTTATAAACATTAGTTCCTAATCCCACCGTTTCGCCTAGGTACAAGTAGCGGTAGTAGTCATAATCGTTTTCTTTGTACCACTCAATTAACTTCAATTAACGCCTAACTTGTCATCTACCCATTCGTTGATCCATTCATTCATACGGGTTCTTCGGTGGATTGTAGGAATAATAGACCTGACCATAATCAACCCATTTGGACTTTTGTCGGATAAAGGTTGGGTTAGTTTGGTCAAATACCTCCGGGCTTTTAAAGTTAACCGCTTCTTCATACCATAAG # Questionable array : NO Score: 4.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-1.22, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2176683-2174798 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050262.1 Lentilactobacillus hilgardii strain LMG 07934 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2176682 36 100.0 30 .................................... AAAAGAAGCCAACTAAATTTAGTCCATGAG 2176616 36 100.0 30 .................................... ACAGATCAATAAAGAAGCAAACAAGCTGAT 2176550 36 100.0 30 .................................... TCCCCAACCAGATACCTCCGCATGGCAGAA 2176484 36 100.0 30 .................................... GGCAACGGTTATCGATGTCACCGCCCAGAA 2176418 36 100.0 30 .................................... TTGGTAATTTGTCAAGGTACTCCAGGACAG 2176352 36 100.0 30 .................................... AAACTATCTTTGAATTTATCAACAGTTTTT 2176286 36 100.0 30 .................................... AAGAAGGGCAATCCATCGTTAAGAGTTCGT 2176220 36 100.0 30 .................................... CTTGGGCGCATACCCCTGGCGGTGGCTGGG 2176154 36 100.0 30 .................................... TAGTTTTTAAATTTGATCAACATCACTCAT 2176088 36 100.0 30 .................................... GAACGGGCCAACAAGTACGGCGGTGCAACT 2176022 36 100.0 30 .................................... TGCTTTATCAGCCATATTATTTTTCTCCTT 2175956 36 100.0 30 .................................... ATGGACCCGTTAAGATGCCTATGCCTGGTC 2175890 36 97.2 30 ...................G................ TCGTCTTGCTTTTTTAATACGTAAATACTC 2175824 36 100.0 30 .................................... TTAACTTCGATGAAGTGACATGTCTTTTCT 2175758 36 100.0 30 .................................... AAGGGAAATCGGTTTTACAAATATGCTGCG 2175692 36 100.0 30 .................................... TTTGAATTGATGAAATAATGTTTTCGCCTG 2175626 36 100.0 30 .................................... CCCACCGACAACTTTATTTGCAATCCAATT 2175560 36 97.2 30 ..................................T. TCTGATACTCGCCGTTAGGGTCCTTGGTTG 2175494 36 100.0 30 .................................... CTGGTGCGCTAGAAGCGTTCGGCATGCGTG 2175428 36 100.0 30 .................................... AAAATAAATTGGTTGACTGTGGTGATCCAA 2175362 36 100.0 30 .................................... TGCGCCAGCTCGTCATCACCGCTAACCATA 2175296 36 97.2 30 ...............T.................... ATGTTATTGATTCAATCGGCGACGAATGGG 2175230 36 100.0 30 .................................... ATCGCCAAACCCTGACTATCGGCTTTCATC 2175164 36 100.0 30 .................................... AAATCGGTAATATGACTAACATAAAAGTAT 2175098 36 100.0 30 .................................... AAGCTACGTTGGCTACGGAACACGTTTTTA 2175032 36 100.0 30 .................................... ATCATCAAACATTTTGCCGATGATTCACTA 2174966 36 100.0 30 .................................... ACAAGAACTGGAACGCAAGATGAAATCGCA 2174900 36 100.0 30 .................................... AGATGTACTGGAGCGCAGAAGTCGATTTTG 2174834 36 91.7 0 ...........G...................A...T | C [2174800] ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.4 30 GCTTTAGTAGTAGTTCAAAACAATGATGTTTTATCC # Left flank : GGTGAGGAGATTGACCGACGCTATTTGAGTCGAATCACGAAGGCGTTTCTTGATGACTTAACCGATCCACAAAGAAATAAGATCCATGATTCGTTGAACAGACTTTACAATACGGTTCAGGAACAGCTGTACATGATCGATTTGCCCATTGAGGTCACCTATGATTTTGATTTGAAAGAACTCACAAGATTTGCAAAAATTCATTTTGATTCTGGTACTGCCAACAACCCGTGTGCTATGATTGAATCAATCCTTAAAGTGTATGAAGAATGTCATTTAAAGACGACTTTAATTTTTACCAATGTCAGACAATATCTTTCAACCGATCAATTGAGAGAGATAGAGGCTATGATTAAAGAGATAAGGGTGTCGGTTGTACTTATCGAATTCACAGAAATGGAGCATCGAGATTTCTATGGAAACGCTGATTTTTACTACATCGATGAAGACTTCGTTGATTGGCATAATGCTAACCATTAAATTATGATGATAATTTAACG # Right flank : TATGACAACTGATATTGCTCCTATACTGAAATTTGGTACCAAAATCATTAGATTTTGTGTCATAATGATAAAAATCAGAATAGGAGCTTTTTTATGAAATATTATTCAGATGAATTTAAAAACAACATCGTTAAGCTTTATCACAATGAAAATCGTTCAAAGAAATCCTTAGCCAATGAATATGGGGTTCATCCAACCACCATCAGTCATTGGATCAAGCGGGCCAAATTAGTTGAACTACCTGACGGTGGCGTAACGAGTGTTGAAGCCTTCAAGCAACTACAGAAAGAAAACCAGCAGTTAAAAGAAGAAAATGAAATTTTAAAAGCAGCGGCGGTGTTACTGGGAAGGCATTAGGCAAAGTTAAAGCCATAGACTTTATCAACGAACAATTATGTAAACACCGCCTCTGGATAATCTTGAAAGCCTTAGGGCTTTCTAAAAGTACGTATTATCACTGGAAACACTATCAGATAAGTCGTCATGATAAACAAGATACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGTAGTAGTTCAAAACAATGATGTTTTATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //