Array 1 8163-11738 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATXS01000011.1 Halorubrum ezzemoulense DSM 17463 H617DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8163 30 100.0 36 .............................. TCGGCGAAGGTGCCAAGGTACTGCTGGCCGCGGGTG 8229 30 100.0 35 .............................. GACCACGACACGGAAGTCGTCTCGACCGATCGTTG 8294 30 100.0 36 .............................. CTCGTACCGCCAGTAGTTGCCGGCCGGCGCGGGCTC 8360 30 100.0 36 .............................. CGAGTCCGATCCGTCAACTCATCGGGCGTCTCTGCG 8426 30 100.0 35 .............................. GTGTCATCCTGCGGCTTCGCGTTCGTGAACGTCGC 8491 30 100.0 37 .............................. GTCTCCGAGACGTGTTGGCTATTGATGTTCACCGCGG 8558 30 100.0 37 .............................. ACCTGCCCGGACGTGAGCGCGGTACGAATGGGCGCGT 8625 30 100.0 36 .............................. ATCCAGCTTGTCATGGCGGCGTTCGGGATCACGAAG 8691 30 100.0 36 .............................. GCCGCGAGCGCCGAGTGCGTCCTCGAGAACGGCCTG 8757 30 100.0 35 .............................. AACCGTGGGTATCAGGGGTTCATCGACCGGGACAA 8822 30 100.0 35 .............................. GGGATTAACGGAACGGATATTCGGACCTTGAGGGA 8887 30 100.0 35 .............................. TACTCCGGGATCGGGCCAGCGATGCGTCTCTCGGA 8952 30 100.0 37 .............................. TGCGGCCACGTCCCGTGCTCACCTACACGTACAACAC 9019 30 100.0 36 .............................. TTCACGCACACGTACGACTGGTCGGGCCACGACAGC 9085 30 93.3 35 ..................C.G......... ATGGCCCAATGGGTCGCGTTCGACGCGGAGCGTGA 9150 30 83.3 33 ...........G...CTA..G......... TTGACCGTCGCCGCCGGGATGTCGTTGCGGATG A [9172] 9214 30 90.0 37 ......C.........T...G......... GGCCTCGGCCTGCGAGGGCAGCACGGCGTCGTGGCGC G [9229] 9282 30 90.0 35 ......C.........T...G......... GGGCTCCGCGTGTGGGGGCTGATCACCGACGTGGG G [9297] 9348 30 96.7 36 ................T............. CGACCTTCGCATTTCCGTATCGCCCCTTGATAAACT 9414 30 96.7 34 ....................G......... GTCCTTGCGTCGGAGGTAGACACGCCACGCTACG 9478 30 96.7 34 ....................G......... CGTCTCGTCAAACACGACATTACTCGGGTAGCGG 9542 30 93.3 35 ................T...G......... TTGAAGGGGCGACTCCGGAGTATCGCTCGGACTAT 9607 30 83.3 35 ...........GT....A..G........T TGCCACTCGTCGAGCGGGGCGAACAGCGTCGTCTC 9672 30 86.7 36 ........T.G.....T...G......... GCGTACGCCAGCGACAACGGCGTCACCGTGACGCTG G [9687] 9739 29 90.0 35 ................-T..G......... CCGCCGGCGCGGTGCGACACGCGTGAGGACGGCGA 9803 30 93.3 37 ................T...G......... ATCGAGGGCACGTCGCGGGCGACGATCAACCTCGCGA 9870 30 93.3 35 ................T...G......... ACGGAGACGGTGACACAACGCGGCCGGCGGTACGC 9935 30 86.7 36 ........T..C....T...G......... TTCGTGAACGGGCAGTTCCGCGCCGGCTTCGAGTGT G [9950] 10002 30 86.7 34 ...............CA...G....A.... GACATGTACGAGCTCGAACAGGCCATGCGCGAGC 10066 30 93.3 37 ...C................G......... CGCTTTCGCATCGCCCGCTCGTTCATCCGCTCAGACG 10133 30 96.7 35 ....................G......... CACGACGAATCGGGTGATACTGTCTACCCCTACTC 10198 30 90.0 38 .......G..C.........G......... AGTCGCTCAAGCCCATTATCTAAGACCTTTTGCCCATA 10266 30 90.0 36 ...C......T.........T......... TCGACCCGCAGCCGGTAACGCTCCGAGTCGACGAGG 10332 30 86.7 36 ...............CT...C........A TTGATTCCCACGTTCACTTCACGTGGGTTGATATCG 10398 30 93.3 36 ................T...G......... GCGTACGGTGCGAGCCGCGCGATCTCGTCGCCGAGT A [10413] 10465 30 86.7 34 ........T.G.....T...G......... AGGACAAAGGCGTAGTCCGCCTTTTCCATGCCGT G [10480] 10530 30 86.7 35 ........T.G.....T...G......... AACTCGGCCGCGAACAGATGCTCGCTGGCGGCGCG G [10545] 10596 30 86.7 35 ........T.G.....T...G......... GACCAGTTCCTTCGCCGGAACACCGTCAGGAACGA G [10611] 10662 30 83.3 34 ...C...........CT...T........T GTTTAAGTCAACGATGAGACTCAGTGGGTGAACC 10726 30 90.0 35 ...C.........T..............T. TACACGCTCGGCAAAGAAACGACATGGCAACGGTG 10791 30 93.3 34 .....G..............G......... CCGTCACCGTCGCTATCAATGTCATTGCCCTTGT 10855 30 93.3 35 ....................G........T ATGATCATGTTCAACGCTGGCGCGGTGCTGCTCGA 10920 30 93.3 38 ....................C........A TCGGGGATCCACGCGGTGTCGAACCGCGGGGATCACTG 10988 30 83.3 35 ........G..T..G.T...G......... ATCGGACTTGATGGGCCAATTGAATGGCAAGGCAC T [10996] 11054 30 86.7 36 ........T.......T...G........A AGCCATTACTGGATGGCCATTCGCGTCCGACAGGTC 11120 30 86.7 36 ........T..C....T...G......... CATGGCGGTTAGACCCGGTCGCAGGTGTCTGCGCTC A [11135] 11187 30 80.0 38 ........T.G.....T..CG..G...... GAGCTGTTCGGCACCTCGGTGCTGGTGATCCCGGCGGT T [11200] 11256 30 90.0 33 ...C...............AC......... AAGGAAAACGAAGCGGCGATCAACAACGCGATC 11319 29 83.3 34 .......GT...T...-............T GTCGATAAGCCGATCACCCGCGATTACGACGGCG 11382 30 86.7 35 ........T....TT...C........... CGACCTTCGCATTTACGAATTACGCCGCGATTATC 11447 30 86.7 37 ..............A.T...GT........ GAGCCGCACGGCGACCCTGCCATCAGCATCTCTAACA T [11461] 11515 30 96.7 33 ................T............. CCGTGCCACACACGCAGATGCGGCCCGACATCG A [11530] 11579 29 86.7 34 A.........-.....T...G......... TTCGTCCCAGTAGTCGATGTGATCGACAATACGA 11642 30 96.7 37 ....................C......... TGCTTCATGACGAGCGGCTTCCCGTTATCGTCCGTCA 11709 29 90.0 0 ........T.......-............T | T [11722] ========== ====== ====== ====== ============================== ====================================== ================== 55 30 92.3 35 GTTTCAGACGAACCCTCGTGAGGTTGAAGC # Left flank : GGAGTGAGTCGGTACTACGACGCGCTCCACGATCAGCGACGGACGGAGTCCCGATCCGATGACCTCGTGGAGGCGTTCGACGAAGCGTGCGGCGAGGCGCTTCGGAACGCGTCGCTGGTTAGTTCGGACTACCCGACGCGGGACTACCTGGTGCTGATCGACGATGTCGAGTCGGAGACGTATTCTCAGTATCGTGAGGAGCGTGACGACGGCCGCTGGAGTCAAGCGCGGGCGTCGTTCCAAGCGCTCAAGCAGACGCTGGTGTCGATCCCCGTTTCGGGGAGCTCGGAGAACGACGCTCCAACGGCGATCACCGTTTCCGAACGGGACGAGAGGTACGATATCGAGACGGGCCGGGGAGTGATCGAGGAAACGGTCCAAACCGATACCGAGGTCTGATCGACCATCGATCCCCCGGGGATACTCGACTATTGAGGGTCGACGAAAACACTCATCTGTGATCGGACGGGTTAGCAGGTATGTGCCCTGAATCGGGCATG # Right flank : TATAGTGCTGATCCTGGGCGCAATCACGCTTGTGGTAGTTACAGACGAACGTTTGTGCGAGTAGGGCGGTTCGCGACGCGTAGCGACCCCATTCCGGGTGCCCCCTTCTCTGCGCGGCGTCTTCGGTTGCTCTCGGTGTGGCGGGTTTTGCGCCGAGGCGTACATCACCTCTCGCCCGCACGCGAGAGACGCGCGTGTCTCTGGCGTCTGTGGCGTGCGGATTGATCAGCGAAACGACCCCCCGACCATCTCGGTCGAGGGGTGGATAATCGTGAGTGCTGTGCGAGGCGGGGGCGGTTCACAGGCGTTTTCACGTCGCCCGGTGTTCGGTCGGGTATGAGTGGACGTGAGACAGATGAATAACGATACGGCGACTGGGCATATTCCCTCGTTCGTGATCGGGATCGCGGGGGGGACGGGCGCCGGGAAGACGACGGTCTCCCGGCTCGTCACCCGCGACCTCGGCGACAGCGTCACCCGGATCCCGTTGGATAACTACT # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGAGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-67] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //