Array 1 75030-76264 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXM01000015.1 Meiothermus granaticius NBRC 107808 sequence15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 75030 35 100.0 41 ................................... TCGCTGTGTAAAGTTGGCGTTCCATTGAATTTGTAGATTGG 75106 35 100.0 40 ................................... TATGCAGCTCAGTAGCAGGGAGCCCATCAAAGCCCCCAAC 75181 35 100.0 42 ................................... TAATGTTTCTACTGCTATAGCTGGAGCTTCTTTATTTGCCGG 75258 35 100.0 37 ................................... TTGGATTGGTGGAGAGATGCCCCACGCCTGGCCACAG 75330 35 100.0 40 ................................... TCCGATGGCGTAGGTGTCCAGGGCCAGCTTCTGGCCGCTG 75405 35 100.0 40 ................................... TAATAGGTTTGGGGCGTGCCATGGATTACCTCCTTTCCAA 75480 35 100.0 41 ................................... TAGAGGGCCGCACCCACGGTTTTGCTCTCCAGCAGCAGCTT 75556 35 100.0 41 ................................... TTTATGCACTAGATGGCGATCCTTTTACCGAGCAAGATCAG 75632 35 100.0 41 ................................... TCACTGAGGTCAGTTTGGGCAAGGTGTATTCGGACAAGGGA 75708 35 100.0 40 ................................... CAGGTGGGAATCCCCATTGTTCTCCCACCACTCCCCAAGT A [75741] 75784 35 100.0 39 ................................... AAGCTCCACTCTTGGTACTCGAGAATACCGGAACTCCCT 75858 35 100.0 41 ................................... TCTAATGGACTTTGCATCGGCAAAAAATGGAAGGAAATCCA 75934 35 100.0 42 ................................... TCTTTTCGCTGAGAACCTTTATTATTCTGCCTTCAGTCTTGA 76011 35 100.0 43 ................................... CAACTTTTCGCTGAGAACCTTTACGACTTTTCCCTCAGTTTTG 76089 33 91.4 39 ...........--........T............. CATCAACCTCAGAACGCCGCCAAACAGACCACCAAAAAA 76161 34 94.3 36 ............-........T............. CACAGATTGCCGCCATCGTGCGGCAACACGAGCAGA 76231 34 88.6 0 .....-...............T...........TC | ========== ====== ====== ====== =================================== =========================================== ================== 17 35 98.5 40 GTCGCAAAAAAAATAGCCCCGCAAGGGGATTGCAA # Left flank : CTCTTGCAAAAAAAGGCCGATCTCACCCAGGATAGCGTCCGCATTTACCCCATTGGGGGCACAGTGGAGGTACTGGGGTTAGGCCGCCTTACTGAGAGCCCCGACTACCTGATTCTCTGAAGCCGCGTTACACTCGCCGTTACCCCACTTTCACGGGCTAAAAAACCCATCGCACAGTCCACGCTCCTTTCTGCGAATATGCCACGAATACCCTGCCCAACGCCCTGGAAGCACTTTGGTCAAACGGCCCATTATGTTTTGCGCAAAATGCTATAGTGCTCACGTTGGAGGTTTCCGACGCGCTTCTTGACAGCAAGTTTGGGCGATGCTTATCGCATCGCACCACCACAAAAAATCCAAAAGTGCAGCTTTGTGAGCCTCCATCGCAATAAACCGCACTTTTTGGAGATTTATCCACAAGCAACCTGTGAATAACTGGCAGTTCTCATAAATACCCCCTTTGAGAGCCCTGTACAGAACAGCACTTAACGGGGTATGCT # Right flank : CGACGACTGGGGGTAACTTGGGTAGGATGGCGGCTGTGGAAGAACCTGGTTTTCGTGTGCTGATCCTTACAGTTGGTCAAACCCGCGAGCCTTTAGAAACAGCGCTGGCCGAGCATACCCCCAACGGCGTCGTGTTTATTGCTAGCCAGAGCAGCCAGGTTACGGTAGCCCCACTATTGCAGGAATATGGTTCCTCTTTGAAACACTATACCCTGCTGATCGAAGACCCTGAGAGCCTGATCGAGAGCTACCAGATTGGACAGCGGGCACTGGCCAAGGCCTTGGAATGGGAGGCCCGGGTAGTGCTGGCTGATCTTACCGGAGGCACTAAACCCATGGTGGCAGGAGTAATGCTGGCCCTCTCAGGGCAGGGCGTAACCTTCAGCTATGTGGGGGGTGAACGCCGCGATAGGCTGGGCAGAGTAGAAAGCGGATATGAGCGGGTGCGGCTGCTCGAGGACCCCAGCGTGCGTTACGGCCTGCGCGAATGGGAAGGCTTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAAAAAAAATAGCCCCGCAAGGGGATTGCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 89803-89478 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXM01000015.1 Meiothermus granaticius NBRC 107808 sequence15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 89802 37 100.0 36 ..................................... GAGCGGTCCCCATTGCCGTCCAAAGAGCGGCCACCG 89729 37 100.0 34 ..................................... TCTACAGCGTGCCTACCAATTATCTTTTCCCCAG 89658 37 100.0 35 ..................................... CAGGCCGCGGCGGGCAATGACCTCGAGGGCATACC 89586 37 100.0 35 ..................................... CTGCGGTAGGGCTTTGCCGGGTTGGGCCATTGATC 89514 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 100.0 35 GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Left flank : CTTGCAGGGCGAACTTGTTCCACAGGTTGTCCCGCCG # Right flank : TGACTTAATTAATTTGGAGCCGAAGGTCGGATTTGAACCGACGACCGCTCGATTACGAATCGAGTGCTCTACCGCTGAGCTACTTCGGCATACTGCCGCAGATGGTTATTCTAGCGGCTCTTTCTGACTACAGCAAGCGTGGTAGGATGCCCGTAATGCGTAAGGATGGTCGGGCGCCCAATGATTTACGCCCTCTCGCAATACGAACCGGTTATGTGAACTATGCCGAGGGCTCGGCCTTGGTGGAGCTGGGCAACACCCGGGTGTTGGTCAATGTTTCTCTTATGGATGGCGTACCGCGCCATGTTTCAGGCCGGGAAGGGTGGCTGATGGCCGAGTATAACCTGCTGCCGCGCTCAACCAAGGAGCGCAAGGAGCGCGAGCGGCAAAAGCTGTCCGGACGTACCGCCGAGATCCAGCGTTTTCTGGGGCGGGCCTTCCGGGCGGCCTTAGACCTTAGCCTGCTGCCTAACAAAACCATCGTGATTGATGCCGATGTC # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : NA //