Array 1 3953849-3953999 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023702.1 Streptomyces nitrosporeus strain ATCC 12769 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3953849 29 100.0 32 ............................. GTCAGCTCCCGGATCCCGCACCCTCCGCTGTG 3953910 29 100.0 32 ............................. TTCCCCGCCGCGGTGACGGTCTCCTCGTCGTA 3953971 29 96.6 0 ........................G.... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : GGGGCTGGTGGGCCGGGGGGAGGGTGTTCAACTGCCGCTTCAGGTGGGGTGGGTGACGTGTCAGGGTCCGGGGGATGAGCATGTCTTCCGGGGTGGTGAGGGGGACACTCATTGCGGGCCTTGCCGTCGTCAGGTGGCCTGGGAGGTCTGGGAGCGGAAGCGGGCCGTCCAGCTGGCGGAAGAGGCGGCGGGCGGGACGGGTGCGGCTGCTTCTGTGCCTTCGCTGCCCGAGCTGTCCGTGAGGCCCGCGGTGGATGACGAGGACGACGTCTATCGGCATGTTCCGTGGCGGGAGCGGGTCGCGGCTGTGGAGGCGCAGCGCGTCGTCAGTACGTGAACGGTGTTCTCGGTGGTGGGGTGAGGGCCTACCCTGGGCCGGGCGGCAAGGGGCGTACCTGGTGGCTTCCCTGTGCCCCCTGGGAGGTAGGTGCGAAATGTCCGAGTCGGTGAAGTTGGTAGAAACCGCTGCTCCCGCCGGATAAACCCGCAGGTCAAATAGA # Right flank : CTGTCTGCTCCTCGTGCCAACGCGTACAGCAGACAGTTGCACGCAATGCCCAGCAGACTCCGCACCTGCCGCAATCCCGCGCAACCGGTCCCCGCGACACCTTCAGGACCAGCATGCTGATGTTCCACCCGTAAGAACGGAGCCCCCTGTGACGCTCAGGTTCCTCGGCACCACATCCGAGCACGGCAACTGCCCCACCCTGTACGAGATCGTTGAAACCGGCGACATCGTCGTCCAGGGCGACCTGCTCACCGATCCCGAGCATCTGGCCCAACTCCGTGATGTGAGTGAACACGAGGGATTCGTCGTGATCCCCCGGGGCCTGCTGACCCGCTTTGCCCCCGAGGAGTGACGTGTCACCGCTGATCCCCTTCGAGGAGACCACTCATCTGTTCACGGACTTCCAGCACACCGCGTTCCGGCTGGAGACCCGCCGCGGGTACGCCACCGACCGGGCCGGAGCCAGGTTCCAGGCGTTCATGCGCGGTATCGACCCGCAG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3960620-3960912 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023702.1 Streptomyces nitrosporeus strain ATCC 12769 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ========================================================== ================== 3960620 27 66.7 58 ...AG....C..A..A....TCAC... AGCCCCTTGACCTGCGACTTCAAGTTGGCGGAGTCTCCGGGGAAATAGCACCTCCGTG 3960705 27 85.2 34 .............ACA......C.... CTGGGTACGGTCGCGAGCTGGCCGGAGGTACGCC 3960766 27 100.0 34 ........................... CCGCCCTCTACGGGCAGTGCGACCTGACCCGCCC 3960827 25 85.2 34 ...........C--..........C.. CCGCCGGCGTCGGCCACACCGCCGGAACCCTGGC 3960886 27 92.6 0 .......................AG.. | ========== ====== ====== ====== =========================== ========================================================== ================== 5 27 85.9 40 CTGCTCCCCGCGCGTGCGGGGATGACC # Left flank : TACAACGCCTGAACCCGAACCCCTGCAGTGCGCCCCGAAGGACATCGCGTCTTCGGGGCGCGCACGGCCGACGACCCGCGACAAGGCGTACTGCTCGAAGGCTGTGCGCATGAGATGCGACGCCGCCGCGTCCAGGCTCTGATCTCCCGCAAGGGCTCCCCGAACATCAAGGGCCTGGGCAAGCTCCGCTAGTCGTCGAGCAGCCCCTCGCCCTGCTCCACCAGCTCAAACGCCTCGCGGTCCGCTGAGAACAACGTATCGAACTCCACGACGCCTTCGTCTCGTTGGGTTGCAGCCTCATCTGCTCCACACGCCTCAAGAAGTCCCGGCCGTGATCGCGTTACGAGCCCCTGAGGGTCTGCCGGAAATTAACCTGTGGGTTTTGCAGCTTGGTTTCGCAGGTCAGCATGTCGCCGGACCGCATGTTGTTCCCCGGCAGACCCTAAGGAGAGCGGCTCCTGACGAACGATCTTCTTCGCGGACTGCCGCCCACGACCAGA # Right flank : CCGAACCCGCAGCACTCCAAGCCTCCATGGACCGTCTGAGCGCTCAAGCCCTTACTGGTCGCCCTTCTGCCCTCGGCCGACTGACGGGCAGGGGCCGGAGGCCCAGTTGTTGCGTTGGTTGTCGGCGAGACGCTCCGCGCGGGTCTCTTGGAGCCAGATGAGGTTCGCCAACACGTCCTCCGGGTCCAGCGCGTTTCCTGGTTGCTGTACGGGTGTAGGAATGGGCTGCTGCTCAGATTCGGTCATGTGCAGGGCCTCTTCTCCGCTGCCTGGTAAACGGCTCGCAGGTCGGCGCCCTCGGCACAGTTCGTCCCGGTGGTTCTGCAAGTCGCACAGCCCTGGATGTGAACGATGTAAGCCCGGTACGCAGCCTCCAGGACAGGAGACGGCGGAGTGGTCATGACGCCACTTCCACGAGGCAGAGAGGGCACCTGCACACCGGGTAGCAACTGGTCGTCTCCACTGTGTCCTGCGGGGCGACCTCGGTTTCCTCGCGCAAC # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.30, 5:-1.5, 6:0.25, 7:-0.32, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3967909-3968486 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023702.1 Streptomyces nitrosporeus strain ATCC 12769 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3967909 29 100.0 32 ............................. CGTCTACCAGCTCGCAGAGAATGTTTCACCAG 3967970 29 100.0 32 ............................. TCCTGACGGCCGCAGTCACCATCACCGCGCCC 3968031 29 100.0 32 ............................. ATCGAGTTGAGCTGGTCGCGGATCTCGGTGTT 3968092 29 100.0 32 ............................. CCGTCCGCAATCAGGGCTTTGACCGCCTTGGA 3968153 29 100.0 32 ............................. TACATGGCCCTGACCGGCGGCAAGCTCACCAT 3968214 29 100.0 32 ............................. GGCGCGAAGTCCGCCCACTACTGCTGGACGGA 3968275 29 100.0 32 ............................. GGCGGTGGCAGCAGAGGCAAGTACCGGGCCGA 3968336 29 100.0 32 ............................. GACCCGGCCGCGTCGGTCACCGTGCGCTACCG 3968397 29 100.0 33 ............................. CAGCGTGTGTCGCAGCTGGCGCGTGAGGACCCG 3968459 28 93.1 0 ......................-C..... | ========== ====== ====== ====== ============================= ================================= ================== 10 29 99.3 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : GGCCGGGGAGGGGGTGCTCGGTTGCCGCTTCAGGCGGGGTGGGTGACGTGTCAGGGTCCGGGGGATGAGCATGTCTTCCGGGGCGGTGAGGGGGACACCCACTGCGGGCCTTGCCGTCGTCAGGTGGCCTGGGAGGTCTGGGAGCGGAAGCGGGCCGCGCAGTTGGCGGAAGAGGCGGCGGGCGGGACGGGTGCGGCTGTTCCTGCGCCTTCGCTGTCCGGGCCGCCGGGGCTGTCTGTGGGGCCTGTGGTGGATGACGATGATGATGTCTATCGGCATGTTCCGTGGCGGGAGCGGGTCGCGGCTGTGGAGGCGCAGCGCGTCGTCAGTACGTGAACGGTGTTCTCGGTGGTGGGGTGAGGGCCTACCCTGGGCCGGGCGGCAAGGGGGTGTGCTTGGCGGCTTCCCCGTGCCCCCTGGGAGGTAGGTGCGAAATGTCCGAGTCGGTGAAGTTGGTAGAAACCGCTGCTCCCGCCGGATAAACCCGCAGGTCAAATAGA # Right flank : CAGGCGGCCGGGCCGCGCCAGGCCCGCCCCGCTCGCGTTTCGCCCTGCCTCGCCCGCCCCGCCCCGCCCCGCCCCGCGACCCGCACCCGGCCCGGCCCGGCCCGCACCCGGCCCGCCCCGCTCCCGGCGTGGGATGGCTCCTACCTCCCCTCCACCCGGGCGGCATAGGGTGATCGCATCGGCGCGCGGCCGATCGCCGTGCGCAGCCGCGGCACTCATGTGGTCACTGCTTCGGCGGCGGGGAGACGCACGGAACTGGTCGCCGCGGGCCACTTCACGTGAGCGGAGGCGGATGTGTTGATCACTGTTGCGGACGTGGAAGCCGCGGCCGAGCGGATCGCCGGGCATGTCGTACGGACCCCGACGGTGCCGAGTTCCGGGCTGTCGGCGTTCCTGGGCGCGGATGTCACCGTGAAACTGGAACTCCTCCAGCGCACCGGTTCCTTCAAGGCGCGGGGTGCGACGGCGAAGCTGCTCGCGCTCGGCGAGGACGAGCGGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //