Array 1 1710-690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNJS010000063.1 Phocaeicola vulgatus strain 1001283B150304_161114_D8 NODE_63_length_16441_cov_36.8043, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1709 33 97.0 35 ................................T CGAAGTTTATACAGCATAATGACATGGTCTTTATA 1641 33 100.0 31 ................................. ATTATGCCGGTGAATCCTTGGAGATTAAATT 1577 33 97.0 32 ................................T CAGCATGTTTGCAGGTGCTGTTTTCGGGAAGA 1512 33 97.0 31 ................................T CCTGTGCCAGACTTTCCAAACTTCTGCCTGT 1448 33 97.0 33 ................................C GGAACGTGATAGAGTTTACCGATATAAACTATA 1382 33 100.0 33 ................................. CGCGGATTACGGGAATTAACTGCGGCAAGTGTC 1316 33 100.0 35 ................................. TCCATACTACAACAGAGAGTAAACCTGCCACTCCT 1248 33 97.0 32 ................................T GACGGATTGAGCGTGTTTATAACTTATAATGA 1183 33 100.0 33 ................................. AATTTGAGGAATCAGATAAAGATGTTGATTCTT 1117 33 100.0 32 ................................. CACAGCGGACGAGGCTGTATGACCTCTATGAG 1052 33 97.0 33 ................................C TGAGCCAGCATCTCTCATAGCCCTCCTTCCAGA 986 33 100.0 32 ................................. TGTACAAAGGGATAGTAGAAAATAGAAGTTAT 921 33 97.0 34 ................................T TTATAATAGGTTTCATGAATGTTCGGCATTTTGG 854 33 100.0 31 ................................. TATTCTGAACACATTGCAAATGTACAAAAAG 790 33 100.0 33 ................................. ATGACGAGGTGAATACGTGTATAGACAACCATA 724 33 93.9 0 ....................A.........G.. | TA [701] ========== ====== ====== ====== ================================= =================================== ================== 16 33 98.3 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAAATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //