Array 1 70471-69304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVP010000010.1 Serratia ureilytica strain SCPM-O-B-9133 (B-451-16) 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 70470 28 100.0 32 ............................ TTAATTTCCTCCAGCCGGGTCAAGCGGCTTTC 70410 28 100.0 32 ............................ AGTCCGGCACGGTCGTGTAGTTCCCGCAGATA 70350 28 100.0 32 ............................ ACCAGAAACATCATTACGCTCTTCATTGCCGC 70290 28 100.0 32 ............................ GGTACAGTCGTTTTTGATGCTGCTGCAGCGTC 70230 28 100.0 32 ............................ CCGTATACGCGCTATGGTGCTGGGTTTGTGCA 70170 28 100.0 32 ............................ TGTCGTGGTGCAACATCGCGCGCGGCGTCCGC 70110 28 100.0 32 ............................ AAGAAAACGTCCCTTTTGTTAGATTCCGGTAT 70050 28 100.0 32 ............................ TTCAGCTTATGTTCGTTTTCTTCAGTAATAAC 69990 28 100.0 32 ............................ TTATGTCACAAGTTAAATGTGAGTTAGATGAA 69930 28 100.0 32 ............................ TTTCGACACCCTATCCCGTCCAATCATCATGA 69870 28 100.0 32 ............................ AGCATAGCCGGCGAGTTCACCGTGAAACGCCT 69810 28 100.0 32 ............................ TGAATTACTGGCGTGATCGCAGAGAAGGAAAG 69750 28 96.4 32 ............A............... ACAAAGCGATCGACAATGCCCGCGACGGCTAC 69690 28 96.4 32 ............A............... GCTGGGCGCATGGTCACGGTGATGAATGGTGT 69630 28 96.4 32 ............A............... AATGATTTAAACAGTAACGTCAGTCAAATCGT 69570 28 96.4 32 ............A............... GTGGGTGGCTAACTGGGAGCAGGAGCTGAACC 69510 28 96.4 32 ............A............... TGAAAGCGTTGATAACTTTTTCGGGGCGAAAA 69450 28 96.4 32 ............A............... CGAAAGCGTACCAGCAAATCCTGGCTGGGTTT 69390 28 96.4 32 ............A............... CTATCAGGCTGACATGCTCGGGCGTACAATGG 69330 27 82.1 0 ............CC......T..-...T | ========== ====== ====== ====== ============================ ================================ ================== 20 28 97.8 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : TGCGCTGACGGCGCTGGGGGGATTCGACTGGCTTAAAGGACTGCGGGACTATACCGACCTATCGCCCATCCAGGCCGTACCTGCTGAGACGGCGTTTCGTACGGTCAGCAGAGTTCAGGTAAAGAGTAGCGTAGAGCGTATACGCCGCCGGGCCGTCAATAAAGGTTGGCTGACTGAAGAACAGGCATGGGAAAGAATACCGATGGCGAACGAGCAGCGAACCTCATTGCCCTTTATTGCCTTGAAAAGTCTTTCCACCGGACAACATTTTCGCTTGTTCGTAAAACTGGGCCAATTACAGGAAAAACCAACGCCGGGCGTTTTTAGTTTCTATGGGTTGAGCGCGTCCGCTACGGTGCCTTGGTTTTAACCCTTTTTTTTCGTTCAGAGGTAACGCATTGATTTTGTTGCCTCTGAACGGTATCTGAAAAATTAGGGTTAAACCGAGGTCTTTGCCTGTTGTTCTTTAATAATCAGATCGTTAGTGAATTTTTTGTTCT # Right flank : AGTAGGGATAAAACTTTACCGACACCTGTTAACCAGTAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAGCGTCAGCTCCCCTTTACCACGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATGTAGAGGTGCCAGGGAGTGGGGGTAGTGTCGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCGTCACAATCCCATCCCCGGCCGCCGGAGCCTTACCGCTTTACCCCTTTTTTCCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 79937-78947 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVP010000010.1 Serratia ureilytica strain SCPM-O-B-9133 (B-451-16) 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 79936 28 100.0 32 ............................ TTCCCCGAGCCAAGGCGCTGACTCAATTTGTT 79876 28 100.0 32 ............................ GTGTACCGGCGTCGCCGACGAATCGACAACAA 79816 28 100.0 32 ............................ TTCTCATTTTTACCCTGTGCCTGCTGACTGCC 79756 28 100.0 32 ............................ ACTTGCCTTTGGATGCCGCAGCAAGTCGCTGG 79696 28 100.0 33 ............................ TTAAATACTGACTGACAGTTGATTGCGTTTCGA 79635 28 100.0 32 ............................ TTTTCGACCATGTTCACGGTATCGACTTCGAT 79575 28 100.0 32 ............................ TGGATGAATCGCGGGGAGCCGGCCAAGCTGCT 79515 28 100.0 32 ............................ AGCAAAACACCGCCGCAAACGTTACGGGAACG 79455 28 100.0 32 ............................ AGTCAGTTCCTGAAACGCGTCCGCCGTCATGC 79395 28 100.0 32 ............................ AAGCTGATGGAAGCGATTGAGTACATCGGCAA 79335 28 100.0 32 ............................ TTTTCGCTTTCCGGCTCTTTCAGGGATGACGG 79275 28 100.0 32 ............................ TTAACGACAAGACCGGCCGTCAACTGTCATTG 79215 28 96.4 32 .............T.............. TATCTCGTTCAACGGCCTGGCGAAGACGTTCC 79155 28 89.3 32 ..T........C.T.............. ACTGGGCACGGGACTACAGCAATAGACGGTTA 79095 28 96.4 32 ..T......................... AGCGTGACGCGCTCAACGCTGACGGCATCGCT 79035 28 100.0 30 ............................ TTCGTAGCGGTTTTGACGTTGACGTTCTGT 78977 28 96.4 0 ....................A....... | G,A,A [78950,78954,78956] ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATCCGGCCTATTACGGCCGCTTCGGTTTCAAACCGGCCGCCGCCTATGGCCTGAATTGTCGCTGGCCGGATACGGAAAGCGCATTCCAGGTGTATCCGCTGGCGCAAGACGCTCTGAATGGCGTCAGCGGCGAAGTGGCGTTTTCGGCGCCGTTTAATCGCTTTTAACGACCGGCAATAGAGACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCCCAGCTGTTTGAGTGAACAATTCAGTTCATCTGTCGTGTCTATGCGTCGCAGTGAGACGGATGGTGATACCAAACAGGAGCCTATAATTCCCCCCTAAAATGTAGAAATGTCACCTTACTCCATTCTTGGTTGCCGAACCCTTTTTTGAATGCTTTCCATAATTCATTGATTATAAATAATATTCATAGGCATTTTAAAAAAGGCTTTTTTAAAAGATATGCCGATTTTCTTCCAACAATCAGCTGATTAGCGCTAAGATTCAACG # Right flank : AAGTAATATGTATTTGGCACATTCCGGCAGTGATCAATAAGTGGATGATTTTATTTGTCCGATTGATGGATATTGACTCGCTTGCAACGGATTTCCCTGTAAAAACGTGGTAGAACGTTGGTGTCGCCTGCATCGATATGCATTACATGTTATTTATTTTAATTGTAATTATTTCATTATGGATAAGAAATATAACAATGAAAAATGTCCTCTCCTCCTCTGAATTAAAAACAATACTGCACTCGAAACGAGCAAACTTGTATTACCTGCAATATTGCCGAGTTTTAGTGAATGGCGGCCGCGTCGAATATGTCACGGATGAAGGAAAACAGTCCCTGTACTGGAATATCCCCATTGCCAACACCACCGCCATCATGTTGGGAACCGGAACCTCGGTCACGCAGGCTGCAATGCGTGAATTTGCTCGCGCCGGGGTTTTAGTCGGATTCTGTGGCGGCGGCGGGACACCCCTATTTGCTGCCAACGAAGTGGAAGTCGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //