Array 1 1553108-1555188 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018095.1 Chelatococcus daeguensis strain TAD1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1553108 32 100.0 33 ................................ CCCGGGATCAGGCCGCCAAATTCAACGGCAACC 1553173 32 100.0 35 ................................ CTTCGAGCGCAATGGACGGCCCAACGGGCCGGAGG 1553240 32 100.0 34 ................................ ATCACGTCCGTGAGGCCGGCGAATGCCGTCTGCT 1553306 32 100.0 34 ................................ TCTTTCACAGTCGAGGTGACGCCGTTTGTCCCGC 1553372 32 100.0 34 ................................ CAGCACCTGCGGCAAGCGATCATCAATGCCGCGG 1553438 32 100.0 33 ................................ TCATTCGAGAGGTGCCGGCATGGCCAATCTCAA 1553503 32 100.0 34 ................................ TCCGATGTGGCCACGACATGCGCTGCCGTGACGA 1553569 32 100.0 35 ................................ ATTTCGGCGGCCGATGCAGTTGGCTCGAACCCGCG 1553636 32 100.0 34 ................................ TGCAGCGATTGATCAAGGTCCTCCCGGAAGGCCG 1553702 32 100.0 34 ................................ GCCGGCGAGCTTCTCGGTGAGAGTCGCGGCCTTG 1553768 32 100.0 34 ................................ GCGATCAGCCGACGTTTGATGCGCGTGTCCCGTT 1553834 32 100.0 35 ................................ TTCTCGCCGGTGGCGAGCGACAAGCGAGCCAGCCG 1553901 32 100.0 34 ................................ TGCGCCAAAAGTTGCTCGACGCCGGATCGCCTTA 1553967 32 100.0 35 ................................ CATCCATTTGCTGAAATCGATGTCGCTGGGACGAG 1554034 32 100.0 33 ................................ CTTGTGCGGGTGGAGGGTGAGCCGATCGGCCTT 1554099 32 100.0 34 ................................ GTTTTGCACGTGATTCAGGGATGCCCACCACAAG 1554165 32 100.0 33 ................................ CACTCTTGCTTGCCGATGGCCTTGCGAGCCTGA 1554230 32 100.0 34 ................................ TGGCGATAGCGCTCGATCGCCTGGGGATGCAGCG 1554296 32 100.0 35 ................................ ACCCAGACCGTCAAGGTGGTCGAGCTCGGCGAGAT 1554363 32 100.0 35 ................................ CTCCGCAAGGTCTGGAAGCAGGCTTCGACCCAGCG 1554430 32 100.0 34 ................................ GGCATCGTGCAGTTCAAGTCCGTCGAGCCGGGCA 1554496 32 100.0 35 ................................ CGATATCGGGCGTTTCTCCGCAGGCGGGCCGCCGG 1554563 32 100.0 34 ................................ ACTCATGCCGGTCGAGGCCAGAAATGAATCGATC 1554629 32 100.0 34 ................................ GTCAACAGCATGTCCGACCTCTTCCACGAGGTCG 1554695 32 100.0 35 ................................ TGAGCGAGCGTCCTGCAACTCGCTCACCAAGTCAG 1554762 32 100.0 35 ................................ CGCAGCCAGACATGCGCGTTGCCGTTGGCCGTGGC 1554829 32 100.0 33 ................................ GCCCTTGCCTGCTCGCAGGCTCGGCAGACCATC 1554894 32 100.0 34 ................................ CTGAAGACGCGCGCCTCGCTGTTACGCCGGTACT 1554960 32 100.0 33 ................................ CCGTTTGCCGTCGGCGTGGCCGCCTATCTGGTG 1555025 32 100.0 34 ................................ TCCGATCGATCCTTCTCGGAGGCATGGGATACAG 1555091 32 100.0 34 ................................ TCGGCGCTCGCGACCGGCGCCTATGAGGTCGCAT 1555157 32 93.8 0 .........................CG..... | ========== ====== ====== ====== ================================ =================================== ================== 32 32 99.8 34 GTCGCTCCCCGTGCGGGGGCGCGGATTGAAAC # Left flank : CATGCGAGGGCGAGGCGGGGGGCGCGGCCGGAAACCCGGGCGGGTTCGGACCCGGCGCAGGAACACCAGATCGCAGCCCTGCCCCACCTGTTTGACGGTGGCGGCACGCGGCGATAGCCCGCAGCGCGATCGGACGGATAGAACCCACGGCGCGAATGGCGGCCGCCCGATCTCAACCCCGGCCGGCGGCTTGCGCGATCATAACATGGCGTGCGTCTGCGTCGGGTGCAGGCGGGGGCAGGGCCGATGACCGGCCGACAGTGCCGCGTTGGCCCGGCCGAGACGCCACCCGCAACCGCAGCACGACCAACTGCGCGTCGGAAGCGCGAACCCCAAGCATGCCGAAAAAACCGGCCCTGTTCGCGCACTCCCTGGCTCCTTGACATCGTTGAAACATCATCGTCACGCAGAAAACGCTTCGCTCTCCTGGGCAGCGGCACGACGCGGTTCGCGCTTCCGGCTCTATTTTGCTTGTTCCTGCAATCGGCTAAGAAGAGGCG # Right flank : CTCGCGGCGGTGCCGGCACTCGCGCCGGTGCTTATTGCCTTGCTATCGCCGCGACCCCGCGCGAGCCTTCACGGGCGGTGGGCTGGCCTTCAATACGTTGATTTTCCTTGATTTCCGCGGAGACGAGGGGATTCGAACCCCTGATACGTGTTACCACGTATAACGGTTTAGCAAACCGCCGCCTTCAGCCACTCGGCCACGTCTCCTGCGGCGGCCAAGCCCTAACCTTTTCGCGGATTCCGGTCAACATGCCAGTTGGGTCATGCACCGCCACTTTGGGCCGCGACCAGCCTGCTTTCTCGGTGAGGGGCGGGGAGTGCGCGTGGCCGAAGGGATGCTGCAGCGCAGCGGCATGCGTGGGCGCGGAGCCAAATGACATGATGATTCCGTTGTTTGCGCCCTGCTGCATTGCGTGTATGGCAAAAGAGCTTTGCGCTGTTTGAGGGGGCCTGCATGAAGATCAAGCGCCTGTTGGTTGCCAACCGCTCCGAGATCGCCAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2373582-2372284 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018095.1 Chelatococcus daeguensis strain TAD1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2373581 32 100.0 34 ................................ TCGGTGTGGCTGTGGCTGTTCTGGCCCGGCTCCG 2373515 32 100.0 34 ................................ GAGCGGATCATATCGTAATAGGTGCGCAACTCCA 2373449 32 100.0 34 ................................ ATCACGTCCGTGAGGCCGGCGAATGCCGTCTGCT 2373383 32 100.0 34 ................................ ACGTGTGCAGGAGGTGGCTGAAATCACGGCCGCG 2373317 32 100.0 34 ................................ CGGAAACGCGCGTGTCTGACGTTCTGGCGACCAT 2373251 32 100.0 34 ................................ CTCCGCGACCTTCGCCTTCCAGTCCTCGTCCACC 2373185 32 100.0 35 ................................ GGCAAGGCCGCCGATCTGCTTAAGGCGCAGCACCT 2373118 32 100.0 35 ................................ CGGTGGACAGGTCACGAGGCTGCTGAAGGCCGTCT 2373051 32 100.0 35 ................................ TGGCAATGCATTGCGGATGGCTTCGCCGCTGCTAT 2372984 32 100.0 35 ................................ CAGAACGGCTTGTGATGTAAATCCAGGCGGTGCGG 2372917 32 100.0 35 ................................ GCCAACAGCGAAGGCGAGACCAATACGCCTGTCCG 2372850 32 100.0 35 ................................ AAAGACATACGAGGGGGCGATGAAAAAAGTGATGG 2372783 32 100.0 33 ................................ GTTGACGTGATCGAGGTGTATGGAGCGGAGTTT 2372718 32 100.0 35 ................................ GATATGAAGCCGGGCGGCGTGCGCAGGAGCGTCGA 2372651 32 100.0 35 ................................ CTCTCCAACGCCCGCGCTTTCGCCGAGCATGTTGG 2372584 32 100.0 35 ................................ ATTTCGGCGGCCGATGCAGTGGGCTCGAACCCGCG 2372517 32 100.0 36 ................................ TCCATCTGCGCTGCTCTGCGGCGCATGGGTGCGATC 2372449 32 100.0 35 ................................ CTGCAGTCGGTGCACCGGCTGCAGCGGTATGGGCA 2372382 32 100.0 35 ................................ GTGCTCGATACCGAGTATGCGGCCATCGGCCTGCT 2372315 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 100.0 35 GTCGCTCCCTACGCGGGGGCGCGGATTGAAAC # Left flank : CCTATGACGTAAACACCTCCGAAGCGGGCGGGGCAGGGCGGCTCCGGCGCGTGGCACGCGCTTGTCGGGATTTCGGCCAGCGGGTCCAATATTCCGTCTTCGAGATCCAGGTCGACCCGGCGCAGTGGACGTTGCTGAAGGCGCGCCTTGAGAAACTCATCGAGCCCGAACGCGACAGCCTGCGCTTTTACTATCTCGGAGCCCATTGGCGCCGACGTGTCGAGCATGTGGGGGCGAAGCCGACCCCCGACCTCGATGGGCCCCTGATCGTCTAGCCGAGCGGGCTTATTCGCAGCCGCGTGCAGCGGCGCCGCCTGTGCGGTGCGAACCGCAAGCGTGCCGGCAAAACCCGTCCCGTTCGCGCAGGCGTCAATTCTCTGACATCGTTGATCTTCTGTTCCGGCGGAAGAAAGATTGCGGGTCGATCTGCCCGGACCGGAATGGGATACGCGATCAACGTTCGCTTTCGCGTGCTATCGCAATTGGATAACAATGAGGGA # Right flank : CGGCTGCAGTCGTGGTCGAACACGATCATCGGGCTCGGCGCAGCGGTGTTGCGGCGGGCTCTCGGCGGATGCGGGCCGCCTGTGCCGTGCGAAGCGTTCGGGGCGCTCTCGCCCCCGATGATGTTGCTCCCGCGGTCAATTCGCTCTGTTGTGGCGTCAGACGCCGTCTTCCCCGTCGTCAATCGGCACGAGGAAGAGCACATCAAGGCCCTCCTCCTCGCCGTCTAGGGGTTCGTCCTCGTCGAATGCCTCCGCGTCCTCCTCCATCATGAGGTCGAAGGTCTCGGCTTCCTCCTCGCTTGCCGGGCGCAGGCTGAGCGGCATGATGCCGTCCCACAGAGGCTCGCCATCGCTCGTCATCTGTCTGAGGTCGTTCCTGAAGGCCTCCTGATCGAAGACGGCGCGGGCCTGTTCCTCGTCGGCGTCGATCACGGCGACAGCCTTGCGGCCGATTTCCAGTGTATACATGTGAGGTCCTTCATCTCGGGAAGCGGCGCGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //