Array 1 28926-27436 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUKD01000006.1 Klebsiella pneumoniae strain 1203020 NODE_6_length_209571_cov_25.2981, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28925 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 28864 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 28803 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 28742 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 28681 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 28620 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 28559 29 100.0 32 ............................. CTGACAGCTGGCGCTAACCCGTCGTTTATCGC 28498 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 28437 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 28376 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 28315 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 28254 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 28193 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 28132 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 28071 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 28010 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 27949 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 27888 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 27827 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 27766 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 27705 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 27644 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 27583 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 27522 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 27464 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //