Array 1 127-603 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000088.1 Anabaena minutissima FACHB-250 contig88, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 127 37 100.0 33 ..................................... AAGTTACGTGCTGCCCACTCCTTAGAGCGTTGG 197 37 100.0 38 ..................................... AGAATATTACTTTTAAATTACTTCTTGTTTATCTTCCG 272 37 100.0 34 ..................................... TTAACTGATTAGATGTTTCAAATTCACTACTCAA 343 37 100.0 36 ..................................... AATCAACTCGATATATTTCATCTTGCTGAGGTGATT 416 37 100.0 37 ..................................... CCGTTGAGTAACAACTCAGCTATCCCAGTCCCGCCGG 490 37 100.0 40 ..................................... TTGACTTGCCACACCCATTTACACCTTCAAATACTATGAG 567 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 7 37 100.0 36 GTTTCCACAAACCATTACCCCGCAAGGGGACTGAAAC # Left flank : CACGTCTTCCGAAACTACTCAAATGATAAAAGTCCCTCGTCTTTTATTTGAGCGTTTGAGGGATATTGCTGTTTACGCTGCCTGAGTAAATCAAAAATGGATAAAGTCGAGCTAATCTCATACTGAG # Right flank : CTAATCGAAAAATGATAGAAAATTCTCTTTGGATTACTTGTTACGGAACAAATCCTTTGTGAGAAGGAGCGATCGCCCAAATCCCCAAGACCTATCAGAAAAATTCCCCATAGGGGGATGAAATCGCCTAAAATATTGAACATTATTTGAGTCAGTCAAGCGATGCCAAGAGCAGCCACAACACCCAAACGCAAGCCTAGAGCTAAATCAGTGCCAACATCTTCAGTCCCGACATGGGCAGATGAGACAGAATTGGTAGGCTTGGTGTTTGAACTGGAGGCAACTGACTCAGCTTCTCTCTACTCACAGTACACAATCGGACTTCACGCATGGTTTCTTGACCAAGTGCGACAAGCAGACCCAGAACTTTCAGCGTATCTCCATGATGGCGAGTCAGAAAAACCCTTTAATATTTCAGCATTACAAGGGCAATTGCTGCCTAGTGGTAAGCAACTGAAATTAGAAGCCAACGAAACGTACCAGTGGCACATCAATGCACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACAAACCATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 5542-2177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000088.1 Anabaena minutissima FACHB-250 contig88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 5541 37 100.0 38 ..................................... ATGTATATGTGCATCCAGCTTTAACCATGTTTCTGCTA 5466 37 100.0 34 ..................................... CTAGAGCTATTAGAGCTAGTATTTGATCTTCGTT 5395 37 100.0 36 ..................................... TCAGCAAAAGAGCGATCGCTGATGAATGATTTATTT 5322 37 100.0 38 ..................................... CTCACTTTCCTGTAATTGCGACGTTGATAAGATTGGTT 5247 37 100.0 35 ..................................... ATTGTAAAACTACAAAGATTGCATTTACTTGGCAT 5175 37 100.0 39 ..................................... TACTACAGGAGCGCAGATCATACAAGATGTTATTACAGA 5099 37 100.0 35 ..................................... GTGGTGGTAAGCTCTTCTGTGGTTGCGGTGGTTGT 5027 37 100.0 36 ..................................... CTCAATCCTGAAAATTCTAGATGATGGTGAATGGCA 4954 37 100.0 37 ..................................... TTGAACGGATTAATCAGACAGTGCGGGGGAGATATCC 4880 37 100.0 38 ..................................... TTTATGTAAAGCTGTATCCTATAAGGCATTCCTTAGTT 4805 37 100.0 36 ..................................... GAAATAGCTAAAACTTTAATAAATAACGGAATACAA 4732 37 100.0 36 ..................................... TAAGCGTAATGATGCCCTTTTGTGTCTTCACACAAG 4659 37 100.0 37 ..................................... TATTTAATAGCTACGGCAGGCACGAAGTCTTGCACAG 4585 37 100.0 40 ..................................... TCTGGGAAAGATGAAAACGGCGAGAAGGTTTACTTTCATC 4508 37 100.0 37 ..................................... TAGTGTAGAGATACAGCAAACGTTCAATATGTTGATG 4434 37 100.0 35 ..................................... TCTATAGCGGTCTTACGGGTAATAGCCAATGTGAT 4362 37 100.0 40 ..................................... CATAGCAATTTTTGCAGCGATCGCGTCTGTTGCAATTAAT 4285 37 100.0 39 ..................................... AAGAGAATCTTTCTGTAGATAAATTAGAGTATCATGGGC 4209 37 100.0 36 ..................................... TTGTAGTAGTAGTAGTAGTGATTGTAGCGGTAGTAT 4136 37 100.0 36 ..................................... ATCTGCGGGTACGCCGAAGACGGTCAAGATGTCCGT 4063 37 100.0 40 ..................................... TTCCCTGTCAGTCGCCACCTGTCCCAGTAGCGATCGCACA 3986 37 100.0 38 ..................................... ACCTGAAGCTCCAAAAGAAGCTAGTGGGCAGATGCAAA 3911 37 100.0 37 ..................................... TTAAGCTGGTAGATTCAGCTATCAAATCCGCAAATGG 3837 37 100.0 38 ..................................... TCCAGGATACCTTTTATGTGAGGCAACCCCCAATGTAT 3762 37 100.0 36 ..................................... CTGTCTGCTGTTTCAAGGTCTTCAGCACCAATTAAA 3689 37 100.0 34 ..................................... CTCATAGCTTTAGGTGTAAAGATATGGATGAATC 3618 37 100.0 34 ..................................... TTGTACTCATTAAATAGCCTATATCCCAAATCTT 3547 37 100.0 40 ..................................... TGACAAGTGCTGGTGGTTGGTATGGCGCATCTCAAGGTAG 3470 37 100.0 37 ..................................... TCTATGCTCTAATGCTCTTAATACGTGATATTCTGAA 3396 37 100.0 36 ..................................... GTAAGAAGCTGAATTTTCTGATTATAGCAAAATCTG 3323 37 100.0 37 ..................................... ATAATTTACTCTTTGCCAAGAGTTAGAATAATTTGAA 3249 37 100.0 36 ..................................... TTGTAACGACCCGTCTAGGTTTGAATCTCTATTTAA 3176 37 100.0 39 ..................................... TCCCGTTGGGGCTATTTATGAACCTCCAGACGGTTGCCC 3100 37 100.0 36 ..................................... ATAACATATCTTAGAACCATCAGGCTTGTCTATCCT 3027 37 100.0 34 ..................................... TAAATCAGATGATGATGTAGACTTTCTTTGCAAA 2956 37 100.0 37 ..................................... TCCGATGTTGTAATTTTGGTACAATATTTTTTGATTT 2882 37 100.0 36 ..................................... TATACGTAAGGAAGGTTATTTCAAAACCATTTTTAA 2809 37 100.0 38 ..................................... GTTCTTTGTTTCTCATATCTACAGTTACTGCAATGTTG 2734 37 97.3 36 ..........T.......................... TCAATCAATCAAAATTGACTCACGTGTTGTAGATGC 2661 37 100.0 37 ..................................... TTATAGCTATCTCTTTAGTACCTAGTCTATGCTTAAA 2587 37 100.0 36 ..................................... TTAACAGGTCAGTGTGATGCTTGGAATCTTCTAGGC 2514 37 100.0 41 ..................................... TCCCGTACCCTTGGTTAAATCCCTGGGGATTTGGTTGGTAA 2436 37 100.0 38 ..................................... GGATGCCAAAGGAGTCCCCCCAGGGCTGCCTGTGGCTG 2361 37 100.0 35 ..................................... GTTAAAAGTCAAGTCACGGGAGGTACTCAGGTATG 2289 37 100.0 39 ..................................... TACAAATATACTACAGTTAATAAACAATTATTAAAATAT 2213 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 46 37 99.9 37 GTTTCAGTCCCCTTGCGGGGTAATAGTCAATGGAAAC # Left flank : GTTGACCATCAAGCAACAGCTTTACTGTAGCTGCTACCAGTTTCACATCACCACGATTATGCTTAGTTGCTTGTTCAGTTTTTGTCTCCCAAACCAATAAACTGCCAATAGGATGTTTACGGTAAAGCGAACTCATCAATCCTCGTACTTGATCCCGATTCCAAACGTAACCTCGTTGAAACTCCGGTAAGGCAATACTGCCCAAATCAATCTGGTCAAGTATAGTAGTAATGTTCACAATTTCAGTTTTCTCCACACAGAATATTTTTTAATTTTTCCCGTAGTAGAGGCTTATCTAACAGTTTGCTAGTAAATCGAATCTTGGTACAAGGTTTAACACCAACACGGCTGGTATCAATCCAGTAGCCATCTCTTGCATAGCGTGTGACAAGCTTTGGCATCTGCAAGGGAGTCGCGGATGCCATCTAGGATGCGGTAATACTTGGGGTTGCCCTTGAAATAGCCAGTAGGTCAGCACTCAACACACCTCCAGCTAATGC # Right flank : CCCCGGTGCTGAAACTGTTACGGGGTAAGCTTCCTGGGAAGCATTTTGACGGGTCGGAAATTTTGGTCATTTCCAGCCCCTCTTATTGCAAATATTTTGCAACTTCCCTAATTCTCAAAACACTGTAATTATTATATTGTCTAGGTTCTGGCGATTTTGACGAGTCCCCAGGGTTTTTGCCCCCACTTCGACTTGTCAACTATCAAGCTGATTTTATTATCATATGATTATTTTTTGCTCTTGTCGATAGCTTGATTCGCTGATGTGCTTACTTGATCTGGCTTTAAGGCTTTCCGTGCTAATTTTACATAAGTTTTTACAGTAGACTCACGCATCTCTAAATCATCGGCGATCGCCTTGAGTGATTCTCCCATTTCTCGGCGAGCCAAAACTGTTGCCCATGTGGCGGCTATTTTATCAGTGCGATCACCTCCCTTGCGTTTACGCTGTGCTGTAAATAGGTCTGTCAATTCTTCGATCCGCTCCGCCAACAAATTCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCCTTGCGGGGTAATAGTCAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 231346-230886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000001.1 Anabaena minutissima FACHB-250 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 231345 36 100.0 34 .................................... TTCTTTTAATTTGGCAATATCCCTTTCATAGGGG 231275 36 100.0 35 .................................... GGTTACATTCACTTCGACATATGCAAATCCTCCAG 231204 36 97.2 34 ...T................................ TTCATTAGTGTGCGATTTAGAGGATAAAGTAAAT 231134 36 97.2 35 ....................A............... ACTCTAGATACCGCATCTAGCAGCACTCAATTTCA 231063 36 100.0 35 .................................... GTGACAGTGACGGTGGTGTAACTAAGCGAATGTTC 230992 36 100.0 35 .................................... CACTCCTCTGCTAAGTTCGCTGACCAACGAACACG 230921 36 91.7 0 .........................A......A..A | ========== ====== ====== ====== ==================================== =================================== ================== 7 36 98.0 35 GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAG # Left flank : TAGGCGAAAGTAGGGATTTAGTGAATGATGTTACCCTTTTACCTGAAAATTATCGTGCAGAATCAATGCGATGGTTAATTCGAGATGAATATGGGTTACTAACTTTACCTTACTGGGTAGACCATGTAGGTTCACGGGGAACGCGATGGCTGTGTTATGAAGTTCAGGAATGTCAAGTATTTCAACCACCTGAATTATCTTGGACTTTAATTCAAAGTGATTAGAGGGCATTATTTACTTTCGCAAGCATCTTTGCTTGGGCAATTTAAATGCCACAAGAAATAACCTTGTCGTCTTGTTTCACAAGCATTTTAGGGATTTTACATACTGTCAATGTGCTTGCAATTCCCAGGAACACCTTCAACACAAGGGTTAGAGCTTTAGCAACTTTGCTTCTGCTATGGATAGCTATTAATTTTTACAACTTGACTAATTCTTATTGGAAGGTGCTTGTAAAATTGGTATAGAGCTTTGGCCAGTCAACAGGTTTGGCGATCGCC # Right flank : CACTATACTTTGTAGACTTCAAGACAAAATTAGCCCTCTTGAGTCTCATCTTTGCAAGAAACTTTAGAGAGAATTTTTTCCCACTGCTCAATCTGGTTTTGTAGTTTTAATTGCCGATGGGCTTCGCCCCGCCGTAGGCGATCGCTCAAATCTTTATTATCATCAACAGACAAATCCTCACCACTTAATCGCTCACGGTAAAGAGCAATCAGTTCGGTTAAGGCTTTTTTATGGCTTGCTGATCCTCCTGGGTCAGAGAACTCGCATTGATTGGAATCAGCTTTCTGCCAATTCTCTCCACAAACTCAGACCGACTTAAATCCATGCTGTCAGCGATCGCATCTAATCCATCAATCCCAGTAGGAGTTAGGGCTAGGTTAACTCGTTTCTTCACCTCATCGTACAGTTCTGGTACGTCTTTTTGACCTTTTTGCCCTTTCTTACCCATTGCCATCTACTTTTTACATTCCTCCCAATCATAGTAAACACATTCAGCACTT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 166427-165018 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000013.1 Anabaena minutissima FACHB-250 contig13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 166426 37 100.0 36 ..................................... AGTAGTAGTCTGAGCGAAAGCAGTGCCAGGGACTAA 166353 37 100.0 35 ..................................... ATTACCTCTGATTGGTATGGACTCCTAACCACATC 166281 37 100.0 36 ..................................... TTGTATCTAGATGTAATCCGCGAACCTCGCAATAAG 166208 37 100.0 33 ..................................... AGCTTCGCCCCCGACAACCTGGGAGCATACGAG 166138 37 100.0 32 ..................................... ATTTTGTGCCAACGCACAGATAAACTGTTTGT 166069 37 100.0 34 ..................................... ATATTTTGCCAGCCATCACAACACTTACGTAAAT 165998 37 100.0 44 ..................................... TTTAGTCTTACGCCATCCATTACAGGCGATAGTCCGCCATCGTT 165917 37 100.0 34 ..................................... ACTGTACTGCGTGGCATCTGCCTCTGGGGAGCAA 165846 37 100.0 34 ..................................... AGCTAATCCCTTAAAATGGGCAAATGAGGAGCTA 165775 37 100.0 35 ..................................... AATTTTCCACGGGCCATCCGGCAGCCAGTCCCAGA 165703 37 100.0 33 ..................................... CCTCGTTAGCAATAGCAAACGACCAAGGTTGGC 165633 37 100.0 34 ..................................... GTACTGAGTGCGATCGCAAATTATATAATCTACC 165562 37 100.0 35 ..................................... GCTCTGAGCGGGTTTCCCGCTTGGGGCTTTACTTG 165490 37 100.0 39 ..................................... TTGATTTCTCCTTCACAGGCGGCCATGTGCAAATCAAAA 165414 37 100.0 36 ..................................... CTTCTTTGCCCAGCGAATTGTTCACACTTCCCTAGC 165341 37 100.0 35 ..................................... TTTACCTGCCATCTCTATACCTGTGGTACTGGATA 165269 37 100.0 34 ..................................... TGTACACCAGAAGAAACTAATAATTGCTTGTCAA 165198 37 100.0 34 ..................................... ACTTGGCAGTAAACCTTGGGAACATTTTGTATTG 165127 37 100.0 36 ..................................... AATTATTCTTAGATATTCAAACCATAAACCGGATCT 165054 37 67.6 0 ........................T.ATCCAGCTTTT | ========== ====== ====== ====== ===================================== ============================================ ================== 20 37 98.4 35 ATTGCAATTTCACTAACTCCCTATCAGGGATTGAAAC # Left flank : ACAAAATTGTTACAAAGTGTCAATAGGACTTGACAAAAAATAGTGGATGACTGTAATCACAACTACTTATCTTGGGGCATTTTCTGAGAGGAAAAAAGCGATCGCATAACCGCCCAGCGTATCTGAACCCCTACTGTGGGCGGGTTCGCCATCGCACTCCGCGCAGTGTTAGAGGCGATCGCAGGTTGGCATATAGCTTTTTTGCACACATCTACCGATACTTGAAGCAAGTGCTGATTAACAAACGGCTATGAACCCATTTTCTTCGCTGAAAGCGCGGATGGGTGGGTGTTAAAAATTCAATTGGCAAAATAATGGCTGAATTCCACTTAGTACAATACTTTGAAGTAATACTAATCACTTAAATACCCGCGCGTCTTATCTGGACTGGATTTCAGCCATTTGTACCCAATTTCATTAATATGGTTTATACTATGATTGTCGCATTCGCGCATCCGAACCTTGAAAATCTAATACAGAGCGGGTTTTCAGCTACCGCT # Right flank : CGGTTGATTCAGCAAGCCCTATTTAGAGGAATTTAAGTCCACGTTGGTAAATTTCACGCGCATAGTCTGTCCACATTCCTTGTCCCCAATAGCGGAAGCAACTTGTTTGTAGTAAAAGATTGTGTACTAGTGCTTGACGGTATTCAGATGTTTGTGTAATAGATTCTTCTGGATTATTCAGTAGTAAATTATCAAATTTTTGATGAAATAAACTGCTTAATTCATACATGGGAGATAAGACATTTTCATATCCTTTTACCCAACTAATATGATTCGTCCAAGATGCTCCATCCATGTGAAAATTTGGATTAATTTGTTTTAATTCTTGGATGGCATTTTCTACAGCTTCAGTTTGACAATTTTCTGGGTTGACTCTTTGCCATATTTGGTGTTGTCCTACTGGTTGACACTCCGGGAAGTCTTCTAATTTACAACCAGCATAGGCGATTAATTCTAAATATTCTGTGCCGCACACTCCCACAGTTCCCGATTTACCGCCG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACTAACTCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 92631-91657 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000010.1 Anabaena minutissima FACHB-250 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 92630 37 100.0 36 ..................................... GAAGCAGCAACAGGAGTAAAAGAACCCGCAAAAGTA 92557 37 100.0 37 ..................................... GTGGTATTGCTTTAGTCCCTGGCACTGCTTTCGCTCA 92483 37 100.0 34 ..................................... TAGCTCTATCCGGTATATTCTTTCTCTTCTCAAA 92412 37 100.0 34 ..................................... AATTTATCACGCACGGTTTGCACGAAACTTGAAA 92341 37 100.0 34 ..................................... GAATTTACAATCAAAGCTCTAGAGAAGATTCAAT 92270 37 100.0 38 ..................................... TAGCTACATAGATAGCACACTCTAGCGCGTCCATAAGG 92195 37 100.0 34 ..................................... ACATAAAAGTAAGTGTAGAAGGAGATAATAAAGA 92124 37 100.0 33 ..................................... AAGCCCCACATCATCATTGATAACACCCGTAAC 92054 37 100.0 35 ..................................... CAGTTCCCTGTAATTGGCGGCCAATTCCTCACAAA 91982 37 100.0 34 ..................................... CATTAGAAATCGACCACCAGCTAGAAGGATAGTA 91911 37 100.0 36 ..................................... ATTAGAAAAAAAGGAATCTAAATAATGGCAACTACG 91838 37 100.0 34 ..................................... AGAATAAATTCGACTGGTCAAGAAATGATTGACG 91767 37 100.0 37 ..................................... CCGTTATTACCATACGCACCTACAGCCGCAGCACCAC 91693 37 81.1 0 ........................T...T..AATTG. | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 98.6 35 ATTGCAATTTCATTAACTCCCTATCAGGGATTGAAAC # Left flank : ATGAATGTTGTCATTTCTTACGATATTTCAGAAGACAAGCGGCGTACCAAAATCCACAATATCCTCAAGTCTTATGGGCAGTGGGTGCAGTATAGTATATTTGAGTGTCAGCTAAATGATACACAGTATGCTAAACTGCGATCGCGCCTCAATAAGTTGATTAAAAGCGATACTGACAGCATCCGTTTTTACTTCTTGTGTGCTTGCTGCTTTGGTAAAGTTGAACGTATCGGCGGCGAACCAGTCCGCGATGACACCATTTTCTTCGCCGAATGCGCGGATGGGTAGGTGTTGAAAAAGCAGTTTCTACAAAAATGGTTGCAACTCTCTCTGTATAAGACTTTCAACTATTAACTCATGTTAAAATACCCGCGCTCCTTATATAGACTGACTTTCAGCCATTTTGATCTTGCTGTTTGGCGATCGCTTGTGTTATCATTCCACTATTCGCGATTCCGTACCTTGAAAACTTCATATAGCTTGGCTTTCAAGCTTCCGCT # Right flank : GTTCTTCTTTGCGTCTTTGCGCCTTTGCGCGAACCATCAAATAGTATTATTCAGCAACACCAAAATATTGATGTAACAGATCAAATTATCATAAGAGAAGGGCTAAAGCCCTTACTACAAACGAATATTGGGGAATTGGAGATGAAAATACATTACTTGCAGCACGTTCCCTTTGAAACACCTGCCAGTATTGAAAAATGGGCATTAGAACACAAACATTATCTTTCCGCCACCAGATTTTATGCGAACGAATCCTTCCCGCCAGTGGAGGATATTGATTGGCTAGTGGTGATGGGTGGACCAATGAATATTTATGAAGATAATCAATATCCTTGGTTGACACAAGAAAAGCGATTTATTGCCCAAGCAATCCAAGCCAATAAGACAGTAATTGGGATTTGTTTAGGTTCGCAGTTGATAGCAGACGTTTTAGGCTCTAAAGTGTACCCAGGAGAGAATAAAGAGATTGGTTGGTTTCCCATTGAACTAACAAATGAAGC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCATTAACTCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 19815-19112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000031.1 Anabaena minutissima FACHB-250 contig31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================== ================== 19814 37 100.0 35 ..................................... CCTACTGGAAATGCCACTGCTTGTGGTGGCCAATA 19742 37 100.0 32 ..................................... AACGCGAGGAGTACCACCATTCACTAATTCAG 19673 37 100.0 33 ..................................... CTCCCAGACGTAACAGGTTGATTGAAATCTATA 19603 37 100.0 40 ..................................... GGCTTCAACCTCTACAATATCTCTATCTTGCAAATCGATA 19526 37 100.0 32 ..................................... ATGAATATCTGGCTGACTACCCAGGGCAACAG 19457 37 100.0 35 ..................................... ACACATAAAATACCCCCAAGCTGAATGTGGTAGTT 19385 37 100.0 36 ..................................... TTAAAAAGAGAGAGATATATATAAGCCGTACCACAG 19312 37 100.0 34 ..................................... TCAATGGCTGCAATCGCTAAATATTTAGAAATTC 19241 37 100.0 56 ..................................... TGCGGTTATTGAAACTGCGGTTGAGGCTTTAGCAGTGCGATTGTGAACCTACCGGA 19148 37 97.3 0 ......................G.............. | ========== ====== ====== ====== ===================================== ======================================================== ================== 10 37 99.7 37 ATTGCAATTTCTTCTAATCCCTATCAGGGATTGAAAC # Left flank : AATCTTTATAAAAATTTTACTAGAAATTGATTATTTCCTGAAAAACAGCTAATTTATTCACTTTTTCTGTGATTCAGAAGACTTTTAGTTACAATTACGGTTGAAAAACAAAAGCCTAAACGCTAGTGATTAGTATTATTACTCAGCACAGATTTACAACTCGCTACGCTAACATAACTCAGCATGATGTATTGATGTCAGATGGTGGCTTTGTTGAATCTGTACCGTACTAGCTAGTCAATAACTTGATAAAAACAGTGTTTTCCCGCCCGAATGCGCGAATGGGTAGGTGTTAAAAACAAACTCTTATTAACTGACGCTGGAGTTCTCGCAGTGTAAGACTTTTGAGATTTTTTTGAATAAAAATAGCCGCGCACTTTATTTAGTAAGGGTTTTGGGCATTTGTATTCTACTCAGTTACAATTGTGTATGCTAGTATTGTTCCATCCGCGCAACCGCACCTTGAAAACTAAATATAGACCGTGTTTCAGGTCGCCGCT # Right flank : TATTCGTATGGCTATAAGCTTTTAGTTTTAACTAAGAATAATTATGCATCCAATGATAAATTAAATCGATTGTTTAACTCTACTAATAACCATTTTTGGAACATATTATTAAGTATCTCTTGATATTTTTCACCTGTTAATTCAGCAGGCAGAAATTCTGCTACTATCAAAAGGTGATAACCATATTCAGTCTTTAAAGGGCCAATTAATTGTTGAGGCTGAGACCTAAAGACAACAGCAGCTATATCTTTAGGAAGGTTAAAGCGATATAGATTCCCCTCATAACCACACTTTTGTTTACGTAAAATATCTATATCGTAAAGATGAGCAGCTTCATAAAAACTAATTTCTCTATCTTCAATTTGATAATAAATTTCTTGAGCAAGTTTTTCAGAGTCCACAATAATTTGATAGAGAATAACTTGCTCAAACTCTAGTTGATTTTTATGAAAAAAAGCTTCTGCTTCTTCCGCAAATAATATATTAGCTAATTTTTGAGA # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCTTCTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 1443-140 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000044.1 Anabaena minutissima FACHB-250 contig44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 1442 37 100.0 37 ..................................... TTATCTGAGTTCAGAAATGGGATAGCCAGACATCGGC 1368 37 100.0 37 ..................................... AAGCATTGCCTTTAGCATCGATATCCGCCGAAGCAAA 1294 37 100.0 42 ..................................... TATTCATGGCTGTTTTGATAATTGCAGTTAGCAAACTTTCAG 1215 37 100.0 35 ..................................... TGGCCTTGCACTTTTAGCAGTATCTTACCAGTAGC 1143 37 100.0 36 ..................................... TATGAGAGGCTTTTAGAAACCTCACGCGACGTAGGC 1070 37 100.0 37 ..................................... TTCTCCTGAAGTGGAAACCCTCTCTCAAGAAATAAAA 996 37 100.0 38 ..................................... ATATCTTGATATCATTCTAATAGAAAACGAGAGGCTAG 921 37 100.0 37 ..................................... AGGCGATATAGTAACACGCGTCAAAATAGCTAGTAAT 847 37 100.0 39 ..................................... TCTCGAAGAGAAGCTGCACTCAAGCAAGATCAACTCCGA 771 37 100.0 36 ..................................... AATGCTAGGGTCGGTTTAAACGTTTCAAGTAGTGAC 698 37 100.0 39 ..................................... ATACCACAAGCCTCATCTTGAATCAGCAACAATTTCTCG 622 37 100.0 40 ..................................... GAACATTTATGACCGTCTACCGCGTAGCACACCCATAAAG 545 37 100.0 37 ..................................... GTACTCATGACTTTACTAATAAGAAAATGTACCTGGC 471 37 100.0 36 ..................................... AAAACTTGTTAGAAAGATTTAAAGGATTTAAAGCTA 398 37 100.0 38 ..................................... ACGAAAATAACAACAATAAACTTGAGATTGTGGCTATT 323 37 100.0 35 ..................................... TTCTCCTACTTGATGAGATAGTCGGGATAATTGAG 251 37 100.0 38 ..................................... ACAGATGTAAGAGTCTATAGATTTGCAAGTGTAGGAAA 176 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 18 37 100.0 38 GTTTCCACAAACCATTACCCCGCAAGGGGACTGAAAC # Left flank : TTATCTGATTATTTATGATTTGCCTGACAATAAAGCGGCAAATAAACGCCGCACTCGGTTGCATAAAATGCTTTCTGGATATGGCAAATGGACGCAATACAGTGTATTTGAGTGCTTCTTAACATCAGTTCAATTTGCTACACTACAAACAAAAATAGAAAAACTAATCAAACCTGAAGAAGATGCTGTACGGATATATGTGCTTGATGCAGGTTCAGTGAAAAGAACTATTACATATGGTTCGGAAATTCCTCGACAAGAGCAAATAATCGTCTTATGATGAATGTAGCAACTTGATGATTGACTAGTCGAAGCGGGGTCAAAAACCCTGGGGACTCGTCAAAATTGCCAGAACCTAGACAATATAATAATTACAGTGTTTTGAGAATTAGGGAAGTTGCAAAATACTTGCAATAAGAGGGGCTGAAAATGACCAAAATTTCCGACCCGTCAGAATGCTTCCCAGGAAGCTTGCCCCGTAACAGTTTCAGCACCGGGCA # Right flank : CCAAGAAGAATTGGTGCATCTTCTAATCTCGACTTTATCCATTTTTCGCTGCGGGTCATCACCAATGTAGGTGATCGCGAAAAAATGAGGTTTTTGCTGCATACATAAAATTTAAATACAGTCTTGGTAAATACTGGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACAAACCATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA // Array 2 18931-19855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000044.1 Anabaena minutissima FACHB-250 contig44, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 18931 37 100.0 38 ..................................... ACAGGAAGTTCTTGTTTGATGAGACTCAGGAGCAGGAG 19006 37 100.0 38 ..................................... CTATTAAAAAGTATTCCTAAAAAGTCAGAACACGTATT 19081 37 100.0 40 ..................................... CTTAGAGGTATCTTACACAAATGATAATTTTGGTTGCTAT 19158 37 100.0 37 ..................................... ATTTGACCCCAAACGTCTGGTCTTTCTAAATCGCAAT 19232 37 100.0 35 ..................................... TATCGAATCGTTAGGCGAAGAAGACCGAGTAAAGG 19304 37 100.0 37 ..................................... CAGCGATCGCTCAAGCTCAAGCCGATGATTTTATGGC 19378 37 100.0 34 ..................................... CTTTCGCAAAACCTATTCCCGGTGGTGAATTAGG 19449 37 100.0 39 ..................................... TAGAGAAAACCTGAGTACAATCACATTAACGGAAAACGA 19525 37 100.0 36 ..................................... TTAAGTTTTTCATGATCAGTCTAAATTACAATATGC 19598 37 100.0 36 ..................................... TAAAGAAGATGAAATTGCCGAGGAATTAGACTAAAT 19671 37 100.0 37 ..................................... CTAGCTCATTGTTAACTCAAAACTGAAAATCATGGAT 19745 37 100.0 37 ..................................... AACTCATGGGAACTGAGTACAGAGCAAACAATCAACT 19819 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 13 37 100.0 37 GTTTCAGTCCCCGTGAGGGGATTTGGTCAATGGAAAC # Left flank : GTGGACAATCCACTCGTGAGGAAATTCGACAACGTTTTGGGGAGACGGTTGTGGCAATAGTTGATGGCTGTACCGAATGTAATACTTACCCTAAACCACCTTGGCAAGAACGCAAGAAGAGATATTTAGACAATCTGCGTCATGCTTCACCCTCAGTTCGGCGAGTTTCTTTAGCCGATAAGCTGCACAATGCAAGATCCTTGCTGGCTGATTACCGACAATATGGGAGCAGTATTTGGAGTCAGTTTAAAACTGGTCAAGAGGGGACTTTGTGGTTTTATCGAGAATTACAGAAAATATATAGTGAGAATGGTTCAGACTTCTTGACTGAGGAATTTTCAAGAGTGCTTCAAGAACTTAATCAAAACAATTAGTCCCCCTTGCATGGTAATGGTTTGTGGCAACGCAATCATTTTTACATTAGAGTACGACGAAACTAAACTTGAGTGTTGGTCAATGGAAACCAACGGACTGGACGATTCGTTGCTGGCTATGGAGGT # Right flank : CAGCCCGGTGCTGAAACTGTTATGGGGCAAGCTTCCTGGGAAGCATTTTGGCGAACCTCAAAATTAGGTCGATTTCAGCCGTTGTTATTGCAAGTAATTTGCAACTTCCCTCATAATCGAAACGCTGTAATTATTTACTTGTCAAGGTTCTGGCGTTTTTGGCAAACCCCCAGGGTTTTTGACCTCACTATAGGTCTGCCAAACATCAAGTTGTTAGACTCATCTTAAAACTTTTGTTTCATTTTGTCGAGTTTTCATCCATATCATGTAACATTTTGAACAACTCTAACCTTATGGGTTAATCCACAACTTCAGATTCTTGCTCAATTAAACCCAACACCTTATCCTCCAACGCCGTCAAATAAAATCGCTTCAGCTTCCCCAGCGACTCCAAAAACCTCTGCACAGATTCCTCCAGCTCACTAGAATACACCCTGCTGATGCGATCGCCATTTCTGCTTTTGTTTGATCGCAACGTTACACTAAGCATCACGACTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCCGTGAGGGGATTTGGTCAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 3 24304-21084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000044.1 Anabaena minutissima FACHB-250 contig44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 24303 37 100.0 36 ..................................... ACTTCTGAGCCGCTTTCGCCGACAGAAAACTGATCA 24230 37 100.0 38 ..................................... TTCCCTTTGAATACATAGACCTTCGGATATTCTGAGAA 24155 37 100.0 37 ..................................... ATCAAAACATTTGTTTAATTTGAGTTTCATTTTCTTA 24081 37 100.0 35 ..................................... TTATCTAAAGGGACAAGGTTGTTGATTGCGTCTGA 24009 37 100.0 34 ..................................... CAACTTTTGCGGCTTTACGCCATTTAGGTAAAGC 23938 37 100.0 37 ..................................... ATTTAATTTGGGCTAAGAACATCCGCGAAGTAGTTAG 23864 37 100.0 39 ..................................... GAATTTTCAGCACATCCTCGGCAATAGTTCCAGAAGGAA 23788 37 100.0 36 ..................................... GATTCCTACAAAGGTCAAAGAGTATCGCCGTATTTA 23715 37 100.0 40 ..................................... AGCACTTGAAAATGATCGCAGTGGGGGCAGGGAACAAAGA 23638 37 100.0 37 ..................................... TTCTAACGCTGTCTTGAGATGAATAGATGTTAGCTCG 23564 37 100.0 44 ..................................... TTTCAGATTGATTACTCTGACCCCTTTGTGCTGCACCAAGCTAA 23483 37 100.0 38 ..................................... ATTAAAGCACTTGTTTAGTTTGACTTTCATTTTCTTAA 23408 37 100.0 36 ..................................... AGGACACCAAAGCCAGCACCAACAAAGGAGCTAGAA 23335 37 100.0 38 ..................................... TTGAATATCCAATGGAAAATTATTATATCTCTTTTCAA 23260 37 100.0 38 ..................................... ATTAACACCTATATTTATTATATATCACCCTAATTAAA 23185 37 100.0 36 ..................................... CTTTACTGCACAGATGAGGCATTTATCATCACCCGG 23112 37 100.0 35 ..................................... CCCTTTGCAGCAAGGTTAAATTGAGAGCGAATTAA 23040 37 100.0 38 ..................................... AAATATTTCCAAACTACTGAAGTGCGATCGCTCCACCA 22965 37 100.0 35 ..................................... TTGAATAGATGTTTCTATAGAAGCGGTTATCGGCA 22893 37 100.0 35 ..................................... GCTAGAATAATTTTATTAAACATATTTATTTTCTT 22821 37 100.0 37 ..................................... TTATTTCTATTTGGGGAACACACATAAATCCCACTTA 22747 37 100.0 38 ..................................... CTACTTGGAGGGCTTCAGCCCCAATGCTAATCCTAAAG 22672 37 100.0 36 ..................................... ATACCAGAAGAACCTACTAAAGAAGTTGAACCTAGA 22599 37 100.0 38 ..................................... CCGTCTTCACCAATCCATATCTTTGCGTGTTCTGTAAA 22524 37 100.0 39 ..................................... AATTTCAAGAGTCCCTACCCCATGAAATCCATTATCAAA 22448 37 100.0 37 ..................................... CAACAAACGCAATGAGTTCTTGTCTGTCACGAACGTA 22374 37 100.0 39 ..................................... ACTTTATCTTTACCACAAGATCCAATTACTGTTACTGGA 22298 37 100.0 34 ..................................... TAAACTTTTTCTCCGACAGGGATTAAACAATAGA 22227 37 100.0 33 ..................................... TTTAATCTTCACTCCTTAACCAATCTGGTATAG 22157 37 100.0 35 ..................................... CAGTTCGTTGCTCTTGCTATTTGAGAGAAATTTCG 22085 37 100.0 39 ..................................... AGCCAATATTTGCGATTCCAGTCGGCATCAACAGATAGG 22009 37 100.0 36 ..................................... CTACTGCACCAAGGGGCATCTTTTGGACTTGATCAA 21936 37 100.0 35 ..................................... GACTAACTAACATGACGACTAGCCGACTATCACAA 21864 37 100.0 36 ..................................... ACATACTTTTTGCTCAATGTGTCTCGACTGTATACC 21791 37 100.0 40 ..................................... GTGTGGTTAATGAGTACGAAGAACCGGAGTGTACCGACTG 21714 37 100.0 35 ..................................... ATCACATTAGCTATTACCCGTAAGACCGCTATAGA 21642 37 100.0 36 ..................................... TGTTAACCTCCAAGAAGCCCAAAGAAGCCTAGAGAA 21569 37 100.0 37 ..................................... TAAAAACATCGACGCGTGGGACGTTGTAAACCTGAAA 21495 37 100.0 38 ..................................... ACTGTAGACGTTGACCCTGTACCCCCTTTGGCAATAGG 21420 37 100.0 38 ..................................... AGAATCCACTGTACTTTAACTCCTAGGCACTTAGCGAT 21345 37 100.0 38 ..................................... AGGAAATTTTAAAAATAACAATTAAAAAAATGGCTAAA 21270 37 100.0 39 ..................................... AGCTAATTTCTTGCGGAAATTATCTTTGAATATTTTCTT 21194 37 100.0 37 ..................................... GTAACAAGTTGTTCCTCTGTGGCACTTTTGGCTAATT 21120 37 86.5 0 ........C...C....................GTG. | ========== ====== ====== ====== ===================================== ============================================ ================== 44 37 99.7 37 GTTTCCACAAACTATTACCCCGCAAGGGGACTGAAAC # Left flank : TTGGAATGGAGAACTTACGGTTGGGCTGAAGCACTTGAAATCTTACGACTATCTACCGCAGGACTGTGAAAATATGCAGGTGATCTGCGATCGCGTCAATCGGGTGTATTCCAGTGAGCTTGAAGAATCGGTGCAGAGGTTTTTGGAGTCGTTGGGGAAGCTGAACCGCGCTTATTTGACTGATGTAGAAGGAAAAATATTGAGTGTGATAGAAAGAGAATACGGTATTGTGGACTGAATTAAAGAAAACACTCGACAATAGCAAATACTCATCCTATGATGATAGAATCAGCTTGATGGTTGACAAGTCGAAGCGGGGTCAAAAACCCTGGGGACTCGTCAAAATCGCCAGAACCTAGACAATATAATAATTACAGCGTTTCGAGAATTAGGGAAGTTGCAAAATACTTGCAATAAGAGGGGCTGAAAATGGACAAAATTTCCGACCCGTCAAAATGCTTCCTAGGAAGCTTGCCCCGTAACAGTTTCAGCACCGAGGG # Right flank : GACTATCAGTCGCTCATAAGAGTGAGTATCTGAAAATACTCCTGGTTAATGTCTAAACCAGTACCTACCCGAAGGGGCATTGCGGGTAACTGCGGTGTCTCAGAGCTAGAGGGGAAAGCGTAAAATCTGCAAGCCGAAGTGTGGACGTAACGCCAAGGTAAAACCACTGACGGGTTAACGAAAGTGAACCTTTGACCGAAGAATTCGCAATTGCTTTCCGAAGTTCGTTTGAATAATCATTTCCCAAAACCTTTACTTTTATTTTTCTTTTTCGTCGGTTCAATTACCATTAACTCAGCTGCAAAACCTGCTTCATTTTGCAACATTAGTTTATGAATTCGTTGACGTTGATAAGCTTGTACTTCAGATGCTAGGGGATGATGAAGGTCAATTTTAAGATGAGTAATCGAAGAAACATATTTATCGGGACTTTCGGGATGATTCGGCTCTTTTAGTCCGCACATAATCCCACCTTCATCTCCTGAATAGCCTACAAAGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACAAACTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 203779-203241 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000006.1 Anabaena minutissima FACHB-250 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 203778 37 100.0 37 ..................................... TACCATCTGTCGCATATGGCATAAAAGCGTGTTCTAA 203704 37 100.0 38 ..................................... ACGCAATATGAATTGTAGTAGAACTAGCACCTAATTGA 203629 37 100.0 34 ..................................... ACACAGTTGGGCGCATCTTCCACTACAATTCATA 203558 37 100.0 32 ..................................... TAACCCTTCTAATTGTGCAACCACCTGTAAAT 203489 37 100.0 34 ..................................... AACACCTGCGGGAAGTGCTTCAGATGCAGTCCAC 203418 37 100.0 32 ..................................... TAAATATTCCAGGTATTGGTGATCCAACTCAG 203349 37 100.0 35 ..................................... AAGAAAGCGATCGCAGATGAACAGAAATTGCGTGA 203277 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 100.0 35 ATTGCAATTTCATTAACTCCCTATCAGGGATTGAAAC # Left flank : CCGCCCAGAACACTTGAACTTAGGTGTACCTGCTACTAAGAACTTACAAGTACAAGTAGACTTAGTAGAAAACCTGGGTAACGATGCTTTTATTACTGCAACACTAGTTGAGGAGCAATCTAAATTCGCCCACATCATTAATCCTCTGCAAGTGCGAATTCCACCAGAACGATTAGTCAGTGTAGGTGAGCAACTTTGGTTGTCGCTTACCCCAGATAAAATTCACTTTTTCGACCCAAACACCGACTTAGCTATTTTTCCCTAGTCTTGTAAATGCGCGAATGGGTAGGTGTTCAAAATCGGCTTTTGACAACGCAGGCTGAAATTGCAGTAGCGTAAGGCTTTTGACAAATTTATTGATCAAAATAGCCGCGCACTTTATGTAGTAAGGGTTTTAGGCATTTGTATACTAGTCAACCAAAATTTTTCATGCTACGATTACTGCATTCGCGCAACCGAACCTTGAAAACTAAATACAGACCGTGTTTGAGGTCGCCTCT # Right flank : CAGGACTTACCGCCACTGCAAAGCGAGCCAAGACATTAGACTATAAAATTATACATTCATATAAGTCAATTCTCAGTATATTTAGCATACTAAAAGGCGATCGCCCCTTATCATCTTTTTGGCTAAAAAATCTATCTAATAACTCTTCTCGCGATAGTTGCAGTCATAAAATATCTAGTTTATATCAGCCCTAAATTTTCATGTAGAGACGCAATAAATCGCATCTGACAAAACCTAAGATGTCATAGAGAGAAGCGTTTGCAATGACAGAAAATATTATATTTATTTACACACATCTACTTACTTAGTATATAAACATTTATAAAAAGCCCAAACTTAAGTATTTCATCATACTAAATGGGTGTATTTCCCTTATATAAATTATTTAAGAGAATATAACTGCTATGATATAGATACAGAACAGCGAAAACGCTACACATTGTAAGGCAGCCAAGATGGATGCTCAATAGGGTTTTAAGGTATATGTAGCCAGGTAAAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCATTAACTCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 15010-15990 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000063.1 Anabaena minutissima FACHB-250 contig63, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 15010 36 100.0 33 .................................... GTTGGCGATACCTGCGTTTTATCGGTTTTGGAA 15079 36 100.0 35 .................................... ATCAAGGCTCGTGGGGCCACTATCCACCGTGTGCG 15150 36 100.0 35 .................................... GCCACCATCCACCGTGTGCGTGGTCTTTGCCGAAG 15221 36 100.0 39 .................................... CCTTTGTTCTTGGATGCATGCTATCCAGTAGCTACGCAT 15296 36 100.0 34 .................................... ATTAAGGCGTGATTTTTATCAGGTCCAGAAAAAT 15366 36 100.0 42 .................................... TCCATACCCTTAGGCACATTTTCCTGGATAACCACTGCTTCA 15444 36 100.0 34 .................................... GGACTCCATGCCCATCTCCGACGAGCGACTGCAA 15514 36 100.0 37 .................................... ACTGACTATCCCGACCAGTTCAAGCATGATCCTGGGC 15587 36 100.0 37 .................................... ACTGACTATCCCGACCAGTTCAAGCATGATCCTGGGC 15660 36 100.0 38 .................................... TATCAACTGGTCGTCTGCCCCAAACACTAGCTTCCGCA 15734 36 100.0 37 .................................... GGTCCGGGAAACCTTTTGTACATTTTATATGTATTTG 15807 36 100.0 38 .................................... ATTGATGATCACTTGGTCGGTAGTCCCTAAAAAGTAAC 15881 36 91.7 38 ..........CG.C...................... CTTGCAATGGAGTTGCCCTTACCCCGTAAATCACTATC 15955 36 94.4 0 ..........CG........................ | ========== ====== ====== ====== ==================================== ========================================== ================== 14 36 99.0 37 CTTTACCGATTACTTAAAATCGGAATTAATGGAAAC # Left flank : GTAATAATTCTTCATTGGAGGAGTAAGGATTTATGTAATGTTGCATGAATTGCTGTGACATTTATATCTTCTCGGAAAAATTGAGAATGTAAATAGGTTTTCATGCGAATGACGAAATTTTTTGGCGTGACTAAGTGAAAGGCTAGCCCAAGTCCAGCTAACACGCATACTGCAAGCGGAACTGGTAGGGGAAAACTCATGAGTAATGAGTAATGAGTAATGACCATTGACTTACACCCTTTTATCCAGTCGTATTAGGAGTTTGGGCTTAACAAGTGTGTCGTTTAATGCGGAGAGGATGAGGTGTTTGAGGTTTCATCGATACCACTCGCCAAATCGCTGAAACCTTATCTTTTTTGTTGAGTGGTGTCGATTGCTTATTGGGTAAGGATTTTAGGGATGTGTTTTACTCAATTTCGCACAACATAGTATAATGTTTTTCAGAGTGGTGTCGATTTGGCGGCTGAAACCCTTACGGGGTAAAGGCTCCTGAACGAACT # Right flank : CGCTGTAACTGAATCTAGGACTCGAAAATCAATTCCGAAAACTTTACCGATCGCCTAAAATGCTAAAATTTTAATTACGAATTAATTCGTTGTTCGCTTGAAAACCCTAGACAACAAACAAATAAAGGCTAAAAGTTAAAGTAGAAAAACTTTTAGGCTGAAATTTTGAATGATTTGTCACTTCCTCATTGGTGTCCCTGGTAGCGGGAAATCCACCTTCGCCACAGAACTAGCAAAGCTGGGGAATTATCGCATTGTCTCCACTGACGCAATTCGCGCCTCACTATACGGCGATGCAAATATCCAGGGGGAGTGGACAGAGATAGAGAAAGTTGCTACCTCTGAGATTGTGAATACCCTGGCTCAAGGTGATTCCGTAATTTATGATGCTACTAATGCCAAACGTGCGTGGCGGATAGATTTGCTAAGGAAGCTCATTGCTTCCCTACCCCAGTATGGGGATAAAGTTATGTGGATCGGGTGGTATTTGCAAACCCCTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACCGATTACTTAAAATCGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 18434-18832 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000063.1 Anabaena minutissima FACHB-250 contig63, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 18434 36 100.0 34 .................................... GAATGATGTGTGGTGAATTGTCTAGTAGGTGAAT 18504 36 100.0 38 .................................... ATAAATCAAAGCACGAAAGTAGAAAAAGGAAAAGTTTT 18578 36 100.0 36 .................................... CATGCGTACATCTATACCTAGAAAGTATATAAAACA 18650 36 100.0 40 .................................... CTTACGGGCTGACGTTATTCACCCCGATAACGATGCCCAC 18726 36 100.0 35 .................................... ATGATTTAAAAGCTGCATCTTCAGGAGCTTTTGCG 18797 36 97.2 0 A................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 6 36 99.5 37 GTTTCCATTAATTCCACTTCATTGAATAGAAGTGAC # Left flank : ATTTATCGCTGAAGGTACTAAAAGATTTCCACCGCAACAGATGAAAATGTCTCTTCCTGGAGAAAGTGGGCATTCAAGGTTGCCTAAGTCGATTTTCTGCCTGAAGAAAACGCAGAATAAATGTTTTCCTAATCGCTTTCAATTGGTATTACCTAAATGGTATTTGGGTGATGTAGAGTTTCTGAGATGGATTGTTGGATTTGGTGGTAATGTTAGGGTGGTAAAACCTGAAGAGTTAATTATTAAAGTAAAAGGAATGGGTGAGGCGATTTTCAAGGTTTATGAATAATAATAAATAAAAATTTATATATATTTGGTAAGGGTCGGGATGTTGATATCTCGACCTTTTTATTTTGATGAATATACTTGTGTGAGTAGGGGTCAATACGGTTCAGTTAAAACTAAAAACCTGATTTTGCGTAGATTGGGTTGAGGAACGAAACCCAACCCAATCTACAATTATCCTACTTTTGCTGACCTCTTCGCCTGGAATTGCTGGG # Right flank : CCCACCCCTATTTAAACCCTTACAGAGCCTAATGTCCAGATGCCATTTGCGGCCGGGTCGATAAATGCAGCAAATTTTGCATCAACCGAGAGAATCAAAACGCCTAAAAGCCTTACACAGAAAGACATCGGCCGCCTCAACGAAAACATAAGCATTTCCAGATTTTCGCCACCCCGGCGCAGAAAAAACAGAACAATAGGAAAAATTCGTCATTCGCATGAAAATACTAGCATCATCCCAAACTAGCCCTTACCTTAAGACATAGAACAAATTCGCACAAGCATCAACCATAAAACTTATGTATATCTCCTCCCGTGCTGCATTAGTTCGTAACTTTGGAGTAGCCATACTTAATGGCGGTATCACTTTAATTATCCTATTAATCGCTCCCTTGGGACTAGCAGCCGTCATCATCAATACAATCTTAGTCACAGTAGCCAGTTTTGTTAACGCCACCGCCGGCGATGCTGTAGTTAATTTTCTCCAACCATCACAAATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCCACTTCATTGAATAGAAGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 12912-13166 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRG010000064.1 Anabaena minutissima FACHB-250 contig64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ================================== ================== 12912 39 100.0 34 ....................................... AACGCAAACATACATGAGTTATGAGGTGAGAGTA 12985 39 100.0 32 ....................................... TCTAAATGCAGCCAGTCCTCCTGACTCATCCT 13056 39 100.0 33 ....................................... GGAAGAATCGGGCGATCGCCCATCTTGTAAAAT 13128 38 84.6 0 TG................-..TT..........A..... | T [13140] ========== ====== ====== ====== ======================================= ================================== ================== 4 39 96.2 33 ATATTGCAATTTCACTAACTCCCTATTAGGGATTGAAAC # Left flank : TGAGGATCATGCTAACGCTGTGCTGCTTTACGCACAATTTTTTGGCGGAGTTTCCCAAGCAACCGCAGCGCAAATGCTAGCAATTGATGCTCAAGGTATGGACTTAACCGCACAAACCAATGGTGAAAGTCTCCCTGTTCGCATCCAGTTTGATCATGTTTTAGCAGATTCAGAAGATGCTCATCATACTTTGATTGCAATGGTGAAGCAAGCACGGGTTGAGGCGAAGGGTTAGGGACTTGGGAATGGGGATTGGGGAATTTTCTGGTCTGAATGCGCGAATGGGTGGGTGTTCTAAATCAGGTTTTCGCAACCAAAGCTGAAATTCCATCTGTGTAATACTTTTAAGAAATTTATTGGCAAAAATAGCCGCGCACTTTATGCAGTAAGGGTTTTAGATATTTGCATACGACTCAATCACAATTTTCTATGCTACGATTATTTCATCCGCGCAACCGAACCTTGAAAACTAAATACAGAAAGTGTTTCAGGTCGTTGCT # Right flank : CTTCAGCTTGTAACAACCAAAAACCACTATAGGTCATCCCAGAATCATCAGGTTGGACTATTAAAAAATGCAAGCCTCGGCTGTGCTGTTTGCGCTGTTCATAAACTTTTGCTGCCGCCGCTACTTCTGGATCTTCAAAAGTAACCAAAATCCATCTATCTACTAAACCAGCTTCTAAAACTAAACCATCTGGCGCACCGGCAATATAGTTGAGTGATACAGGATGGGCTGATTGTATCCATTGTGCTAGACGAAGCGATCGCCTGCCGCCAAAAATCACCACACCAGGAACGGCTACAGTTGATGCTAAACCCAGATTAATCGGTTGCAGAGATTCTGGTACAGATAAAATTGGTATGGGGCGATCGCTAAATAAATCGACAAGATCACCAGCCGGAATTGTTGCAAACCGCCACTCTTCCCCCCAGAGGGTTTCCGGTAATGGTACAGGAGGTGGCTTATCTATAGCTAAGGGATATTGCTTTTCTTGTAACCATTGT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTGCAATTTCACTAACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //