Array 1 4616303-4614027 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134303.1 Shewanella putrefaciens strain NCTC12093 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 4616302 37 100.0 34 ..................................... ATAGTTACCGTCCCGCCTGTTTTGCCGTTATTGA 4616231 37 100.0 32 ..................................... TATCTTTCTTTTTCTTGGTATTCAGGGTATTT 4616162 37 100.0 33 ..................................... CGCACCTTGGTCTATAAAGCGAGTGATACCTTT 4616092 37 100.0 33 ..................................... TTGTGGGCGACCTAGGGCGATACATACCGCTTG 4616022 37 100.0 33 ..................................... GTAGATAAATCTTCAAGACGTTTCTTAATGAGA 4615952 37 100.0 34 ..................................... AGTTGGACATATTTCTCAGGGGTCTGGGTTTCAT 4615881 37 100.0 31 ..................................... GGTGAAATCAGCCCTAACCGTTCGGGTTTAA 4615813 37 100.0 33 ..................................... GATGCCAAAGGTCTTAGTCGGCCCCCTTTAACC 4615743 37 100.0 34 ..................................... TTAGGCTGCCTTGATGTAGACAGTGCGCATCATG 4615672 37 100.0 32 ..................................... TTAGCAAAGTAAGATGAAACGTGTCCGACTTC 4615603 37 100.0 36 ..................................... AGAAATCCATATAGATGAACGCGATACTGCCTTAGC 4615530 37 100.0 33 ..................................... GGGCCGACCACACGCAGCACACCATGGCGTTAC 4615460 37 100.0 33 ..................................... CCAACCAATCCCGTTGGCTACGGAGTGCTTGCG 4615390 37 100.0 31 ..................................... ATTACGGAGATTTAACGATGACAACTTTTTT 4615322 37 100.0 31 ..................................... GCGAATAAATCATCAAAACAGCACCTGCGCA 4615254 37 100.0 33 ..................................... ATACCGCGGTGGATCAAGTAATCGATGGTAAGT 4615184 37 100.0 35 ..................................... CCAATCCCTGAGCTACGGGGATTACCTGTGGAGCT 4615112 37 100.0 31 ..................................... GAGAATCAGTAAACACCACAATAGCATTTAT 4615044 37 100.0 31 ..................................... CTTGAAGGGTAGACGCCGTTACCAATGACTT 4614976 37 100.0 34 ..................................... CACACATATGCTAATAACGCTTGTATGAGCCTCT 4614905 37 100.0 34 ..................................... TACGACAACAACAGGTATCCGAACTCAGCTTCGA 4614834 37 100.0 33 ..................................... TGATTTACGTTGAGCGATTGCTAAAGATACTTC 4614764 37 100.0 35 ..................................... CCATTCCTACTACGGGGTGTTTAGTTGCATAGAAC 4614692 37 100.0 33 ..................................... AAGTAGCCATGAGGCTGAGACTACTACTCCTAC 4614622 37 100.0 34 ..................................... ATAAGCACAGTTACCTATACGTTTGTGGAAATAG 4614551 37 100.0 32 ..................................... GGTGGTTTGTTTGCTTTTGGGAAGAACTCTAC 4614482 37 100.0 33 ..................................... ACTTTACATTTGCAGCATATGCTGATGCTGTGG 4614412 37 100.0 33 ..................................... AGACGAACGTTAACGATAGGAGCGATAGTGTCA 4614342 37 100.0 34 ..................................... GATTAGCTATTAACCTTTCTTGCTTTGGATTCTT 4614271 37 100.0 32 ..................................... AGTTCGAGTAGCCATGATGCTGAAACTACTAC 4614202 37 100.0 32 ..................................... AATTTGAAGTTCGGCTCGTAGTCGGCATCAGC 4614133 37 100.0 33 ..................................... AGTCATCAATAGTCATACTGTTGGCACCTTAGC 4614063 37 91.9 0 .........................A....C.T.... | ========== ====== ====== ====== ===================================== ==================================== ================== 33 37 99.8 33 CTCTGAAAGACGCCCCGCCATTTAAGGGGATTAAGAC # Left flank : ACGGATTAACACAGGGGCAATACACCCTATCAGAGGCAAGCGCATATGAACTCAACTGAGCATTGGTATCTCATCTGTTACGACATCCGCAAACCGCAGCGTCTACAAAAACTGCAGCGTTATCTGCGCCGCTGCTGCCTAAAACTACAAGACTCGGTGTATTTATTTTGTGGGAATTATCGTCAAGGTGAACAATTACGCCAAGCAATTAGCCAGCGCATTAGCCGCAGTGTAGATGATGTCAGAGTTTACCAACTGCCTTCCCAAAGCCAATTTAAATTTTACGGCCAACTACCTTGGACTGTGGACATCTTTTATCCCGGATTGCCGTCATTTAGCCATACCCCAGCGACAGTTGCCTAACCACAGGGAAACCGTTAAAGTGAAACCTCTAGAGCCTAAACCCAATCTATTTTCCGAGCCACTTTTATGCTCAAAAAACAGTCAGTAAAATTTAAGCGTAACTATATTGATTTTAAAAAGGAAATTTTTTGGTTAGA # Right flank : TGCTGCTTGGCTCGCCCTAAACGGATGCACGATCTAAAAGCTAATAGAATTATCCACTAATACAGCCTTTATAGTGGCTTGAGCTCCCTATGCCACTTGCGATCACAAGTTTGTGAAACCACTGCAAAAGTCTTGATTGATTCATCATCTGACCACTTACTGAAAGAGGAAAGATGATGCTAGTGTTAAATCAATATGCTTTTGCCCCAAAGACTGGCAGCGATCTGACATCGTCACTGCGTTCGCGCGGGATTCAACGACTGCTGCACTTTACCTTGGTTGACAACTTAGCCAGCATCATCAAATATGGCCTCTTGGGGCGCACCGAATTGGAACAAAGACAACTGAACTACATTTATACCGACAATAAGCGATTAGACGGTAATCCTAATGCTATCTGCCTGAGCATCACCTCACCGAATTACAAAATGTTTTTCAGTAAGCGCAACTCATTTAGCCAATTGGGATATCAGGACAGTGACTGGGTCGTAATTTTGTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGAAAGACGCCCCGCCATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 4626450-4625296 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134303.1 Shewanella putrefaciens strain NCTC12093 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 4626449 37 100.0 33 ..................................... TGTTTTATCAATAGTACTGAATACACGTACTAC 4626379 37 100.0 33 ..................................... TGCTTGATTTACTTCGTGAGCTGCTGCTTGGCT 4626309 37 100.0 33 ..................................... CCAGCTACCTACCATCACGCCTAGCATCACTCG 4626239 37 100.0 34 ..................................... GATATTCCAAGTAGACTTCTCTTGTTCATACTTC 4626168 37 100.0 33 ..................................... AAACTTAGTGAAACTGAATGCATTATGCTTTTC 4626098 37 100.0 34 ..................................... GAAGCTCTGAGTACGCGGTAAGGTTAAGCTGTAA 4626027 37 100.0 32 ..................................... GTTCCTCACAGATAAGACGGATTGTCTTATAG 4625958 37 100.0 32 ..................................... ACTAAAAAGGTTATTGAAGAAGCCAATGAAAT 4625889 37 100.0 32 ..................................... GTGTATCCGACCTGCACTGTAGCTGATAATGC 4625820 37 100.0 33 ..................................... ATCGAAGTCGTCGGCCACTATCGCGTCGTACTC 4625750 37 100.0 33 ..................................... GTAGCGCTGATATTGGCAATATGTGTGTAGTTG 4625680 37 100.0 33 ..................................... CACTTGTTTTTCGATGTCAGTTGGATTTTTTGA 4625610 37 100.0 33 ..................................... TAGATACTTACCCGCATGATTCATGGGTGTTGG 4625540 37 100.0 31 ..................................... ATTGTTCGGTCTTCTTGTAAGACGCAATGGT 4625472 37 100.0 32 ..................................... GTGAGAACATCCCCGGGAGATAGGTGTATTTT 4625403 37 100.0 33 ..................................... TTACCGACATCACTCGGTGAGAAGTTCTGACGG 4625333 37 86.5 0 ...........T......G....T.....G.....T. | T [4625299] ========== ====== ====== ====== ===================================== ================================== ================== 17 37 99.2 33 CTCTGAAAGACGCCCCGCCATTTAAGGGGATTAAGAC # Left flank : ACAATTACTGGACAAACCCATTACACCCCACGATGCCGACAGCTACCACTATTGCCGTTTTGTGCAGCAATTGATGAAAGTCAAAATCGCTTTAGGTTCACCGCAGTTGACCCAGAGTTAAGGACTTAAGTCACCATCAGAGAGTATGCAAGACTCGGTGTATTTATTTGGTGGGATTATTGTCAAGGTGAACAATTACGCCAAGCAATCAGACAGCGCATTAGCCGCAGTGTAAATGATGTCAGGGTGTACCAACTGCCTTCCCAAAGCCAATTTGAATTTTACGGCCAACTACCTTGGACTGTAGACATCTTTTATCCCGGATTGCCGTCATTTAGCCATACCCCAGCAACAGTTGCCTAACCACAGGGAAACCGTTAAAGTAAGACTTTTAGAGGCTAAACCCAATCTATTTTCCGAGCCACTTTTATGCTCAAAAAACAGTCAATAAAATTGCTTTGTAACTATATTGATTTTAAAAAGGAAATTTTTTGGTTAGT # Right flank : ACACCGGATAAAAAATGGTCTGCCCTGCACAAAGGGATTTAACCCCTGAAAGCCAGCAAGTCAATCGCATTGCTATATCTTGATTATCTTGATTGCCGCCACTGCCATAGCAGCAAATGACCTTAGTTGATTAATCCAGCCCTACTTAATCCCAGGCTTTCCCTGTTCCACTGAGCCGCGACAACGATGCTCACCGCCCAAGCCCACCACCTCGCCAAGCCCATCATGCCTGACCACGCCAGACAAGTTTGTTTAAGCACTAATCTGTAAATCAATAGCTTAATATCCTTCCTATCGCAGCCACTCTAGATAATCGAGTGACAAGAAGCTGGCAAGGTGATGATTCTGGTATACGCCATCGAGTTAATCACCCGGAAAATCCAGACAAGTTTGTCTGAACCATAGCTTCTACATCTAGAGCTTAATATCCACACCATCGACACAGACACAGAGGCACGCCACATGATGACACCCAATTACAGCAGTCAGTTCAGTACATC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGAAAGACGCCCCGCCATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //