Array 1 252025-254214 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADDWJ010000001.1 Acinetobacter sp. Marseille-Q1618, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 252025 28 100.0 32 ............................ GCACAAGTTGTTATTAGTTTTCCGAATAAAAT 252085 28 100.0 33 ............................ ATACAGCCCCCAGTAAGATAAGAATTGGTATCC 252146 28 100.0 32 ............................ AATTGAACTAACAGTAGTCACACCATCAGTAA 252206 28 100.0 32 ............................ CAGTAGAAAGGGTGATTGCTCACCCTAATATG 252266 28 100.0 32 ............................ ATTCATTTAAAGTTAGTGCTCCACCGATAATC 252326 28 100.0 33 ............................ GGTCGAACAAAAATATGAGGGAGAATTTTTAAA 252387 28 100.0 32 ............................ CTCTTGAGGACATTCTTGAGCAGATTTATCAA 252447 28 100.0 32 ............................ CTGTAGTCCAATCAATCATCCGAGCTAATGTT 252507 28 100.0 32 ............................ CAAGACCTGCACCAACGAGCAATTTTTTAAAT 252567 28 100.0 32 ............................ CTCCCCAGGTTTACCGATATGTGCATATAACA 252627 28 100.0 32 ............................ ATTCGGATTTTTATGTAGGTTCTGTAGGTGTG 252687 28 100.0 32 ............................ TTGCGACATTCAACATTAAGATCTAAAGCGGT 252747 28 100.0 32 ............................ TTACTAAAGCTGCTAATCCCAAGCGCTCAAAC 252807 28 100.0 32 ............................ CATTTGAATACTTTGCCTGTCACTACTAATGA 252867 28 100.0 32 ............................ TCCAGTTTGTTGTAAACGATTCCTGTGCGCCC 252927 28 100.0 32 ............................ TTGCTGTGTATAAGCAACATATCGCCCATTTT 252987 28 100.0 32 ............................ GTTTGAAACAAGCTTCTATTCAGTAGATGCTG 253047 28 100.0 32 ............................ AGTATCGCAATTTAAATACAAAATAGCTTAGG 253107 28 100.0 32 ............................ CCCCAGTTTTATTTGGAGAATCATTTGTATAT 253167 28 100.0 32 ............................ GTTTGAATAGATTGCGTTCTAAATGAGATCGA 253227 28 100.0 32 ............................ CGTTGGTCCTGCTGATTGATCTAACAGCTTTA 253287 28 100.0 32 ............................ AATAGAGCTTACAGTTGCAACTGTACCTGTAA 253347 28 100.0 32 ............................ AGTCTCATTTGGTTTTGTTTCACCTTTTGCAG 253407 28 100.0 32 ............................ CGTATTTTCCTACAGAGCAACCCACCCCCGTA 253467 28 100.0 32 ............................ TTTTTCGTAGATGCGACAAAATTTTGATGAGG 253527 28 100.0 32 ............................ TAGAAAAGTTTTATTGTGGGGTCTTGCTCCTT 253587 28 100.0 32 ............................ TGTGTTTTCAGGCTGTATGATGAAAAATGGCA 253647 28 100.0 32 ............................ TCAAACATTCGAATTAACCCTGTGGATGCACA 253707 28 100.0 32 ............................ TGTGCAAATTCCTTCTGCTACAACTTGCACCA 253767 28 100.0 32 ............................ GTTCGCTTCTAAACAAATGTGATTATTCACTA 253827 28 96.4 32 .C.......................... AGTGCCGATCCCACCAGTCGTTAATCTAATTT 253887 28 100.0 32 ............................ AATTTAAATTACCATTAGGTGTATCAAAAGCT 253947 28 100.0 32 ............................ AGTAAGCGTACATATCATAGAAATATGAAATT 254007 28 100.0 32 ............................ ACAACAGCACGATAATTCGTATGTACAAGACT 254067 28 100.0 32 ............................ TTTACAGATTTTATCTTATTTTAATTTTTAAA 254127 28 100.0 32 ............................ TGCATCATATTAAATCTAAATTTCCTGAGTCT 254187 28 71.4 0 ...T......G.A..T.A.......TGC | ========== ====== ====== ====== ============================ ================================= ================== 37 28 99.1 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTTGGTGATTGGGGCTTTTGTAGAGGCGCGTTCTTGTGAGCGTTTTTATGCTTTAGCGCCTTTGGTGGATGAAGAACTTGGGCGTTATTATCGTTATTTGCTCAAGTCAGAATCTCGCCATTATGAAGATTATTTGGCTTTGGCTTTGGATGTTGCGAAGACAGCTAAACTCAAAGACCCTGAAGAAGATATTCAGCAGCGGATTGAACATATTCGTGAGGTTGAAAAGAACTTGATTTTGGCAACGGATGATACGTTCCGTTTTCATAGTGGTGTGCCTGAAAAAGCTTTGGCTTAAAGTTAGTCGATTTTTAAAGAAAGGAAGTGTTTATACTTCCTTTTTTTATTTTGACAAATGCATACTTTTACCCCAATATTTTAGACACTCTTTAACAGTTTATATAAATCAATGACTTATAAATTGAATAAAAAATTTGGGTAATTTGAATCTTTTTAAATTAACTCTATGTTTTTATTTTATTTATGGTTAAAATTTTACT # Right flank : CAATGGGCCAATAATATGAGAAAGCCTATTTCTATATGAATAGGCTTTTTACATACCTTCCGATTGAAATGAATTTTTAATCGTCAGGTCTTTTAAAGAAGAGCAGCAAACCAATGAGTGTTAATAGACCTGTTTTCATGAAGAAATCTTTATTGAAAGAACCAAATTGTTCATAAGCTCCTTGTGCAATAGTTAAATAACCCATGAGATAGATAAGAATATATAAATTAAAACCATACATATACGCGATAGCTGCAAATGCAATACACAAACATCCAATGACCATGTAATTTATGTCCCATATCATTGTGTTAATGATCATGAGAAATAGTAGCCCTCCACCAATACTTAAAGCTGATCGACTTGCGAAACCACTATTTGTATGGAATCCATAGAAGAGTGCAAAGGGTAATAGCAGCAATAAATACTTAAACCAAGTCATATATTGTTGGGTGAGCAAGAAACTAATTTTATTGGGAGTAATTGGATTCTCACTGAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 481686-479075 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADDWJ010000001.1 Acinetobacter sp. Marseille-Q1618, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 481685 28 100.0 32 ............................ CGCAAGTGTTTGAGCATTTGCAAAAGTAGGTG 481625 28 100.0 32 ............................ GGATGCTCTTGCTGCTGCTGCAAATAAATACT 481565 28 100.0 32 ............................ TGAGACTTTTGAGCGCATGGCAATCGTTGAGC 481505 28 100.0 32 ............................ CAATGATTCGCAAAGCAGTACTCACTATACCC 481445 28 100.0 33 ............................ TGTTGTATTTAAAGCACCTGCATCAATGACACC 481384 28 100.0 33 ............................ TGTTGTATTTAAAGCACCTGCATCAATGACACC 481323 28 100.0 32 ............................ ATTATCGAAATGCAGAGAGTTGATAAGCGGAA 481263 28 100.0 32 ............................ AATCGTCAGGCGCTTGTAGAATCCCTGTATGT 481203 28 100.0 32 ............................ TTCTTGTTGTTGAAACTGATTTTGATTCACTG 481143 28 100.0 32 ............................ AATAAAACTAAAAGTGACCTTGCTAAAACTCA 481083 28 100.0 32 ............................ ATTCGGTGTATCAAAAGCTAAACCGTCTGATT 481023 28 100.0 32 ............................ AGTAATACTGTTTGTCATCCTCAACAGTTGTA 480963 28 100.0 32 ............................ AATCCACATGGGAAATACCGTCTTTAGCTGGG 480903 28 100.0 32 ............................ AGTCGTATGTGAAGCTGCACAAGTTGTTATTA 480843 28 100.0 32 ............................ TTAGCAAGAACTTTAGAAACTTGTGAAGCAGT 480783 28 100.0 32 ............................ TCATATACATCATCTTAAGTACTCCTTAGAAT 480723 28 100.0 32 ............................ CGCGGATGTCGGGCATTTTTTTTATCTCAAAA 480663 28 100.0 32 ............................ TCTACCTCTACCGCCCACGCATTAATATCTAA 480603 28 100.0 32 ............................ TTTTTTTCCAGTGATTAATCGTAATATTCCAC 480543 28 100.0 32 ............................ ATATAGTTCTTTAGGATGTGCAAAAACATATT 480483 28 100.0 32 ............................ AATCCAACCAATCTTTAACTTTTTGAAAGAAT 480423 28 100.0 32 ............................ TGCAAGACCTAATATGCCTGCAACATCACCCA 480363 28 100.0 32 ............................ TCATTATTCAAAGCATCAATCTCAAATACTTT 480303 28 100.0 32 ............................ ATGATGAGGCTGTAGTTTGAGCAATTCGATAT 480243 28 100.0 32 ............................ AGATGGGACAATGGTAGTGGAGTAGTCTCCAT 480183 28 100.0 32 ............................ ACCATAAAGCAGGCATGAACCGTTTGAAGCAC 480123 28 100.0 32 ............................ ATCGAGTACTGCACCAATTCGCCAGTAATACT 480063 28 100.0 32 ............................ TACAAAATACATGGGTCAGTGGTCTGACTGTG 480003 28 100.0 32 ............................ TGCAGGTGTGCCACGCCGAAGTTTTGTTCCCG 479943 28 100.0 32 ............................ TGCGTATTACGTGATTAAAAAAGGTTTTTCAA 479883 28 100.0 32 ............................ TGTATCAGCTACAAGCGTTTCACGTAAAATTG 479823 28 100.0 32 ............................ ACAGAACGCAAACCTGCAGGTGCACCATTCAC 479763 28 100.0 32 ............................ ACTTAAAATCAAAGCAACATTTTCTTTATTAA 479703 28 100.0 32 ............................ AGGGAATACATATTTATTATCATCAGCTAGAT 479643 28 100.0 32 ............................ AACATGATTATCTTCGTGTACTTGGTTGTTAA 479583 28 100.0 32 ............................ GTATCAATTCCTCAAAAGCTCAACTGGTGCGT 479523 28 100.0 32 ............................ TTATGGCACAAGGGTTTTAAGACATTTCAATG 479463 28 100.0 32 ............................ GTTCGTGATTATTTCAAAGAAGAACCAACTAA 479403 28 100.0 32 ............................ CCGTGATCAATATGAGTTTGAAAAAGAACTCA 479343 28 100.0 33 ............................ AAACGGGTCAGTATTGGTTTGGGATGAAGCTCA 479282 28 100.0 32 ............................ ACCGTTAGACATAGTAGAATTCATTTTATTAG 479222 28 100.0 32 ............................ ATCTGACCTTGCGGTTCTAGTGGCTCATGTGC 479162 28 100.0 32 ............................ TGGCAATTCTCTACAGATATATTCGATGGTTC 479102 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 44 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TTGTCGGACAATATGCATTTATTTTTAAAATTCTGACAAAAATATGAAAATACAAAACTTCTTTCAATTATTTATTTTATTAAAATAAACAAAAACTTATAAATTTTATACCTATATTTGATACATAAATACGCTCTAGATTTTTTAATATGAATCCTAGATAAGAGATTATTCAGGAAATAAATATTTGTACATCAATAGTGCTATCATCCCAAAATTAGCACTGACAAGAGACTTTTCCGCGGTCATTTCATTTTAAATTTGCACTCAAATCATCCTTTGTGATCCTCAACTTATGTAAGAATACACTGATCATAAGATAATTTTTTGAAATAAGTTTAAAAGTGTTTTGACAAACCTAAGTTTTTACCCCAATATTTTCTTACTCCTTAACATTTTAAATAAATCAATAAGTTATAAAACTACAAAAAACTTTGGGTGTTTTGTTATTTTTAATACTAACCCACTGTTATTTTGATGTTTTATTGCTTAAAATTACT # Right flank : TAACAGGATTATTTAATACGAATTCAATTCAAATAGATTCCATCAATCACTATTAAAATCTACCTAAAATGAACTCGCATGTTGAAACAAATTTAGAAACGCCAGTGATAGAACAAGTCAATAGCTTTTTCCAAAGACTGACTTGCTTCTAGATACAATCGTTTGTTCATTTGATAACGTAAAGTTAACTTATTCACTGGTGTAAATACCCCAACCCCATAACGGATATACAAATCAGGGGTGATATAACCTGTTAAGCTGACTTGAGTATCATCCCCTGTTCCTTGCGCATCAAAGGCTAAACCACTTAAACCAAAAGTTTGTCCTATTTGGTTAGTAAAGGCACGTGTACCGCCCAAGCCTAAGCTGATTCCTGCTGCTGCAATGGTATTATTCACATCAGATTTAAAGCCCGCTTCATTGCTTAAACCGCTTGAACCTTCATTGATTCGTCCTGTGATTAAAGCATTCATCGCCTCTTGATCAGACAAACCTGCATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1295395-1295188 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADDWJ010000001.1 Acinetobacter sp. Marseille-Q1618, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1295394 28 100.0 32 ............................ AAACTTCTTCTATGATTTGAGGATAAATTAGA 1295334 28 100.0 32 ............................ AGTAATGTAGTGTAATTCTTTAAATAAAGCCA 1295274 28 100.0 32 ............................ TTGCACAGTCATCAAAGCAGTCAATACAGCTT 1295214 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTCACCGTACATTTCAAACAATCACAAGTGATGCAAGCGCAGCCACAGGATTTAAATATTAATGTACGTTGTATTGCTGCATGTCATGATTTGGTGTCATTAGATAGAGCTCAGAAATTAGGATTTGAGGCCGTGTTTTTAAGCCCAGTTTTAGCAACACAAACTCATCCTGATACAAAGACGCTTGGTTGGGATGTTTTTGAAAATTTGGCGAAACAATCAGCAATTCCAGTCTTTGCTTTGGGTGGTTTAAAGCCAGAGGATTTAGCGAAAGCACAACAGCATCATGCTTATGGTGTAGCTGGTATCAGTGCATTTTGATAAATGATTTATAAAACTCATCGGTAGTGGCAAGGATGCCGCTATGCCAAAGAGCTAAATTGGATTTTTATAAATGATAATAAATGTAGCCTTAAATCACAGCAGATTTTTTTTTAAATGAAAATATTGAAAAACTATATAGAAATTGAATGAAAATAGAGTATAACTTTTAGCGTAAT # Right flank : TAATAGTTCTAGTTAAAAAATTAGATCAATTTAAAGCAAAGATCAAGGCTTAAAGTGCCTTGATCTTTGCTTGTGCTTCGGCAATGGTTTTCGCATTTTGTTGCTGTTGAGCTGACTTTAAAATCGCTGACCATAATTGCTTACGCATCGCATTATTTTGTGCAAAACTTAAACCACGTCTTGCTAAAGACTCCGCATTTTTTGCTTGATTTTTATGATTGGCAATCAGCGCTAACCATAAATAAGTTTCAGCAGATTGAGGAGCTAAACGTTGTGCTTGTAGTGCATAATTTTCTGCTTCATTCCATTTGCTTTGACGAAATGCAGTTTCAGTTTTTTTAATTAACTGATTAAATGCAGGAATATCATGTCCATCATCAAACTTTTGAGCTTGTACTTTTTGCTCAGGCACAATCACTTGCATCGGTTGACGTTTAATTTCAGGGCGTTCATAAGGAATAATTTTTACGCCATCAGGTGTTTCGACTTTAGGTTTTTGC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //