Array 1 1203237-1208553 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGOZ01000001.1 Legionella taurinensis strain NCTC13314, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1203237 28 100.0 32 ............................ GCCAGTGGGAGGCCATTCATGGTAATCATTCC 1203297 28 100.0 32 ............................ CGCACCTTTGGTTCGCTCCCCGGCTTTTGATA 1203357 28 100.0 32 ............................ AGTAGTCCAATCGAGATGATCGCCAGGGATCA 1203417 28 100.0 32 ............................ TTCTACGGTTTTGTTGTCGATGCCCGTTAGTT 1203477 28 100.0 32 ............................ TAGGGCGTGTGGCCGCGGAGGCGCGACATGCA 1203537 28 100.0 32 ............................ ACGCTCATCCCCATCTAGCCACACTACAATTT 1203597 28 100.0 33 ............................ CAAACATAATTTTAATTGTGAGACGATTTAGTT 1203658 28 100.0 32 ............................ TTGCTATTGAGCATGGGGTAATATACTATGAA 1203718 28 100.0 32 ............................ TAGTCGACTCTATTCTACCCCCGTATACAAAA 1203778 28 100.0 32 ............................ ACCAGTTGTAGGGAAGCATTAATGCTGCGCAA 1203838 28 100.0 32 ............................ TCGAAATGGCCAAAAAACTACAAAACGAATAC 1203898 28 96.4 32 A........................... CTCTATTTCAATGACGAGGCAATAAACAATGC 1203958 28 100.0 32 ............................ TTTTGTTTCGCTACGCTAGAAGATGGATTATC 1204018 28 100.0 32 ............................ TTAGAGCTATACGTGCCAAAACAGAAATGTTT 1204078 28 100.0 32 ............................ AGCCAATGACACGTGTTCCTCGACCTTTCACA 1204138 28 100.0 32 ............................ TGCTTGGATCAACGTCATAACGTACAAATCAA 1204198 28 100.0 32 ............................ TTAGAGGTTAATATGAAGAAATTAATATTATG 1204258 28 100.0 32 ............................ CACGTATGCGCATGTTTAATGGCCTTATGTCT 1204318 28 100.0 32 ............................ AAAACAAAAACCCAATTGTTACGCATCCCCAA 1204378 28 100.0 32 ............................ TCTGCAAACACCCGGCGGCAGAGTTTTTCCTC 1204438 28 100.0 33 ............................ CCAGAACGATAACCGGCTTGATGCGCGTAAGCT 1204499 28 100.0 32 ............................ ATGTTTTGCCACGTATGACGATGGGTATAAAT 1204559 28 100.0 32 ............................ AAACTAATTATACAGCTCACGATGACGTCAGC 1204619 28 100.0 32 ............................ TCTAAGAAATGACAACAATTGCTTATAAAGAC 1204679 28 100.0 32 ............................ TACATCAACAGGATGGCTTTCCAAGAATTTTA 1204739 28 100.0 32 ............................ GTGCAACCTGAATATCTTCCGTGCTCACATTC 1204799 28 100.0 32 ............................ ATTAGGAATTCGTTATTCAGTAGCCGAGCATT 1204859 28 100.0 32 ............................ AATACATGAAAGGGCGTGTCCTAGATGATGAA 1204919 28 100.0 32 ............................ TAGATATTTCATTGCTGCAACAATACGGTCAC 1204979 28 100.0 32 ............................ CGTATCCAATTTAATAGAGAGGACCTCTAAGA 1205039 28 100.0 32 ............................ ATCAATGTCTTCATACATGCCGGCATTGTTTA 1205099 28 100.0 32 ............................ ATTTTGTTGTATTCCAGCATGTAGTTGATTGC 1205159 28 100.0 32 ............................ CTAAACGCCAGGGGCACATTAAAGTTAAAGTA 1205219 28 100.0 32 ............................ AATTGCCCCGCAGCCTGCCGCCGACATAACCT 1205279 28 100.0 32 ............................ TATATTTTTGATGGGTGTAAGCTATAGTTATT 1205339 28 100.0 32 ............................ GCCGAATACGATCACTATGCGCGCGCCTTGCG 1205399 28 100.0 32 ............................ GCGGGAACTTCGGGGACTACCACGTTATCAAT 1205459 28 100.0 32 ............................ AATGACTACCTTGAGGTGAGGTATTAATTATG 1205519 28 100.0 32 ............................ ATAGACCAAAACTGTCCCATGTTGGCATATCC 1205579 28 100.0 32 ............................ TCATACTGTAGATACTCACTTCCGGTCATCTT 1205639 28 100.0 32 ............................ AATACCTTTTCCACGGTCCTCTAAAACTTAGA 1205699 28 100.0 32 ............................ AGTAGTCCAATCCAGATGATCACCGGGGATCA 1205759 28 100.0 32 ............................ TGAACTTTTGCTCCCCCACCTTGGTTTGGGTA 1205819 28 100.0 32 ............................ TACAACTGGTGGCTCCAAGCTTGCATGAACAT 1205879 28 100.0 32 ............................ AAGCCCGCTGGGCATTGTTGCATGATGCAAGC 1205939 28 100.0 32 ............................ TCCAATACAGCCTGAATTTAGAGATGATAGGG 1205999 28 100.0 32 ............................ AAAAGCTTGATAGAAAAGCCTATTACGACACA 1206059 28 100.0 33 ............................ ATACAGCGGTGATCAAACAGCCGCTAGTTTATT 1206120 28 100.0 34 ............................ CCGTTTTAATCGGCGGTTATCAATACAGGGAATA 1206182 28 100.0 32 ............................ ATCAAGATAAATGCCGTTTTTCCAATTTGTCC 1206242 28 100.0 32 ............................ CAAAGTTTCGCGCGCGTGCGCGGGTGTTGTAT 1206302 28 100.0 32 ............................ CTTAAAATCGCAATGCCTTTGTCTTGGCAATA 1206362 28 100.0 32 ............................ TCTTTGAATGCTGGCTTGTTATCGATGATTTT 1206422 28 100.0 32 ............................ TTTCAACTGATGCCAACAAAGACGTAGTGAGG 1206482 28 100.0 32 ............................ ATTATGCCTTGGAGAGGGTAAAATTAAAACAC 1206542 28 100.0 32 ............................ TAAGCCAAAAACCCCTGATTCAAACGGAAAAA 1206602 28 100.0 32 ............................ AGCCGCATGCTGCAATTAAAAGCCAGAAACTT 1206662 28 100.0 33 ............................ ACCACCCAATCATTGTTAACAGAGCCAATAAAC 1206723 28 100.0 32 ............................ TAGGTCAAATTGAAATGCTCGACGCTATGGAT 1206783 28 100.0 32 ............................ AGTGTTCCCGCTTAAGCATCTGCCCCACCTTC 1206843 28 100.0 32 ............................ ACAACTCCGATAAGTCGATAGTAGATTTGGTT 1206903 28 100.0 32 ............................ AATATCTTATAAATGGAATACTTAGGGTGAAT 1206963 28 100.0 33 ............................ CACGATGTCCGGCGACCCGACACTAATAAAAGA 1207024 28 100.0 32 ............................ TTAAACGCGCTTATCTCGTCGTTTATATCTTT 1207084 28 100.0 32 ............................ TAACTCCACCGAACCTGACAAAGAGAGGTCTA 1207144 28 100.0 32 ............................ CTTGTCTTCGCAGGCGTGCGCTACGCGATAGA 1207204 28 100.0 33 ............................ CGACGCTGTATTTGTCAGAAGACGACTCAATAG 1207265 28 100.0 33 ............................ TTGAAGAGAAAGTCGGCGATATTTCCCTTAAGT 1207326 28 100.0 32 ............................ ATAACGCTCGCCCCATTTCTTTTGCTGATCTT 1207386 28 100.0 32 ............................ AACATACCGTCACCCCAAAGGCAAGGACGGCC 1207446 28 100.0 32 ............................ TTTATCGGAAATTGCGCCAGACTTATTCCAAG 1207506 28 100.0 32 ............................ TTCTTGCATTAAGAGGTTGTATACTGCCCAAC 1207566 28 100.0 32 ............................ TATTTGTGTTTCGCTCTTTTATTTTCTAGCAG 1207626 28 100.0 32 ............................ AGATACCTGGTTTTTATTCAGTTTACCGAATA 1207686 28 100.0 32 ............................ TGCCCAGGCATCGCATTAACTTGCTCGAGATA 1207746 28 100.0 32 ............................ GATAGGATCACCAGCCGAACCTTCAGCGTCTG 1207806 28 100.0 32 ............................ TCCTGTCCATAATTATTAAAGCACAGCTAAAA 1207866 28 100.0 32 ............................ AGCAATCCCTTTGCTGTATTCATATCTCGTCC 1207926 28 100.0 32 ............................ TCTCGCAAAAAGGGCATCTTTTGTTTTCATCC 1207986 28 100.0 32 ............................ AATATACAAAGATGATCAAGTCGGCGGCATTC 1208046 28 100.0 32 ............................ TATTATCTTGTTCAGACGTTGAAAAGTTCCAG 1208106 28 100.0 32 ............................ TTATCAAAAGCCATCGCATCACGTTGCCTTAG 1208166 28 100.0 32 ............................ ATACATATATGGCGATCACCAAATTTTTATTT 1208226 28 100.0 32 ............................ TTACAATTAGTTCGCATTCGCCGTCTAATTTA 1208286 28 100.0 32 ............................ AAAATCGGGTAGAGGCCATAAGGAAGGGCTTG 1208346 28 100.0 32 ............................ ACTACCTTAAAAAATATAATCCTGAATTGTTT 1208406 28 100.0 33 ............................ ATCATGCCGGGCCAGTTGATCTTTAAATCGTTC 1208467 28 100.0 32 ............................ AAAACATAGAGCCACTGCCAATCGAGTCTTTG 1208527 27 75.0 0 A..........T.T.......-A.C..G | ========== ====== ====== ====== ============================ ================================== ================== 89 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTGTTTGTACAAAGTTCCGCACGGTTTATCGCAAGCAACCGACTAAGAGTCAATCCAAATTAAGAAGGTTAATAGAGCGCAGATCATTAACCGAGGCTCAAATTGATCAATACGAAGCAAGCAGGATTGCAAATTTTTTGGATAGTGCTTATTTCCAATTGGTAAGTGGCTCTAATGGAAAAAAACACCGACGATACATTGTGCTGGGTAAAATACTCGATCAGCCTGTGCCCGGGGAGTTTGATCGGTTTGGTCTTTCTAAAACCGCCACTATTCCGTGGTTTAGCGAAGATTTACCATGATAATACTTTGATCAGTTAAAAATGGGGGGATTACCGTATAAATCAGGCCATCATTTAGCCCTGTCATACCTTTAATTTTTGCTCTTTAAAAATTTCTAATAAATTCAATAGATTAAATCTGTGAGGAAAAGCATTGGGTAATTGAAGAATTTTTCATTAGGTTATTGTTGTTACTCGGTTTGTGTGTTTATTTGTTCG # Right flank : GAATAAAAAAGTGTTTTCAAAAAACAAGAAGCTAAAGGAATAACTCGATCGGTAGTATCTACCCCTACCCCCATCTATGCCAACCGAATCCCTCGACGCGCCATGTGCCTTTGCATCAGAAAAGCAGTAAACCCCATCAGCGCGCCAAGAGCGACAGCGATGACGCCTACCCAGAGGTAATAATACTGGTAAATGGGGAGCGTTTGCTCCGCTGATTTAACAGCTTCGGGGATATCAACCCAGCCTGCCAATTGTCCGGAAATGGCATTGGACAGCGAGCTTGCAAGGTACCAGACGCCCATGGCAAAGGCGATGTTTCGTCCATCGCAATAAAGGCCGATCATGCTTAAGCCGATGGCGCTCACCCATAATTCGGCCAAGGTAATCAGCATGTAGGTAAGCGCAATGTAATTCCCTTCGACATAGCCCTCGACAGCCTGCTGTGAGGCAAAGGCCATGATCAGCAGCGCCAGACCGGACAGGAGCGTTCCTGCTGCGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //