Array 1 36539-37203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQJ010000023.1 Anaerostipes hadrus strain MSK.13.6 NODE_23_length_48914_cov_212.502, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 36539 30 100.0 38 .............................. ACAAACATTACATCGCCGTTTATTGTAGCTGTTCTTAC 36607 30 100.0 37 .............................. AAAAATTATATTGTGATCGATATTGAAACAACTGGTT 36674 30 100.0 37 .............................. TTAGCATTACTTTGTTCATATATCCTCCACTTCTGAG 36741 30 100.0 36 .............................. CATTACGACAGTGGTAATTACACGAATACGCCAGTG 36807 30 100.0 37 .............................. TTGTTTCCGATAAGATTTTCATGCAAGTGTAGTAAGT 36874 30 100.0 37 .............................. TAAGATTGTATAATGTAAGCAAATCTGCCCACACAGA 36941 30 96.7 36 .............................T GAGCAGGAAGCAGGAAATTGAGCATCCCCACTCCAA 37007 30 70.0 58 TT..........T....T.....AA..TTA TATTGGAAATATAGATATGGTATAAAAGTTATTATTAGTTATATAGTAGGCTCAATCT 37095 30 86.7 48 .........C...A.........G.C.... TAAATTTGGGGGGATATTATAAAAAACATGAAAACAGAATTTTTATGG G [37123] 37174 30 73.3 0 A..A........TTT..T..A........T | ========== ====== ====== ====== ============================== ========================================================== ================== 10 30 92.7 41 GAATTAATAGAAACATAATGGAATTTAAAG # Left flank : GGAAGGTGGATGTGTTGGTGAATAAGAAGGATCTGTCTAAGGTTGAGAGGAGTCAAATTGAGGATATTGTTGTTAGGAAGGTGGGGTGCCAGTTGGGGGATGTGGTGATTAGTTCGATTAAGACGGAGGAGTAGAAGTGTATATGGAATAGAGGGTTTGGGTTCTCTCTGGATGATGTTCTTGGGTAATTTTGGAATATTGTTCAGAGAGAATTTTATGTTTATATATGGATTTGTATATTAGGGTTGCATATTTGATTGATTGGATTCATAATAGGAAGTGTCAAGCTAATAAAAAACTTGATATGATAAAAATATAATGATTTCTGTCGACCTGTGATAGTGTAAAAAACGTAGGGAATCGACAGAAGTAAAAAATGGCTAAAATAGGAGGTGTTGCTAAAACATATGATGAAGAGTGAGAAAGAAATGATATATTTTGAAGAGGTCGACAGAATAAAGGTGTTTCGTGGAGTAAATAAGCAGTTGGTTTTGGGACGG # Right flank : TTAGTATAAAAAGTTTTCCAATATGGACGATTAATATTAAATTTCATTGGTATAATTTAAATTTCAATATGAAAAATTACATTGATATTATAATAGATAGATTTACAAAAAGCAATAACAAAATAAAATATAAATATCATTAATATAAGGGTTGACTAAATATAAGTGAAAGAGTATTCTAAAAACAGGAAGGAGAAATAACACCTATGCGTTTAGAATTACAGATGGAATTATTGAAACCAGAGATAGATATTGATTATCGTAGAATCATAATATCTTATCTAAAATTTGCATTAGAACATTGTGAAGGGGGAAGATTTTTCGAAAAATTTTATAAGAATCGAGATAACATAGTTAAAGATTATTGTTTTTCAACAGTTTTTAGTAAGCCACGATTCACGAAAGAAAAAATTTATTTTGATAAAAATGAAATGAAAATCATATTTTCATGCAGTGATAGGAATCGAACAGGATTAATTTTCCAGACAGCATTTTTAGCA # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.64, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATAATGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 3767-498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQJ010000055.1 Anaerostipes hadrus strain MSK.13.6 NODE_55_length_10252_cov_244.53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3766 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [3748] 3696 30 100.0 36 .............................. GTTGTTTGCTGCTTTGAACATTTCTTCTGATATAAT 3630 30 100.0 34 .............................. AAGATAGTCAATAAGTTCAAATGGATCAGAAGTA 3566 30 100.0 37 .............................. ACTAATGGGAAGACTGACTAGAAAGCCGGACATAAGT 3499 30 100.0 36 .............................. TCAATGTACGCCATGAAATCACTCCTTTTTATCCGT 3433 30 100.0 34 .............................. GGATCAATCGTTGCATATAAGGACTCTCATTAAG 3369 30 100.0 36 .............................. AGCTTTATAAGATTCAAGAGCTTCGATCACACATCT 3303 30 100.0 36 .............................. GCAGATAACCTTTTCAAATGAGGGTAATATAGCAAT 3237 30 100.0 35 .............................. CCTAAAGTGTATTTTAAAATTTCTCTATATTCTTC 3172 30 100.0 35 .............................. CTAATCACCTTTCCTTTTTACAAAATATTAAAATT 3107 30 100.0 36 .............................. CGAAGTAAAAGTAATTGATTGGGAAGCAGGAAAGCT 3041 30 100.0 35 .............................. CTAATTAGAAAAGGATACGACATTTCGCCATATCT 2976 30 100.0 37 .............................. AGATTGATTATGTGCGTTGTACTGGGTTTATTAAAGA 2909 30 100.0 36 .............................. TTGGAAGTATTGATAGAATCCCCTAACACCTTTGAG 2843 30 100.0 36 .............................. GCTATGGTTCGATGGAGTTAAGGACCTTCTGGACGA 2777 30 100.0 36 .............................. GACTGCGATCGGAGACATTCGATGCAAGTCAGGATA 2711 30 100.0 36 .............................. CACGTATGCCACTTTATTTCGCTTTATTCCAATCAT 2645 30 100.0 37 .............................. TGAATGTAACCGAAATCATTACGGGAACGCGTATGTT 2578 30 100.0 36 .............................. CGTTACTCGGAACGAGTGTTGAAGAGCTAAAAGAAA 2512 30 100.0 37 .............................. TAGAAAGCTTAAACCAGTATGGAGAAAGGAAACAGAA 2445 30 100.0 35 .............................. GATTTTTGTATCGCAACATCTAACAATTATGTTTC 2380 30 100.0 37 .............................. AGATGAAGAAAAGGAGGAAAAATAAATGTCAGCAGCA 2313 30 100.0 35 .............................. GAGATTCAAAATGCTATCAATTCGTTAGCGTCTAC 2248 30 100.0 38 .............................. GCACAGTTTGAGGGTATATTTAATGTTACGATACCAAT 2180 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 2115 30 100.0 36 .............................. GATTGAATCTTTTGAATATGGAGAGGAAGATAGTAC 2049 30 100.0 37 .............................. ATAAATTACATATCAAATTTACGATCATAACGGACTA 1982 30 100.0 35 .............................. TCCGGCTCTGCTTTCTTCTTAATTGGATCAATAAA 1917 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1849 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1781 30 100.0 36 .............................. AAAAATAGCAGAAGAAGCAAAAAAACAGTGTATAGA 1715 30 100.0 36 .............................. AGAAGATAAGATTAATCATACGACAGAGTTAGACGA 1649 30 100.0 35 .............................. ATGATGATCGGGCGGAGTATCAATCTATCTGCGCT 1584 30 100.0 36 .............................. AATGAAAGAATTAGAAATGAAGGAGGACTTAAACGA 1518 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 1453 30 100.0 35 .............................. CGGATTAGCAGCCAGTATCGCATCTGTAATTATGA 1388 30 100.0 37 .............................. AAAAAAGGAGTAAACGTTGAGTGACTATATTTACATA 1321 30 100.0 36 .............................. TATGAGCGAGCTGATGAAGAAATACGGCTACGAGAA 1255 30 100.0 36 .............................. GTATTGGCTAGCGTAGTTGCCTACTACCTATGCAAA 1189 30 100.0 36 .............................. AAAAGATGCACTTGTAACTCAATATGCCGAATTGAA 1123 30 100.0 35 .............................. TTACTCATATCTTCTTTCAAGACATTTAAAACCAA 1058 30 100.0 35 .............................. CGAACGCTGTGATCGATTACGGACGAGAAAAAACA 993 30 100.0 39 .............................. CTATCCTCATATTCACAGCCTTCATCAGCATAAGACTCT 924 30 100.0 36 .............................. CTCTGATCACGAATTGGCGGTGCAAATACCTTGTAC 858 30 100.0 36 .............................. ATATACGAAGTAAGCATCGGGAACGATGATAATTAT 792 30 100.0 37 .............................. GATGGAAATGCAGCAGCTACAAGCTCAATGTCATTTA 725 30 100.0 37 .............................. CTTCTGGAACAAAAAAACAAGTTGTAATCCCAACACT 658 30 100.0 36 .............................. AGGAGCTTCAGGAGAAGTATGATCTTCTTGATGAAA 592 30 100.0 35 .............................. AATTTACATCTAACACAGTTTGTAGATTATTTCAC 527 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 50 30 99.9 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCCAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATCGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAATTACTCAACTATTATTATACTTATTTTTAAATTCATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACGGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7113-7412 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQJ010000014.1 Anaerostipes hadrus strain MSK.13.6 NODE_14_length_67685_cov_224.267, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7113 36 100.0 30 .................................... TAAGTTGTTTCTCTTATCTACTCTAGTAAT 7179 36 100.0 30 .................................... GCATTAACGGTACCGATGCATACTGGTGTG 7245 36 100.0 30 .................................... CTAAAATCATGGGAAGTATCCCATACCCTC 7311 36 100.0 30 .................................... TTTAGAAAATTCATTCGATATACCGTCTAT 7377 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTTTGTACCTATGTTATTCCTCATAGGTCTAAACC # Left flank : ATTGTAAACTAATACCTTATAAGTATAACAAATTCTGTTTGATTTTTCAATATATGAATAAAAATAGTGAAATTTATAAAAACTATTCTATATTTAGTATATTAACTCGATCTATAAATTCTTTCATATCTTCCACATACTCATATGGAGCATATTCTGAATATATATCTGGATCATCTAAAATAACTATTTGCACCCCTTCCGCCCTTAATGCTTCCAATGTTCCTGGTAAACATCTAGCTTCATTTATTGTCTTACATCTATATGCTATGCAACCTTGCTGATCAAAAATTTTAGCTATTACATATATTGATTTATTGATCATTTTTTTCTCCTTCCAATTCCTTTAATGTTTTTACAAATTCTTCTTTATTCTTTATTTCTTCTTTCATATATTTATGTTATTACTCGCACTAATCTAGTAAAGATTCACTTTTGAGGATTTATACCTATGTTATTTCGTATAGACCTTCTTTCTGAACAGTGTCAAATATTTCTTT # Right flank : CCTCAAACATAGATTTTAGTGAGTGCTTTAAGCCTCACCATTTGGTTGCAAAATCAACCATTTTATATAAAAATTTTTATTACTATTTATGACTAGCTTCTCAAATTATTTTGTATTTATATTATGCTTTTGACTATATAATCATATAACATTTGCATTTTTAATATTTTTGTTAAGTTATGAATGCATTTTATAAATTTTAATGAGTGTCATATAACCTCACTTTCAGCTGCAAAATCAACTGTTATCTTATTTAGTATACTATGAATTTAGTAATTTTTCTATTTATTTTTATATATATCAAACTTTTTCATAAAAAAAACCAGAGATTTCTCCCTGGTTTTTTGTAACAGATAAATTTTTATGAAGATATTCTGTTAATTCAGTTTTTTGTTATTATTTGCTTTCTCCTATTCTCATAACCTTTCCTGTAGAATCATCTATAGAAAGCTCTTTTTCTAATTCCATTTCATAAAGATACAGTTTTTTTTCATTTACAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTACCTATGTTATTCCTCATAGGTCTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.20,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //